FFCP PHASE1:Mm9::chr11:119774737..119774748,+: Difference between revisions
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{{FFCP|EntrezGene=208092|HGNC=|MCL_coexpression_id=12|UniProt=B1AZ42|association_with_transcript=-6bp_to_ENSMUST00000132197_5end|description=CAGE_peak_4_at_Chmp6_5end|id=chr11:119774737..119774748,+|ontology_enrichment_celltype=CL:0000066!3.85e-11!25;CL:0000223!3.65e-08!20|ontology_enrichment_celltype_v019_2=CL:0000239,2.43e-20,6;CL:0000677,2.43e-20,6;CL:0000584,2.43e-20,6;CL:0000075,2.39e-17,7;CL:0000066,3.09e-17,25;CL:0002076,1.22e-16,15;CL:0002563,2.36e-13,9;CL:0002251,2.36e-13,9;CL:0000223,4.28e-12,20;CL:0000682,3.58e-11,3;CL:0000068,5.59e-10,3;CL:0002202,5.59e-10,3;CL:0000069,5.59e-10,3;CL:0002632,5.59e-10,3;CL:0002368,5.59e-10,3;CL:0000307,5.59e-10,3;CL:0000377,5.59e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!6.07e-11!15;UBERON:0001242!2.09e-09!13;UBERON:0000060!2.09e-09!13;UBERON:0001262!2.09e-09!13;UBERON:0004786!2.09e-09!13;UBERON:0004119!3.75e-09!130;UBERON:0000925!3.75e-09!130;UBERON:0006595!3.75e-09!130;UBERON:0001007!1.74e-08!128;UBERON:0001555!1.74e-08!128;UBERON:0007026!1.74e-08!128;UBERON:0000160!3.63e-08!43;UBERON:0004923!5.51e-08!24;UBERON:0004921!1.33e-07!126;UBERON:0004185!1.33e-07!126;UBERON:0005409!1.66e-07!59;UBERON:0000485!2.48e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.76e-30,15;UBERON:0004923,8.03e-25,24;UBERON:0001242,3.14e-24,13;UBERON:0001262,3.14e-24,13;UBERON:0004786,3.14e-24,13;UBERON:0000160,2.63e-15,31;UBERON:0003350,2.36e-13,9;UBERON:0004808,2.36e-13,9;UBERON:0001277,2.36e-13,9;UBERON:0005409,7.80e-11,47;UBERON:0000485,8.30e-11,11;UBERON:0000331,3.63e-10,3;UBERON:0002116,3.63e-10,3;UBERON:0001204,3.63e-10,3;UBERON:0001168,3.63e-10,3;UBERON:0003126,5.59e-10,3;UBERON:0001005,5.59e-10,3;UBERON:0007196,5.59e-10,3;UBERON:0001558,5.59e-10,3;UBERON:0001962,6.83e-08,2;UBERON:0001961,6.83e-08,2;UBERON:0001744,6.83e-08,2;UBERON:0002108,9.84e-08,4;UBERON:0004119,4.18e-07,118;UBERON:0000925,4.18e-07,118;UBERON:0006595,4.18e-07,118|phase1_expression=0.80074423552397,8.72438519098403,5.0049916332849,4.83942738090928,5.50985302940982,2.51818907867835,2.56973904655078,0.258246646883153,0.422366166455,0.234064526321993,0.171217968225505,0.0797721589953364,0.513602189793617,0,0,0,0,0,0,0.42438965179803,0.0850432901510698,0.0992909512008853,0.261199789138935,3.03985603307473,5.27641346454491,9.76194338995534,4.73838195774982,4.09395342103189,1.71021077510736,1.51218077855958,4.8780712344167,0,0,0,0.288851619751275,0.166234645358492,0.816677425049476,0.418531630736908,0,0,0,0,0,0.629484089877886,0.202753862439029,0.183546752161682,0.782391344348039,0,0,0,0.279972843250725,0,0,0.725362142011344,0.336093799142464,0,0,0,0.202316460859598,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0,0.395658863190582,0.0914876436024097,0.52091337055676,0,0.56276261003168,0,0,0.142371680799103,0,0.151452386666368,0.151143120213571,0.869593466105033,0,0.679971333707751,0.539703191637817,0.649776417447669,0.448026887097336,0.140444420131752,0.340860645156116,0.519572009205738,0,0.281686839553361,0,0,0,1.94841936910093,1.52015919285059,2.52762222507392,0.68510327831436,0,0,0.173485326766136,0.304465478312141,0,0.301445281105245,0.117588707135705,0.251333182659351,2.71914464507811,0.144599356919912,0,0.161766849947409,0.220841518460394,0,1.86391761218122,0,0,0,0,0,0.127070227073065,0.149790639404823,0,0.125654352112864,0,0,0,0,0.203678727700633,0,0,0,0.260240885925407,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.205782136407943,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0.134206418760372,0,0,3.96502539580558,0.264450566663544,0,0.464473343720877,0,0,1.11189021922435,0,0.474529061544512,0.823494773620054,0.754005626400808,0.795825888164603,1.16978452271472,0,0.216138049874694,0.995706366271836,0,0,0,0,0.193952487167626,0.0701358198903186,0.316182685621286,0.147610147979602,0.470996183524124,0.370191491765402,0,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0.744281895337007,0.312037673114561,0.252578877947112,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0.160550589987792,0,0.163934945376675,0,0,0,0,0.238968797952552,0,0,0,0.292255857911312,0,0,0,0,0,0,1.32745138339963,0,0,0,0.295301892880773,0,0.516856586336442,0,0.356497378384721,0,0,1.03135543248187,0,0.36012218806262,0,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0.23467170806371,2.75381692122966,0.220528398054962,0.32977250588296,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0.874442509889552,0,0,0.206386867963223,0,0,0,0,0.169978429993855,0.419854356970974,0.138199973804424,0.954670618015114,0,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0.247960367176008,0.785267825952089,2.46268449254406,0,0,0,0,0,0,0.506868376472335,0,0,0,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0.25984164595559,0.179026695667481,0.198681354781265,0.600977247599844,0.295379054349154,0.100966449948148,0.304827226619999,0.100826185136841,0.194915761479505,0.192423683280659,0.350630706544707,0.226730383615211,0.887943813496259,1.52513556236109,1.34307693091263,0.19318959403219,0.375364950902364,0,0.214368379079066,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0,0,0.187283014939765,0.192075457214608,0.17230640686684,0,0,0,0,0.147198920134397,0,0,0,0.290692833264657,0,0.169229215783353,0,0,0,0.561142271657738,0,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0.220591419119515,0|short_description=p4@Chmp6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:208092 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B1AZ42 | |||
|association_with_transcript=-6bp_to_ENSMUST00000132197_5end | |||
|cluster_id=chr11:119774737..119774748,+ | |||
|description=CAGE_peak_4_at_Chmp6_5end | |||
|id=chr11:119774737..119774748,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.85e-11!25;CL:0000223!3.65e-08!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.43e-20,6;CL:0000677,2.43e-20,6;CL:0000584,2.43e-20,6;CL:0000075,2.39e-17,7;CL:0000066,3.09e-17,25;CL:0002076,1.22e-16,15;CL:0002563,2.36e-13,9;CL:0002251,2.36e-13,9;CL:0000223,4.28e-12,20;CL:0000682,3.58e-11,3;CL:0000068,5.59e-10,3;CL:0002202,5.59e-10,3;CL:0000069,5.59e-10,3;CL:0002632,5.59e-10,3;CL:0002368,5.59e-10,3;CL:0000307,5.59e-10,3;CL:0000377,5.59e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.07e-11!15;UBERON:0001242!2.09e-09!13;UBERON:0000060!2.09e-09!13;UBERON:0001262!2.09e-09!13;UBERON:0004786!2.09e-09!13;UBERON:0004119!3.75e-09!130;UBERON:0000925!3.75e-09!130;UBERON:0006595!3.75e-09!130;UBERON:0001007!1.74e-08!128;UBERON:0001555!1.74e-08!128;UBERON:0007026!1.74e-08!128;UBERON:0000160!3.63e-08!43;UBERON:0004923!5.51e-08!24;UBERON:0004921!1.33e-07!126;UBERON:0004185!1.33e-07!126;UBERON:0005409!1.66e-07!59;UBERON:0000485!2.48e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,2.76e-30,15;UBERON:0004923,8.03e-25,24;UBERON:0001242,3.14e-24,13;UBERON:0001262,3.14e-24,13;UBERON:0004786,3.14e-24,13;UBERON:0000160,2.63e-15,31;UBERON:0003350,2.36e-13,9;UBERON:0004808,2.36e-13,9;UBERON:0001277,2.36e-13,9;UBERON:0005409,7.80e-11,47;UBERON:0000485,8.30e-11,11;UBERON:0000331,3.63e-10,3;UBERON:0002116,3.63e-10,3;UBERON:0001204,3.63e-10,3;UBERON:0001168,3.63e-10,3;UBERON:0003126,5.59e-10,3;UBERON:0001005,5.59e-10,3;UBERON:0007196,5.59e-10,3;UBERON:0001558,5.59e-10,3;UBERON:0001962,6.83e-08,2;UBERON:0001961,6.83e-08,2;UBERON:0001744,6.83e-08,2;UBERON:0002108,9.84e-08,4;UBERON:0004119,4.18e-07,118;UBERON:0000925,4.18e-07,118;UBERON:0006595,4.18e-07,118 | |||
|phase1_expression=0.80074423552397,8.72438519098403,5.0049916332849,4.83942738090928,5.50985302940982,2.51818907867835,2.56973904655078,0.258246646883153,0.422366166455,0.234064526321993,0.171217968225505,0.0797721589953364,0.513602189793617,0,0,0,0,0,0,0.42438965179803,0.0850432901510698,0.0992909512008853,0.261199789138935,3.03985603307473,5.27641346454491,9.76194338995534,4.73838195774982,4.09395342103189,1.71021077510736,1.51218077855958,4.8780712344167,0,0,0,0.288851619751275,0.166234645358492,0.816677425049476,0.418531630736908,0,0,0,0,0,0.629484089877886,0.202753862439029,0.183546752161682,0.782391344348039,0,0,0,0.279972843250725,0,0,0.725362142011344,0.336093799142464,0,0,0,0.202316460859598,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0,0,0,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0,0.395658863190582,0.0914876436024097,0.52091337055676,0,0.56276261003168,0,0,0.142371680799103,0,0.151452386666368,0.151143120213571,0.869593466105033,0,0.679971333707751,0.539703191637817,0.649776417447669,0.448026887097336,0.140444420131752,0.340860645156116,0.519572009205738,0,0.281686839553361,0,0,0,1.94841936910093,1.52015919285059,2.52762222507392,0.68510327831436,0,0,0.173485326766136,0.304465478312141,0,0.301445281105245,0.117588707135705,0.251333182659351,2.71914464507811,0.144599356919912,0,0.161766849947409,0.220841518460394,0,1.86391761218122,0,0,0,0,0,0.127070227073065,0.149790639404823,0,0.125654352112864,0,0,0,0,0.203678727700633,0,0,0,0.260240885925407,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.205782136407943,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0,0,0.134206418760372,0,0,3.96502539580558,0.264450566663544,0,0.464473343720877,0,0,1.11189021922435,0,0.474529061544512,0.823494773620054,0.754005626400808,0.795825888164603,1.16978452271472,0,0.216138049874694,0.995706366271836,0,0,0,0,0.193952487167626,0.0701358198903186,0.316182685621286,0.147610147979602,0.470996183524124,0.370191491765402,0,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0.744281895337007,0.312037673114561,0.252578877947112,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0.160550589987792,0,0.163934945376675,0,0,0,0,0.238968797952552,0,0,0,0.292255857911312,0,0,0,0,0,0,1.32745138339963,0,0,0,0.295301892880773,0,0.516856586336442,0,0.356497378384721,0,0,1.03135543248187,0,0.36012218806262,0,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0.23467170806371,2.75381692122966,0.220528398054962,0.32977250588296,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0.874442509889552,0,0,0.206386867963223,0,0,0,0,0.169978429993855,0.419854356970974,0.138199973804424,0.954670618015114,0,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0.247960367176008,0.785267825952089,2.46268449254406,0,0,0,0,0,0,0.506868376472335,0,0,0,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0.25984164595559,0.179026695667481,0.198681354781265,0.600977247599844,0.295379054349154,0.100966449948148,0.304827226619999,0.100826185136841,0.194915761479505,0.192423683280659,0.350630706544707,0.226730383615211,0.887943813496259,1.52513556236109,1.34307693091263,0.19318959403219,0.375364950902364,0,0.214368379079066,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0,0,0.187283014939765,0.192075457214608,0.17230640686684,0,0,0,0,0.147198920134397,0,0,0,0.290692833264657,0,0.169229215783353,0,0,0,0.561142271657738,0,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p4@Chmp6 | |||
}} |
Revision as of 14:37, 5 August 2015
Short description: | p4@Chmp6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Chmp6_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -6bp_to_ENSMUST00000132197_5end |
EntrezGene: | 208092 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.43e-20 | 6 |
gut absorptive cell | 2.43e-20 | 6 |
enterocyte | 2.43e-20 | 6 |
columnar/cuboidal epithelial cell | 2.39e-17 | 7 |
epithelial cell | 3.09e-17 | 25 |
endo-epithelial cell | 1.22e-16 | 15 |
intestinal epithelial cell | 2.36e-13 | 9 |
epithelial cell of alimentary canal | 2.36e-13 | 9 |
endodermal cell | 4.28e-12 | 20 |
M cell of gut | 3.58e-11 | 3 |
duct epithelial cell | 5.59e-10 | 3 |
epithelial cell of tracheobronchial tree | 5.59e-10 | 3 |
branched duct epithelial cell | 5.59e-10 | 3 |
epithelial cell of lower respiratory tract | 5.59e-10 | 3 |
respiratory epithelial cell | 5.59e-10 | 3 |
tracheal epithelial cell | 5.59e-10 | 3 |
tracheoblast | 5.59e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 2.76e-30 | 15 |
organ component layer | 8.03e-25 | 24 |
intestinal mucosa | 3.14e-24 | 13 |
wall of intestine | 3.14e-24 | 13 |
gastrointestinal system mucosa | 3.14e-24 | 13 |
intestine | 2.63e-15 | 31 |
epithelium of mucosa | 2.36e-13 | 9 |
gastrointestinal system epithelium | 2.36e-13 | 9 |
intestinal epithelium | 2.36e-13 | 9 |
gastrointestinal system | 7.80e-11 | 47 |
simple columnar epithelium | 8.30e-11 | 11 |
ileal mucosa | 3.63e-10 | 3 |
ileum | 3.63e-10 | 3 |
mucosa of small intestine | 3.63e-10 | 3 |
wall of small intestine | 3.63e-10 | 3 |
trachea | 5.59e-10 | 3 |
respiratory airway | 5.59e-10 | 3 |
tracheobronchial tree | 5.59e-10 | 3 |
lower respiratory tract | 5.59e-10 | 3 |
gut-associated lymphoid tissue | 6.83e-08 | 2 |
mucosa-associated lymphoid tissue | 6.83e-08 | 2 |
lymphoid tissue | 6.83e-08 | 2 |
small intestine | 9.84e-08 | 4 |
endoderm-derived structure | 4.18e-07 | 118 |
endoderm | 4.18e-07 | 118 |
presumptive endoderm | 4.18e-07 | 118 |