FFCP PHASE1:Mm9::chr2:79292080..79292119,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=403 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:79292080..79292119,- | |||
|description=CAGE_peak_at_chr2:79292080..79292119,- | |description=CAGE_peak_at_chr2:79292080..79292119,- | ||
|id=chr2:79292080..79292119,- | |id=chr2:79292080..79292119,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.74e-19!63;UBERON:0000970!8.16e-19!9;UBERON:0000019!8.16e-19!9;UBERON:0000047!8.16e-19!9;UBERON:0004088!8.16e-19!9;UBERON:0002104!8.16e-19!9;UBERON:0001456!8.16e-19!9;UBERON:0003072!8.16e-19!9;UBERON:0003071!8.16e-19!9;UBERON:0004128!8.16e-19!9;UBERON:0003056!1.54e-18!49;UBERON:0002346!4.69e-15!71;UBERON:0003075!4.69e-15!71;UBERON:0007284!4.69e-15!71;UBERON:0001444!4.98e-15!11;UBERON:0000020!1.30e-13!12;UBERON:0001032!1.30e-13!12;UBERON:0004456!1.30e-13!12;UBERON:0007811!2.54e-13!86;UBERON:0005085!2.06e-12!13;UBERON:0004121!2.59e-12!102;UBERON:0000924!2.59e-12!102;UBERON:0006601!2.59e-12!102;UBERON:0000153!1.40e-11!94;UBERON:0002616!3.13e-10!49;UBERON:0000955!6.20e-10!50;UBERON:0006238!6.20e-10!50;UBERON:0001017!4.66e-08!73;UBERON:0005743!4.66e-08!73;UBERON:0002780!6.23e-08!39;UBERON:0001890!6.23e-08!39;UBERON:0006240!6.23e-08!39;UBERON:0000073!1.05e-07!75;UBERON:0001016!1.05e-07!75;UBERON:0003080!1.19e-07!40;UBERON:0001049!3.18e-07!52;UBERON:0005068!3.18e-07!52;UBERON:0006241!3.18e-07!52;UBERON:0007135!3.18e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.05e-30,9;UBERON:0000019,2.05e-30,9;UBERON:0000047,2.05e-30,9;UBERON:0010312,2.05e-30,9;UBERON:0004088,2.05e-30,9;UBERON:0002104,2.05e-30,9;UBERON:0001456,2.05e-30,9;UBERON:0003072,2.05e-30,9;UBERON:0004128,2.05e-30,9;UBERON:0003071,2.05e-30,9;UBERON:0001444,5.79e-25,11;UBERON:0000020,6.45e-23,12;UBERON:0001032,6.45e-23,12;UBERON:0004456,6.45e-23,12;UBERON:0000033,3.49e-21,13;UBERON:0005085,3.49e-21,13;UBERON:0002037,3.35e-12,4;UBERON:0002680,3.35e-12,4;UBERON:0001895,3.35e-12,4;UBERON:0010092,3.35e-12,4;UBERON:0006215,3.35e-12,4;UBERON:0002346,6.42e-11,64;UBERON:0003075,6.42e-11,64;UBERON:0007284,6.42e-11,64;UBERON:0010371,1.46e-09,73;UBERON:0004733,1.90e-08,6;UBERON:0004732,1.90e-08,6;UBERON:0002028,1.90e-08,6;UBERON:0007277,1.90e-08,6;UBERON:0003056,4.72e-08,49;UBERON:0007811,8.41e-08,36;UBERON:0010314,1.48e-07,92;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.255374676170375,0.153606533256243,0.131886287730194,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.49064311333487,3.77004072264219,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0.841767423545896,0.260240885925407,0.229902104433473,0.180062129805349,2.10986744970001,1.56483948048054,6.40568601424249,2.90475346135159,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.720332286654991,0.330418782983798,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0.354680467284547,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0.572895513439397,0.171853182343688,0,0,0,0,0.906284817968409,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0,0,0.476293691283074,0,0,0,0,0,0.532427418478012,0,0,0,0.0846146078916765,0,0,0.271608227691724,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.255374676170375,0.153606533256243,0.131886287730194,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.49064311333487,3.77004072264219,0,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0.841767423545896,0.260240885925407,0.229902104433473,0.180062129805349,2.10986744970001,1.56483948048054,6.40568601424249,2.90475346135159,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.720332286654991,0.330418782983798,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0.354680467284547,0.178368817602071,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0.572895513439397,0.171853182343688,0,0,0,0,0.906284817968409,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0,0,0.476293691283074,0,0,0,0,0,0.532427418478012,0,0,0,0.0846146078916765,0,0,0.271608227691724,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:79292080..79292119,- | |short_description=p@chr2:79292080..79292119,- | ||
}} | }} |
Latest revision as of 13:12, 5 August 2015
Short description: | p@chr2:79292080..79292119, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:79292080..79292119, - |
Coexpression cluster: | MCL_coexpression_mm9:403 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 2.05e-30 | 9 |
camera-type eye | 2.05e-30 | 9 |
simple eye | 2.05e-30 | 9 |
immature eye | 2.05e-30 | 9 |
ocular region | 2.05e-30 | 9 |
visual system | 2.05e-30 | 9 |
face | 2.05e-30 | 9 |
optic cup | 2.05e-30 | 9 |
optic vesicle | 2.05e-30 | 9 |
eye primordium | 2.05e-30 | 9 |
subdivision of head | 5.79e-25 | 11 |
sense organ | 6.45e-23 | 12 |
sensory system | 6.45e-23 | 12 |
entire sense organ system | 6.45e-23 | 12 |
head | 3.49e-21 | 13 |
ectodermal placode | 3.49e-21 | 13 |
cerebellum | 3.35e-12 | 4 |
regional part of metencephalon | 3.35e-12 | 4 |
metencephalon | 3.35e-12 | 4 |
future metencephalon | 3.35e-12 | 4 |
rhombic lip | 3.35e-12 | 4 |
neurectoderm | 6.42e-11 | 64 |
neural plate | 6.42e-11 | 64 |
presumptive neural plate | 6.42e-11 | 64 |
ecto-epithelium | 1.46e-09 | 73 |
segmental subdivision of hindbrain | 1.90e-08 | 6 |
segmental subdivision of nervous system | 1.90e-08 | 6 |
hindbrain | 1.90e-08 | 6 |
presumptive hindbrain | 1.90e-08 | 6 |
pre-chordal neural plate | 4.72e-08 | 49 |
craniocervical region | 8.41e-08 | 36 |
structure with developmental contribution from neural crest | 1.48e-07 | 92 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |