FFCP PHASE1:Mm9::chr12:8928493..8928510,+: Difference between revisions
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{{FFCP|EntrezGene=17775|HGNC=|MCL_coexpression_id=0|UniProt=Q8BG66|association_with_transcript=137bp_to_ENSMUST00000171078_5end|description=CAGE_peak_2_at_Laptm4a_5end|id=chr12:8928493..8928510,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000708,5.16e-10,2;CL:0000878,6.34e-10,2;CL:0000129,6.34e-10,2;CL:0002453,6.00e-09,8;CL:0000680,1.96e-07,6;CL:0000187,1.96e-07,6;CL:0000056,1.96e-07,6;CL:0000333,3.48e-07,10;CL:0000095,3.48e-07,10;CL:0000243,3.48e-07,10;CL:0000123,3.48e-07,10;CL:0000125,3.48e-07,10;CL:0000030,3.48e-07,10;CL:0000339,3.48e-07,10;CL:0000192,3.71e-07,3;CL:0000359,3.71e-07,3;CL:0002539,3.71e-07,3;CL:0000514,3.71e-07,3;CL:0000151,5.99e-07,3;CL:0000499,5.99e-07,3;CL:0000327,5.99e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005156!1.17e-07!26;UBERON:0000990!1.17e-07!26;UBERON:0003133!1.35e-07!24;UBERON:0000991!3.77e-07!18;UBERON:0005564!3.77e-07!18;UBERON:0004176!6.03e-07!17;UBERON:0009196!6.03e-07!17;UBERON:0009117!6.03e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0003210,5.16e-10,2;UBERON:0001135,3.71e-07,3;UBERON:0004237,3.71e-07,3;UBERON:0004695,3.71e-07,3;UBERON:0002111,3.71e-07,3;UBERON:0004178,3.71e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.140788722151667,0.468129052643987,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0,0,0,23.4719480816953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39203954153597,2.12891555560981,0.367093504323363,0,0.218025156380447,1.09843091367236,0.58328969722285,0.279972843250725,1.43752564364972,0.167782606057736,0,0,0.257259436035947,0,1.54701627683233,0,0,0,2.03306719241479,1.77858959222228,0.449949858640699,0,0,3.29560121570245,1.15265491596466,0,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0.153606533256243,0.131886287730194,0,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0.757261933331841,0.982430281388212,0.869593466105033,0,0.679971333707751,0,0,0,2.10666630197628,0.340860645156116,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0,0,0,2.2836775943812,0,0,0.346970653532272,0,0,0,0.23517741427141,0.251333182659351,0,0,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0.359445373517761,0,0,0,0,0,0.173824320192276,0,0,0,0.305518091550949,0.373220911830279,0.252722758433675,0.210441855886474,0.390361328888111,0.229902104433473,0.360124259610698,0.30140963567143,0,0,0.187403449119458,0,0.215567992932842,0.567318240503458,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0.469052119962192,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0.639864751605702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,1.1270773567308,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.318909537314974,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0,1.33679204449436,0.566153061577665,0.404810701674894,1.75353514746787,0.395287777946524,0.642642632843614,0.567760340833074,0.35613120733451,0.325773918707152,1.31976098378028,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0.720244376125241,0.258717367565509,0.428674070063185,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0.120625849856312,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0.228778173206523,0.169978429993855,0,0.138199973804424,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0,0,107.101658349996,0.149516546043979,0.165458490457098,0.388902376688095,0.387479470433193,0.844780627453891,0.352071715937262,0,0.209718688851422,0.724752362478018,58.4700912703467,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.179427713218951,0,0,0.187682475451182,0.549454872801795,1.2862102744744,0,0,0,0,0.343706364687375,0,0,0,0.45032120322422,0,0,0.415149390336707,0.798049746802062,0.341467211508268,0.486213434136588,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.280924522409647,0.128050304809739,0,0,0,0.38581844092741,0,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.169229215783353,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.385813221962283,0.249810577937946,0.233931608445408,0,0.191288332068843,0.220591419119515,0.463735671240843|short_description=p2@Laptm4a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:17775 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BG66 | |||
|association_with_transcript=137bp_to_ENSMUST00000171078_5end | |||
|cluster_id=chr12:8928493..8928510,+ | |||
|description=CAGE_peak_2_at_Laptm4a_5end | |||
|id=chr12:8928493..8928510,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,5.16e-10,2;CL:0000878,6.34e-10,2;CL:0000129,6.34e-10,2;CL:0002453,6.00e-09,8;CL:0000680,1.96e-07,6;CL:0000187,1.96e-07,6;CL:0000056,1.96e-07,6;CL:0000333,3.48e-07,10;CL:0000095,3.48e-07,10;CL:0000243,3.48e-07,10;CL:0000123,3.48e-07,10;CL:0000125,3.48e-07,10;CL:0000030,3.48e-07,10;CL:0000339,3.48e-07,10;CL:0000192,3.71e-07,3;CL:0000359,3.71e-07,3;CL:0002539,3.71e-07,3;CL:0000514,3.71e-07,3;CL:0000151,5.99e-07,3;CL:0000499,5.99e-07,3;CL:0000327,5.99e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!1.17e-07!26;UBERON:0000990!1.17e-07!26;UBERON:0003133!1.35e-07!24;UBERON:0000991!3.77e-07!18;UBERON:0005564!3.77e-07!18;UBERON:0004176!6.03e-07!17;UBERON:0009196!6.03e-07!17;UBERON:0009117!6.03e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,5.16e-10,2;UBERON:0001135,3.71e-07,3;UBERON:0004237,3.71e-07,3;UBERON:0004695,3.71e-07,3;UBERON:0002111,3.71e-07,3;UBERON:0004178,3.71e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0.140788722151667,0.468129052643987,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0,0,0,23.4719480816953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39203954153597,2.12891555560981,0.367093504323363,0,0.218025156380447,1.09843091367236,0.58328969722285,0.279972843250725,1.43752564364972,0.167782606057736,0,0,0.257259436035947,0,1.54701627683233,0,0,0,2.03306719241479,1.77858959222228,0.449949858640699,0,0,3.29560121570245,1.15265491596466,0,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0.153606533256243,0.131886287730194,0,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0.757261933331841,0.982430281388212,0.869593466105033,0,0.679971333707751,0,0,0,2.10666630197628,0.340860645156116,0.259786004602869,0.35333957451034,0.14084341977668,0,0,0,0,0,0,2.2836775943812,0,0,0.346970653532272,0,0,0,0.23517741427141,0.251333182659351,0,0,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0.359445373517761,0,0,0,0,0,0.173824320192276,0,0,0,0.305518091550949,0.373220911830279,0.252722758433675,0.210441855886474,0.390361328888111,0.229902104433473,0.360124259610698,0.30140963567143,0,0,0.187403449119458,0,0.215567992932842,0.567318240503458,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0.199034266818493,0,0,0,0,0.469052119962192,0,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0.639864751605702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,1.1270773567308,0.203651327845314,0,0,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.318909537314974,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0,1.33679204449436,0.566153061577665,0.404810701674894,1.75353514746787,0.395287777946524,0.642642632843614,0.567760340833074,0.35613120733451,0.325773918707152,1.31976098378028,0,0,0,0.188605079755898,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0.720244376125241,0.258717367565509,0.428674070063185,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0,0.120625849856312,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0.228778173206523,0.169978429993855,0,0.138199973804424,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0.134864346384821,0,0,0,0,107.101658349996,0.149516546043979,0.165458490457098,0.388902376688095,0.387479470433193,0.844780627453891,0.352071715937262,0,0.209718688851422,0.724752362478018,58.4700912703467,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.179427713218951,0,0,0.187682475451182,0.549454872801795,1.2862102744744,0,0,0,0,0.343706364687375,0,0,0,0.45032120322422,0,0,0.415149390336707,0.798049746802062,0.341467211508268,0.486213434136588,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.280924522409647,0.128050304809739,0,0,0,0.38581844092741,0,0.294397840268795,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.169229215783353,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.385813221962283,0.249810577937946,0.233931608445408,0,0.191288332068843,0.220591419119515,0.463735671240843 | |||
|short_description=p2@Laptm4a | |||
}} |
Revision as of 11:10, 5 August 2015
Short description: | p2@Laptm4a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Laptm4a_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 137bp_to_ENSMUST00000171078_5end |
EntrezGene: | 17775 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 5.16e-10 | 2 |
central nervous system macrophage | 6.34e-10 | 2 |
microglial cell | 6.34e-10 | 2 |
oligodendrocyte precursor cell | 6.00e-09 | 8 |
muscle precursor cell | 1.96e-07 | 6 |
muscle cell | 1.96e-07 | 6 |
myoblast | 1.96e-07 | 6 |
migratory neural crest cell | 3.48e-07 | 10 |
neuron associated cell | 3.48e-07 | 10 |
glial cell (sensu Vertebrata) | 3.48e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 3.48e-07 | 10 |
glial cell | 3.48e-07 | 10 |
glioblast | 3.48e-07 | 10 |
glioblast (sensu Vertebrata) | 3.48e-07 | 10 |
smooth muscle cell | 3.71e-07 | 3 |
vascular associated smooth muscle cell | 3.71e-07 | 3 |
aortic smooth muscle cell | 3.71e-07 | 3 |
smooth muscle myoblast | 3.71e-07 | 3 |
secretory cell | 5.99e-07 | 3 |
stromal cell | 5.99e-07 | 3 |
extracellular matrix secreting cell | 5.99e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 5.16e-10 | 2 |
smooth muscle tissue | 3.71e-07 | 3 |
blood vessel smooth muscle | 3.71e-07 | 3 |
arterial system smooth muscle | 3.71e-07 | 3 |
artery smooth muscle tissue | 3.71e-07 | 3 |
aorta smooth muscle tissue | 3.71e-07 | 3 |