FFCP PHASE1:Mm9::chr4:43397112..43397121,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=100213|HGNC=|UniProt=|association_with_transcript=-29bp_to_ENSMUST00000150066_5end|description=CAGE_peak_20_at_Rusc2_5end|id=chr4:43397112..43397121,+|ontology_enrichment_celltype=CL:0000055!2.46e-08!50;CL:0002321!1.78e-07!70;CL:0000220!1.78e-07!70;CL:0000680!6.86e-07!6;CL:0000183!6.86e-07!6;CL:0000187!6.86e-07!6;CL:0000056!6.86e-07!6|ontology_enrichment_celltype_v019_2=CL:0002494,2.25e-19,3;CL:0000737,2.25e-19,3;CL:0000746,2.25e-19,3;CL:0000513,2.25e-19,3;CL:0000217,1.10e-12,2;CL:0000328,1.10e-12,2;CL:0002573,1.10e-12,2;CL:0002376,1.10e-12,2;CL:0000218,1.10e-12,2;CL:0000692,1.10e-12,2;CL:0002377,1.10e-12,2;CL:0002375,1.10e-12,2;CL:0000680,5.72e-10,6;CL:0000187,5.72e-10,6;CL:0000056,5.72e-10,6;CL:0000215,9.29e-09,3;CL:0000222,1.29e-08,7;CL:0000355,8.42e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!4.41e-09!11;UBERON:0005178!3.96e-07!17;UBERON:0005181!3.96e-07!17;UBERON:0002224!3.96e-07!17;UBERON:0000915!3.96e-07!17;UBERON:0008947!3.96e-07!17;UBERON:0003258!3.96e-07!17;UBERON:0005157!5.52e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.21e-08,3;UBERON:0000478,1.21e-08,3;UBERON:0000158,1.21e-08,3;UBERON:0000305,3.20e-07,1;UBERON:0001134,8.42e-07,9;UBERON:0002036,8.42e-07,9;UBERON:0002385,8.42e-07,9;UBERON:0000486,8.42e-07,9;UBERON:0007503,8.42e-07,9;UBERON:0001015,8.42e-07,9;UBERON:0002329,8.42e-07,9;UBERON:0003082,8.42e-07,9;UBERON:0003059,8.42e-07,9;UBERON:0007282,8.42e-07,9;UBERON:0004290,8.42e-07,9;UBERON:0009618,8.42e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,2.57259436035947,2.86533439938757,3.09403255366465,0,0,0,0.677689064138264,0,0.449949858640699,0,2.1314403448383,0.599200221036809,0,0,0,0,0,0,0,0,0,1.10115880999389,0.638436690425939,0.153606533256243,0,0,0,0.837548997004143,0,0.15279824777681,0,0,0,1.28734528666413,1.88928900266964,0,0,2.719885334831,0,0,0,0.140444420131752,0,0,0,0,1.28326477414318,0,0,0.649473123033642,1.52015919285059,0,0,0,0.148442139064825,0,0,0.230615497256059,0.301445281105245,0.352766121407114,0,1.73036477414062,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,2.40179147216586,0,0,0,0,0,0.714130922658041,0.585400943573396,0.157635144106191,0.44292937929755,0.318909537314974,0.655453258862952,0,1.44649058581512,0,1.08781136763742,0,0,0.321101179975584,0,0,0.252470927204373,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17335854031855,0.42366414172764,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680191150845634,0,0.538283139656854,0.503653849092235,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p20@Rusc2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:100213 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-29bp_to_ENSMUST00000150066_5end | |||
|cluster_id=chr4:43397112..43397121,+ | |||
|description=CAGE_peak_20_at_Rusc2_5end | |||
|id=chr4:43397112..43397121,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.46e-08!50;CL:0002321!1.78e-07!70;CL:0000220!1.78e-07!70;CL:0000680!6.86e-07!6;CL:0000183!6.86e-07!6;CL:0000187!6.86e-07!6;CL:0000056!6.86e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,2.25e-19,3;CL:0000737,2.25e-19,3;CL:0000746,2.25e-19,3;CL:0000513,2.25e-19,3;CL:0000217,1.10e-12,2;CL:0000328,1.10e-12,2;CL:0002573,1.10e-12,2;CL:0002376,1.10e-12,2;CL:0000218,1.10e-12,2;CL:0000692,1.10e-12,2;CL:0002377,1.10e-12,2;CL:0002375,1.10e-12,2;CL:0000680,5.72e-10,6;CL:0000187,5.72e-10,6;CL:0000056,5.72e-10,6;CL:0000215,9.29e-09,3;CL:0000222,1.29e-08,7;CL:0000355,8.42e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!4.41e-09!11;UBERON:0005178!3.96e-07!17;UBERON:0005181!3.96e-07!17;UBERON:0002224!3.96e-07!17;UBERON:0000915!3.96e-07!17;UBERON:0008947!3.96e-07!17;UBERON:0003258!3.96e-07!17;UBERON:0005157!5.52e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.21e-08,3;UBERON:0000478,1.21e-08,3;UBERON:0000158,1.21e-08,3;UBERON:0000305,3.20e-07,1;UBERON:0001134,8.42e-07,9;UBERON:0002036,8.42e-07,9;UBERON:0002385,8.42e-07,9;UBERON:0000486,8.42e-07,9;UBERON:0007503,8.42e-07,9;UBERON:0001015,8.42e-07,9;UBERON:0002329,8.42e-07,9;UBERON:0003082,8.42e-07,9;UBERON:0003059,8.42e-07,9;UBERON:0007282,8.42e-07,9;UBERON:0004290,8.42e-07,9;UBERON:0009618,8.42e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,2.57259436035947,2.86533439938757,3.09403255366465,0,0,0,0.677689064138264,0,0.449949858640699,0,2.1314403448383,0.599200221036809,0,0,0,0,0,0,0,0,0,1.10115880999389,0.638436690425939,0.153606533256243,0,0,0,0.837548997004143,0,0.15279824777681,0,0,0,1.28734528666413,1.88928900266964,0,0,2.719885334831,0,0,0,0.140444420131752,0,0,0,0,1.28326477414318,0,0,0.649473123033642,1.52015919285059,0,0,0,0.148442139064825,0,0,0.230615497256059,0.301445281105245,0.352766121407114,0,1.73036477414062,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,2.40179147216586,0,0,0,0,0,0.714130922658041,0.585400943573396,0.157635144106191,0.44292937929755,0.318909537314974,0.655453258862952,0,1.44649058581512,0,1.08781136763742,0,0,0.321101179975584,0,0,0.252470927204373,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17335854031855,0.42366414172764,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680191150845634,0,0.538283139656854,0.503653849092235,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p20@Rusc2 | |||
}} |
Revision as of 11:36, 5 August 2015
Short description: | p20@Rusc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_Rusc2_5end |
Coexpression cluster: | NA |
Association with transcript: | -29bp_to_ENSMUST00000150066_5end |
EntrezGene: | 100213 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 2.25e-19 | 3 |
striated muscle cell | 2.25e-19 | 3 |
cardiac muscle cell | 2.25e-19 | 3 |
cardiac muscle myoblast | 2.25e-19 | 3 |
insulating cell | 1.10e-12 | 2 |
myelin accumulating cell | 1.10e-12 | 2 |
Schwann cell | 1.10e-12 | 2 |
non-myelinating Schwann cell | 1.10e-12 | 2 |
myelinating Schwann cell;;Schwann cell | 1.10e-12 | 2 |
terminal Schwann cell | 1.10e-12 | 2 |
immature Schwann cell | 1.10e-12 | 2 |
Schwann cell precursor | 1.10e-12 | 2 |
muscle precursor cell | 5.72e-10 | 6 |
muscle cell | 5.72e-10 | 6 |
myoblast | 5.72e-10 | 6 |
barrier cell | 9.29e-09 | 3 |
mesodermal cell | 1.29e-08 | 7 |
multi-potent skeletal muscle stem cell | 8.42e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.21e-08 | 3 |
extraembryonic structure | 1.21e-08 | 3 |
membranous layer | 1.21e-08 | 3 |
amnion | 3.20e-07 | 1 |
skeletal muscle tissue | 8.42e-07 | 9 |
striated muscle tissue | 8.42e-07 | 9 |
muscle tissue | 8.42e-07 | 9 |
multilaminar epithelium | 8.42e-07 | 9 |
epithelial vesicle | 8.42e-07 | 9 |
musculature | 8.42e-07 | 9 |
somite | 8.42e-07 | 9 |
myotome | 8.42e-07 | 9 |
presomitic mesoderm | 8.42e-07 | 9 |
presumptive segmental plate | 8.42e-07 | 9 |
dermomyotome | 8.42e-07 | 9 |
trunk paraxial mesoderm | 8.42e-07 | 9 |