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FFCP PHASE1:Mm9::chr9:66767453..66767517,-: Difference between revisions

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{{FFCP|EntrezGene=235442|HGNC=|MCL_coexpression_id=260|UniProt=P61028,E9Q445,Q0PD49,Q0PD50|association_with_transcript=0bp_to_ENSMUST00000041139,ENSMUST00000113722,NM_173413,uc009qfk.2_5end|description=CAGE_peak_1_at_Rab8b_5end|id=chr9:66767453..66767517,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.32e-13!45;UBERON:0003061!3.32e-13!45;UBERON:0002193!1.40e-12!48;UBERON:0004177!1.19e-11!29;UBERON:0002405!7.87e-09!70;UBERON:0000065!1.04e-08!41;UBERON:0002370!1.29e-08!23;UBERON:0000974!1.29e-08!23;UBERON:0004807!1.29e-08!23;UBERON:0005058!1.29e-08!23;UBERON:0003351!1.29e-08!23;UBERON:0009113!1.29e-08!23;UBERON:0003295!1.29e-08!23;UBERON:0009722!1.29e-08!23;UBERON:0005562!1.29e-08!23;UBERON:0007690!1.29e-08!23;UBERON:0001004!4.75e-08!42;UBERON:0006562!6.00e-08!24;UBERON:0001557!6.00e-08!24;UBERON:0001042!6.00e-08!24;UBERON:0008814!6.00e-08!24;UBERON:0009145!6.00e-08!24;UBERON:0003081!8.09e-08!88;UBERON:0003408!1.07e-07!24;UBERON:0005057!7.02e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.32e-13,45;UBERON:0003061,3.32e-13,45;UBERON:0002193,1.40e-12,48;UBERON:0002405,1.40e-12,48;UBERON:0004177,1.19e-11,29;UBERON:0005057,1.19e-11,29;UBERON:0000077,4.91e-11,35;UBERON:0000065,1.04e-08,41;UBERON:0002370,1.29e-08,23;UBERON:0000974,1.29e-08,23;UBERON:0004807,1.29e-08,23;UBERON:0005058,1.29e-08,23;UBERON:0003351,1.29e-08,23;UBERON:0009113,1.29e-08,23;UBERON:0003295,1.29e-08,23;UBERON:0009722,1.29e-08,23;UBERON:0005562,1.29e-08,23;UBERON:0007690,1.29e-08,23;UBERON:0001004,4.75e-08,42;UBERON:0006562,6.00e-08,24;UBERON:0001557,6.00e-08,24;UBERON:0001042,6.00e-08,24;UBERON:0008814,6.00e-08,24;UBERON:0009145,6.00e-08,24;UBERON:0003408,1.07e-07,24;UBERON:0003081,2.03e-07,87;UBERON:0000926,8.91e-07,120;UBERON:0004120,8.91e-07,120;UBERON:0006603,8.91e-07,120|phase1_expression=27.225304007815,53.3932373688222,39.1299345875001,8.16653370528441,8.5152274090879,15.277013743982,15.1848216387092,64.8199083676713,401.529435576554,389.483371799797,142.282131595395,173.10558501988,42.1153795630766,36.8914098208169,62.6246352213446,66.4118877038629,81.149177862865,35.3317625201226,36.6095537727323,25.0389894560838,27.4689827187955,25.8156473122302,25.3363795464767,24.6388331101846,18.1233332043064,28.711598205751,20.6765758156356,32.967098600941,9.5011709728187,11.089325709437,19.5122849376668,12.065582795733,7.99584223859941,0,2.02196133825892,4.65457007003779,4.08338712524738,230.610928536036,146.891044770474,224.591686164759,255.29246580546,230.186328430996,228.675376277673,24.8016731411887,23.1139403180493,30.4687608588391,2.34717403304412,7.84890562969608,4.83309602015838,10.1103547518627,5.17949760013841,5.75010257459886,40.9389558780877,68.9094034910777,74.9489172087695,36.5308399171045,37.2493471920384,27.8462929829819,18.0061650165042,15.869729378161,16.4796164911607,6.43804610931351,6.22506357277798,29.6966906702862,32.6325899647102,26.2877642530057,12.583204641773,12.6792040756113,32.7659174894789,21.7359560714022,24.1873705554089,12.5686433137674,15.9025349485162,22.1708346579067,26.357504530015,22.9804696652505,11.0115880999389,30.0065244500191,31.1821262510174,16.353899678544,21.6825715337711,20.3156214517136,18.7052609330925,23.6360296213306,24.90611438762,29.4628585473668,48.1216281100968,26.0959224155421,56.0373830665562,67.1075453748255,34.7837386442013,16.3480536626463,0,2.69851595818909,1.94932925234301,1.79210754838934,21.487996280158,27.0984212899112,23.9003124234639,17.3136391510067,31.8306128695298,28.2318250311499,58.6052051325285,28.4426681261332,9.95858788651585,9.88103475352884,15.6712577954583,17.8126852361734,130.763631241822,30.1337542301594,20.6447538851702,20.3991870469135,23.2921652228619,22.9098413639986,32.2193057551831,14.2003248202533,20.0227923864843,32.1010572362204,58.3842964286917,32.3533699894818,41.518205470554,52.366527338604,1.86391761218122,25.4719293400046,20.5257772677186,21.4583926375217,82.7922510335909,43.7928993625188,71.9217485233546,30.407499799179,27.4500361691176,28.9005009859588,34.7648640384553,26.5944075623544,28.2591740601002,29.0411860891286,40.0228699931743,46.777020949395,5.81262344397452,19.7815344533286,28.4963770088321,18.1622662502444,28.4498165092452,29.9902587493073,26.4661981698665,33.8220221552003,23.6128345890517,20.1788629176432,14.6586235194333,22.1254113796349,23.2255483896412,18.8508329887714,30.5851974148158,43.5315208152708,38.2754773718775,25.4763861527671,43.5372176134206,47.3520149091076,60.8109888706568,27.5477277472218,24.6252362980151,24.308378297237,28.8828577413957,21.0537727969722,22.5229984815572,24.6485981435432,17.4377710909752,28.8410395646909,22.5446994381468,24.4609521477852,22.5371290537479,21.0527981892479,25.0287131431798,20.936201326618,47.1049484783645,35.1933774337153,21.8076396769307,29.618463466317,26.8743195674395,35.2999741227867,28.2219740295384,26.4205417256579,30.6881700505921,34.430838326373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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:235442
|HGNC=
|MCL_coexpression_id=260
|TSSclassifier=NA
|UniProt=uniprot:P61028,uniprot:E9Q445,uniprot:Q0PD49,uniprot:Q0PD50
|association_with_transcript=0bp_to_ENSMUST00000041139,ENSMUST00000113722,NM_173413,uc009qfk.2_5end
|cluster_id=chr9:66767453..66767517,-
|description=CAGE_peak_1_at_Rab8b_5end
|id=chr9:66767453..66767517,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002390!3.32e-13!45;UBERON:0003061!3.32e-13!45;UBERON:0002193!1.40e-12!48;UBERON:0004177!1.19e-11!29;UBERON:0002405!7.87e-09!70;UBERON:0000065!1.04e-08!41;UBERON:0002370!1.29e-08!23;UBERON:0000974!1.29e-08!23;UBERON:0004807!1.29e-08!23;UBERON:0005058!1.29e-08!23;UBERON:0003351!1.29e-08!23;UBERON:0009113!1.29e-08!23;UBERON:0003295!1.29e-08!23;UBERON:0009722!1.29e-08!23;UBERON:0005562!1.29e-08!23;UBERON:0007690!1.29e-08!23;UBERON:0001004!4.75e-08!42;UBERON:0006562!6.00e-08!24;UBERON:0001557!6.00e-08!24;UBERON:0001042!6.00e-08!24;UBERON:0008814!6.00e-08!24;UBERON:0009145!6.00e-08!24;UBERON:0003081!8.09e-08!88;UBERON:0003408!1.07e-07!24;UBERON:0005057!7.02e-07!51
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.32e-13,45;UBERON:0003061,3.32e-13,45;UBERON:0002193,1.40e-12,48;UBERON:0002405,1.40e-12,48;UBERON:0004177,1.19e-11,29;UBERON:0005057,1.19e-11,29;UBERON:0000077,4.91e-11,35;UBERON:0000065,1.04e-08,41;UBERON:0002370,1.29e-08,23;UBERON:0000974,1.29e-08,23;UBERON:0004807,1.29e-08,23;UBERON:0005058,1.29e-08,23;UBERON:0003351,1.29e-08,23;UBERON:0009113,1.29e-08,23;UBERON:0003295,1.29e-08,23;UBERON:0009722,1.29e-08,23;UBERON:0005562,1.29e-08,23;UBERON:0007690,1.29e-08,23;UBERON:0001004,4.75e-08,42;UBERON:0006562,6.00e-08,24;UBERON:0001557,6.00e-08,24;UBERON:0001042,6.00e-08,24;UBERON:0008814,6.00e-08,24;UBERON:0009145,6.00e-08,24;UBERON:0003408,1.07e-07,24;UBERON:0003081,2.03e-07,87;UBERON:0000926,8.91e-07,120;UBERON:0004120,8.91e-07,120;UBERON:0006603,8.91e-07,120
|phase1_expression=27.225304007815,53.3932373688222,39.1299345875001,8.16653370528441,8.5152274090879,15.277013743982,15.1848216387092,64.8199083676713,401.529435576554,389.483371799797,142.282131595395,173.10558501988,42.1153795630766,36.8914098208169,62.6246352213446,66.4118877038629,81.149177862865,35.3317625201226,36.6095537727323,25.0389894560838,27.4689827187955,25.8156473122302,25.3363795464767,24.6388331101846,18.1233332043064,28.711598205751,20.6765758156356,32.967098600941,9.5011709728187,11.089325709437,19.5122849376668,12.065582795733,7.99584223859941,0,2.02196133825892,4.65457007003779,4.08338712524738,230.610928536036,146.891044770474,224.591686164759,255.29246580546,230.186328430996,228.675376277673,24.8016731411887,23.1139403180493,30.4687608588391,2.34717403304412,7.84890562969608,4.83309602015838,10.1103547518627,5.17949760013841,5.75010257459886,40.9389558780877,68.9094034910777,74.9489172087695,36.5308399171045,37.2493471920384,27.8462929829819,18.0061650165042,15.869729378161,16.4796164911607,6.43804610931351,6.22506357277798,29.6966906702862,32.6325899647102,26.2877642530057,12.583204641773,12.6792040756113,32.7659174894789,21.7359560714022,24.1873705554089,12.5686433137674,15.9025349485162,22.1708346579067,26.357504530015,22.9804696652505,11.0115880999389,30.0065244500191,31.1821262510174,16.353899678544,21.6825715337711,20.3156214517136,18.7052609330925,23.6360296213306,24.90611438762,29.4628585473668,48.1216281100968,26.0959224155421,56.0373830665562,67.1075453748255,34.7837386442013,16.3480536626463,0,2.69851595818909,1.94932925234301,1.79210754838934,21.487996280158,27.0984212899112,23.9003124234639,17.3136391510067,31.8306128695298,28.2318250311499,58.6052051325285,28.4426681261332,9.95858788651585,9.88103475352884,15.6712577954583,17.8126852361734,130.763631241822,30.1337542301594,20.6447538851702,20.3991870469135,23.2921652228619,22.9098413639986,32.2193057551831,14.2003248202533,20.0227923864843,32.1010572362204,58.3842964286917,32.3533699894818,41.518205470554,52.366527338604,1.86391761218122,25.4719293400046,20.5257772677186,21.4583926375217,82.7922510335909,43.7928993625188,71.9217485233546,30.407499799179,27.4500361691176,28.9005009859588,34.7648640384553,26.5944075623544,28.2591740601002,29.0411860891286,40.0228699931743,46.777020949395,5.81262344397452,19.7815344533286,28.4963770088321,18.1622662502444,28.4498165092452,29.9902587493073,26.4661981698665,33.8220221552003,23.6128345890517,20.1788629176432,14.6586235194333,22.1254113796349,23.2255483896412,18.8508329887714,30.5851974148158,43.5315208152708,38.2754773718775,25.4763861527671,43.5372176134206,47.3520149091076,60.8109888706568,27.5477277472218,24.6252362980151,24.308378297237,28.8828577413957,21.0537727969722,22.5229984815572,24.6485981435432,17.4377710909752,28.8410395646909,22.5446994381468,24.4609521477852,22.5371290537479,21.0527981892479,25.0287131431798,20.936201326618,47.1049484783645,35.1933774337153,21.8076396769307,29.618463466317,26.8743195674395,35.2999741227867,28.2219740295384,26.4205417256579,30.6881700505921,34.4308383263732,30.8443890003933,41.1747386810027,45.2403375840485,33.8226002469956,44.8417400373976,27.8634016682809,25.7204279350886,18.7192796859105,13.4664209676688,26.8484004632863,25.9227792048085,28.9184885540346,23.856155921618,28.3348712356887,26.306399443691,23.6176236767363,18.9968460688064,14.6842625066943,7.41131567717872,60.397928269226,59.1642575290741,69.0326685021501,71.001042485976,64.1531244941429,46.8511567277812,53.7991777033016,40.3716714669838,31.0254396902532,53.1942364151212,23.4448797031157,19.0342980599882,12.3763650194085,7.71408878144222,6.27176577772377,54.3174379089818,18.380666941737,33.2448551941733,31.4028408684098,32.8566347603903,41.7090581030121,41.4195935141664,42.9294025287157,54.5417598607421,65.3320834463886,55.649714261463,44.8985482321122,59.2309487800022,45.4198043945946,220.155274551337,213.211028056934,14.2611639175521,22.0749397043786,27.1330497079368,31.5299436933027,15.2459499200308,23.2273253028023,29.0267561862956,33.5777320095109,31.4518160689886,25.3306925829705,28.5182302825464,32.2707245099269,29.5511812222673,39.1622849601158,37.1570511269732,29.5615611108062,28.3880170416537,21.1898068364034,30.7856353178259,34.808695947205,11.9470624505967,20.3935734370184,12.3952658355548,16.9744571780308,10.6308681437078,19.0609791725235,32.5619649391959,22.9026249570828,18.8943610543902,13.2735438333043,9.48767477174989,8.25084345985495,19.0646179222121,26.10885863454,11.3835641728824,31.9362182197073,30.6798604201133,24.6148968290857,26.8214903581457,13.700922710157,54.6785079788445,29.0209937083434,11.467476698858,56.8857572648106,56.0281560634792,40.2890338520081,38.9153841450225,50.0629744222437,25.6503136234269,27.4429446975554,75.0123166702573,39.4198917809755,76.6705343310606,105.486335922627,88.9879422463874,76.4119098509786,160.969573204181,139.391646514363,148.979571761169,14.3200592702267,24.9905434929097,27.4481280621246,33.3736503139366,27.5996550739099,30.5707589244649,26.4334118914249,28.7634025924169,16.7523802869779,19.1830160471853,14.2908042009993,30.4394186889463,28.7071768404439,20.8477697975943,27.2231663681667,25.8319646955462,31.9327077177571,31.0996682411248,21.8743366537836,17.3017918302423,33.5801927948148,33.1234507196545,46.4536347323422,32.2333092311361,39.4410075512937,41.7045841758722,44.5776472212029,48.8756132761912,40.3856710387095,50.9528868752291,50.584191424022,49.9916651656799,49.7073092724624,55.5509920216589,52.0506063274182,54.5815133187927,21.9928472106755,6.65957860122194,6.72853924571068,6.04384618910682,31.1035246391827,42.9792868783207,26.1906822702189,31.2977833455436,19.0597399533438,23.7195773899168,27.6195141904306,26.3531936182122,26.1216837162405,25.3480532315138,26.4387864086395,20.2506750069542,31.0721630224712,28.5479717660049,24.8524949640874,23.0407911636872,27.5327162646711,24.9271064401036,41.8143553357466,28.0881637921496,22.7965950478018,27.5585942474003,23.281961467995,24.0689407193861,23.2481434822694,29.4035987872678,29.0484565734557,34.6473577638565,32.5888025740785,32.6233463667883,27.6250340944183,30.7093463753867,28.1647461877009,26.3734976514116,31.3533699886266,27.7724094432186,34.6077822010708,32.9041942127303,30.958786742686,29.1739079287525,32.0689363909454,26.1587001208065,30.7791562382276,28.6546680214768,20.2011217796786,24.4388137335799,29.6498491950446,27.8277109355389,33.9311682197266,31.0579643679638,21.4837097026634,30.6450407063485,31.1563028370033,23.7197531765366,28.676884485537,30.6065543018956
|short_description=p1@Rab8b
}}

Revision as of 12:48, 5 August 2015

Short description:p1@Rab8b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rab8b_5end
Coexpression cluster:MCL_coexpression_mm9:260
Association with transcript: 0bp_to_ENSMUST00000041139, ENSMUST00000113722, NM_173413, uc009qfk.2_5end
EntrezGene:235442
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Rab8b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G727.23
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I553.39
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I639.13
CD326+ enterocyte, pool1.CNhs13542.11848-124I38.17
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I715.28
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I815.18
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E964.82
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7401.53
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2389.48
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6142.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1173.11
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E442.12
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E836.89
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A162.62
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A366.41
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A581.15
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A235.33
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A436.61
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A625.04
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A327.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H225.82
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I925.34
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D124.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D218.12
GP2+ M cell, pool1.CNhs13228.11845-124H928.71
GP2+ M cell, pool2.CNhs13231.11846-124I120.68
GP2+ M cell, pool3.CNhs13240.11847-124I232.97
Ileum epithelium, pool1.CNhs13199.10252-104B99.50
Ileum epithelium, pool2.CNhs13232.10253-104C111.09
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C819.51
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I312.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.08
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8230.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1146.89
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3224.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9255.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2230.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4228.68
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D824.80
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D923.11
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B330.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.85
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.83
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.18
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A240.94
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I968.91
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A174.95
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C136.53
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E137.25
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C527.85
Mouse Granule cells, donor1.CNhs12131.11713-123C318.01
Mouse Granule cells, donor2.CNhs12357.11731-123E315.87
Mouse Granule cells, donor3.CNhs12108.11636-122C716.48
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C729.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E732.63
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D226.29
Mouse Microglia, donor1.CNhs12629.11718-123C812.58
Mouse Microglia, donor2.CNhs12634.11736-123E812.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D532.77
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F521.74
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D924.19
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.90
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D222.17
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F226.36
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.98
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F330.01
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D731.18
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D416.35
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F421.68
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D820.32
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.71
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E523.64
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I624.91
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D629.46
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F648.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E126.10
Mouse Schwann, donor1.CNhs12507.11728-123D956.04
Mouse Schwann, donor2.CNhs12573.11746-123F967.11
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G334.78
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F716.35
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A721.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I727.10
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E323.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I817.31
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G631.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H128.23
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I858.61
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.96
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G29.88
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G315.67
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B617.81
accessory axillary lymph node, adult.CNhs10475.1063-29H9130.76
adrenal gland, adult.CNhs10508.49-24D730.13
adrenal gland, embryo E14.CNhs11038.406-44C520.64
adrenal gland, embryo E16.CNhs11004.1254-43D620.40
adrenal gland, embryo E17.CNhs11043.1263-45I123.29
adrenal gland, embryo E18.CNhs11026.1262-18F522.91
adrenal gland, neonate N00.CNhs11191.1311-23C132.22
adrenal gland, neonate N25.CNhs11223.1377-27I314.20
amnion, adult pregnant day17.5.CNhs10488.583-22A820.02
aorta, adult.CNhs10498.46-23H132.10
bone (os femoris), adult.CNhs10483.56-12G258.38
bone (os femoris), neonate N02.CNhs11227.1985-43F532.35
bone (os femoris), neonate N16.CNhs11225.1525-43A641.52
bone (os femoris), neonate N20.CNhs11195.1350-25C352.37
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B225.47
cerebellum, neonate N30.CNhs11135.1395-42I220.53
colon, adult.CNhs10468.36-18H721.46
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C782.79
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D143.79
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D471.92
corpora quadrigemina, adult.CNhs10501.16-22A430.41
corpus striatum, adult.CNhs10487.19-21D827.45
corpus striatum, neonate N00.CNhs11226.630-43F128.90
cortex, adult.CNhs10473.12-14D534.76
cortex, neonate N30.CNhs11107.1392-42F226.59
diencephalon, adult.CNhs10482.20-12F228.26
diencephalon, neonate N30.CNhs11201.1388-42B229.04
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B140.02
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A246.78
epididymis, adult.CNhs10490.58-23B25.81
eyeball, adult.CNhs10484.31-12G419.78
eyeball, embryo E12.CNhs11016.345-16C628.50
eyeball, embryo E14.CNhs10521.399-16E218.16
eyeball, embryo E15.CNhs10593.426-16C928.45
eyeball, embryo E17.CNhs11023.1261-18D429.99
eyeball, neonate N00.CNhs11207.633-15C626.47
eyeball, neonate N01.CNhs11140.1532-43E733.82
eyeball, neonate N02.CNhs11205.1551-44G823.61
eyeball, neonate N16.CNhs11188.777-19A220.18
forelimb, embryo E11.CNhs10596.335-25E214.66
forelimb, embryo E12.CNhs10600.359-14H222.13
forelimb, embryo E13.CNhs10589.384-1E223.23
forelimb, embryo E14.CNhs10577.413-26A818.85
forelimb, embryo E15.CNhs11007.437-20E730.59
forelimb, embryo E17.CNhs10598.1517-43C443.53
forelimb, embryo E18.CNhs11008.1520-43B538.28
gonad, embryo E13.CNhs11044.1564-45I625.48
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C843.54
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D247.35
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D560.81
heart, embryo E11.CNhs10586.331-24E927.55
heart, embryo E12.CNhs11015.353-12F524.63
heart, embryo E13.CNhs11013.376-3I924.31
heart, embryo E14.CNhs10597.403-26D428.88
heart, embryo E15.CNhs11017.431-16C821.05
heart, embryo E16.CNhs11021.457-17C622.52
heart, embryo E17.CNhs11025.479-18E524.65
heart, embryo E18.CNhs11030.1283-20G317.44
heart, neonate N00.CNhs11213.639-21E328.84
heart, neonate N03.CNhs11221.1349-25I222.54
heart, neonate N10.CNhs11118.749-24G124.46
heart, neonate N16.CNhs11209.782-15G122.54
heart, neonate N20.CNhs11127.821-26I621.05
heart, neonate N25.CNhs11196.1351-25D325.03
heart, neonate N30.CNhs11202.1390-42D220.94
hippocampus, adult.CNhs10478.13-16E847.10
hippocampus, neonate N00.CNhs11228.627-43G135.19
intestinal mucosa, adult.CNhs10506.860-29I321.81
intestine, adult.CNhs10496.178-9A329.62
intestine, embryo E12.CNhs11019.1251-16I526.87
intestine, embryo E13.CNhs11010.381-16D535.30
intestine, embryo E15.CNhs10602.976-16D828.22
intestine, embryo E16.CNhs10585.463-22H426.42
intestine, embryo E17.CNhs10582.482-18D330.69
intestine, embryo E18.CNhs10526.1289-20F734.43
intestine, neonate N00.CNhs11126.644-26D130.84
intestine, neonate N01.CNhs11192.1322-23E941.17
intestine, neonate N06.CNhs11102.688-20B845.24
intestine, neonate N07.CNhs11095.720-20F233.82
intestine, neonate N10.CNhs11098.755-23A544.84
intestine, neonate N20.CNhs11187.827-18D127.86
intestine, neonate N25.CNhs11121.1352-25E325.72
intestine, neonate N30.CNhs11131.1384-42G118.72
kidney, embryo E14.CNhs10606.411-4I913.47
kidney, embryo E15.CNhs10997.434-16F826.85
kidney, embryo E16.CNhs10584.464-22A525.92
kidney, embryo E17.CNhs11028.483-18I228.92
kidney, embryo E18.CNhs11001.1288-20C723.86
kidney, neonate N00.CNhs11214.646-21G728.33
kidney, neonate N10.CNhs11206.758-6D526.31
kidney, neonate N20.CNhs11113.832-19I123.62
kidney, neonate N25.CNhs11122.1353-25F319.00
kidney, neonate N30.CNhs11203.1385-42H114.68
liver, adult pregnant day01.CNhs10466.508-5B27.41
liver, embryo E12.CNhs10601.355-15F860.40
liver, embryo E13.CNhs10524.378-3H659.16
liver, embryo E14.CNhs10594.409-16E169.03
liver, embryo E15.CNhs10520.433-16D771.00
liver, embryo E16.CNhs10523.462-17F564.15
liver, embryo E17.CNhs10510.481-18A346.85
liver, embryo E18.CNhs10579.499-43G453.80
liver, neonate N00.CNhs11117.641-24F440.37
liver, neonate N03.CNhs11123.1345-25G231.03
liver, neonate N06.CNhs11101.684-20A853.19
liver, neonate N07.CNhs11103.716-20H223.44
liver, neonate N10.CNhs11115.751-24B919.03
liver, neonate N20.CNhs11220.823-25A312.38
liver, neonate N25.CNhs11198.1368-26H17.71
liver, neonate N30.CNhs11106.1382-42D16.27
lung, adult.CNhs10474.28-22B154.32
lung, embryo E12.CNhs10522.354-16G218.38
lung, embryo E14.CNhs10604.404-26F833.24
lung, embryo E15.CNhs11020.432-17C531.40
lung, embryo E16.CNhs10998.458-17B632.86
lung, embryo E17.CNhs10605.480-44A641.71
lung, embryo E18.CNhs10583.1287-20I641.42
lung, neonate N00.CNhs11224.640-42C642.93
lung, neonate N06.CNhs11212.683-20E554.54
lung, neonate N07.CNhs11111.715-19A365.33
lung, neonate N10.CNhs11219.750-23E655.65
lung, neonate N20.CNhs11109.822-18A444.90
lung, neonate N25.CNhs11119.1359-25C759.23
lung, neonate N30.CNhs11133.1394-42H245.42
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1220.16
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1213.21
mammary gland, adult lactating day02.CNhs10480.595-22B614.26
mammary gland, adult pregnant day19.CNhs10476.588-5H222.07
medulla oblongata, adult.CNhs10477.17-12C227.13
medulla oblongata, neonate N30.CNhs11200.1396-42A331.53
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C715.25
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C223.23
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E129.03
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E233.58
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E331.45
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D725.33
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D828.52
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D932.27
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D429.55
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D539.16
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D637.16
olfactory brain, adult.CNhs10489.18-22I929.56
ovary, adult.CNhs10507.91-2I728.39
ovary, embryo E18.CNhs11040.505-44H721.19
ovary, neonate N00.CNhs11217.1299-22I430.79
oviduct, adult pregnant day01.CNhs10500.988-6G634.81
pancreas, adult.CNhs10486.34-16E411.95
pancreas, embryo E14.CNhs11012.405-44F420.39
pancreas, embryo E15.CNhs11042.1556-45F212.40
pancreas, embryo E16.CNhs11003.460-26E516.97
pancreas, embryo E17.CNhs10599.1558-45G310.63
pancreas, embryo E18.CNhs10580.1535-43I719.06
pancreas, neonate N00.CNhs11105.645-26G932.56
pancreas, neonate N01.CNhs11138.1531-43D722.90
pancreas, neonate N02.CNhs11139.1539-43D818.89
pancreas, neonate N16.CNhs11136.787-43B613.27
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G819.06
pituitary gland, embryo E12.CNhs11018.346-16E626.11
pituitary gland, embryo E13.CNhs11009.370-44C711.38
pituitary gland, embryo E14.CNhs11037.398-44A531.94
pituitary gland, embryo E15.CNhs10592.427-16B930.68
pituitary gland, embryo E16.CNhs11036.449-43F624.61
pituitary gland, embryo E17.CNhs11039.1265-44F526.82
pituitary gland, neonate N00.CNhs11190.1308-22E913.70
placenta, adult pregnant day10.CNhs10472.539-13I754.68
placenta, adult pregnant day17.CNhs10464.577-18G329.02
prostate, adult.CNhs10470.859-1F811.47
skin, adult.CNhs10492.30-1C356.89
skin, neonate N00.CNhs11124.650-25G456.03
skin, neonate N03.CNhs11215.662-22H340.29
skin, neonate N06.CNhs11097.693-20I538.92
skin, neonate N10.CNhs11108.762-6C450.06
small intestine, neonate N16.CNhs11114.790-21I125.65
spinal cord, adult.CNhs10505.24-13C927.44
spleen, adult.CNhs10465.25-2G275.01
spleen, embryo E16.CNhs11035.461-43C139.42
spleen, embryo E18.CNhs11011.1271-21F276.67
spleen, neonate N10.CNhs11116.752-24D1105.49
spleen, neonate N20.CNhs11112.824-19H188.99
spleen, neonate N25.CNhs11099.1354-25G376.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6160.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9139.39
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3148.98
stomach, adult.CNhs10503.33-1H614.32
stomach, embryo E12.CNhs10588.356-43E324.99
stomach, embryo E15.CNhs10603.1252-16G827.45
stomach, embryo E16.CNhs11022.459-17D433.37
stomach, embryo E17.CNhs11006.1035-18D527.60
stomach, embryo E18.CNhs10999.1286-20C630.57
stomach, neonate N03.CNhs11193.1340-24B826.43
stomach, neonate N07.CNhs11210.718-18A928.76
stomach, neonate N25.CNhs11104.1355-25E416.75
stomach, neonate N30.CNhs11134.1386-42I119.18
submandibular gland, adult.CNhs10469.59-29C114.29
testis, adult.CNhs10504.57-7G530.44
testis, embryo E13.CNhs11031.389-23F528.71
testis, embryo E15.CNhs11034.443-27C520.85
testis, embryo E16.CNhs11033.470-26G527.22
testis, embryo E17.CNhs11029.486-18I525.83
testis, embryo E18.CNhs11027.503-18G531.93
testis, neonate N00.CNhs11189.1300-22B731.10
testis, neonate N07.CNhs11222.726-26I421.87
testis, neonate N10.CNhs11204.763-44D917.30
testis, neonate N20.CNhs11110.839-18H333.58
testis, neonate N30.CNhs11130.1391-42E233.12
thymus, adult.CNhs10471.38-12B546.45
thymus, embryo E14.CNhs11041.402-44I432.23
thymus, embryo E15.CNhs11005.430-45I239.44
thymus, embryo E16.CNhs11002.456-26C541.70
thymus, embryo E17.CNhs10581.478-18C144.58
thymus, embryo E18.CNhs10595.1273-19G448.88
thymus, neonate N02.CNhs11181.1541-43F840.39
thymus, neonate N03.CNhs11137.2104-43C750.95
thymus, neonate N06.CNhs11197.681-26C450.58
thymus, neonate N07.CNhs11211.713-19D349.99
thymus, neonate N10.CNhs11194.748-24E449.71
thymus, neonate N20.CNhs11186.820-7A255.55
thymus, neonate N25.CNhs11125.1362-25G752.05
thymus, neonate N30.CNhs11132.1393-42G254.58
tongue, adult.CNhs10499.32-1B421.99
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.73
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.04
urinary bladder, adult.CNhs10481.879-12E431.10
uterus, adult pregnant day19.CNhs10497.590-15F542.98
uterus, adult.CNhs10509.92-27E526.19
vagina, adult.CNhs10502.89-27D531.30
vesicular gland, adult.CNhs10491.51-27F819.06
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A123.72
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A227.62
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A326.35
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D726.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A425.35
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A526.44
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.25
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A731.07
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A828.55
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A924.85
whole body, embryo E11.CNhs11014.324-5I823.04
whole body, embryo E12.CNhs10587.857-27C927.53
whole body, embryo E13.CNhs10512.372-23H224.93
whole body, embryo E14.5.CNhs10578.420-27D241.81
whole body, embryo E14.CNhs10519.395-14B128.09
whole body, embryo E16.CNhs10514.453-14F222.80
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G527.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G523.28
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G524.07
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G523.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G529.40
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G529.05
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G534.65
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G532.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G532.62
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G527.63
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G530.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G528.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G526.37
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G531.35
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G527.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G534.61
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G532.90
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G530.96
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G529.17
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G532.07
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G526.16
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G530.78
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G528.65
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G520.20
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G524.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G529.65
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G527.83
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G533.93
whole body, embryo E17.5.CNhs10513.490-9F931.06
whole body, embryo E17.CNhs10517.475-3I521.48
whole body, embryo E18.CNhs10516.493-3B330.65
whole body, neonate N00.CNhs10525.657-19C231.16
whole body, neonate N01.CNhs10576.659-23C623.72
whole body, neonate N06.CNhs10515.692-21D128.68
whole body, neonate N10.CNhs10518.761-6B430.61





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hematopoietic system3.32e-1345
blood island3.32e-1345
hemolymphoid system1.40e-1248
immune system1.40e-1248
hemopoietic organ1.19e-1129
immune organ1.19e-1129
mixed endoderm/mesoderm-derived structure4.91e-1135
respiratory tract1.04e-0841
thymus1.29e-0823
neck1.29e-0823
respiratory system epithelium1.29e-0823
hemolymphoid system gland1.29e-0823
pharyngeal epithelium1.29e-0823
thymic region1.29e-0823
pharyngeal gland1.29e-0823
entire pharyngeal arch endoderm1.29e-0823
thymus primordium1.29e-0823
early pharyngeal endoderm1.29e-0823
respiratory system4.75e-0842
pharynx6.00e-0824
upper respiratory tract6.00e-0824
chordate pharynx6.00e-0824
pharyngeal arch system6.00e-0824
pharyngeal region of foregut6.00e-0824
gland of gut1.07e-0724
lateral plate mesoderm2.03e-0787
mesoderm8.91e-07120
mesoderm-derived structure8.91e-07120
presumptive mesoderm8.91e-07120
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