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FFCP PHASE1:Mm9::chr18:3383221..3383261,+: Difference between revisions

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{{FFCP|EntrezGene=71745|HGNC=|UniProt=Q9D4H8,E0CYT5,Q571A2|association_with_transcript=0bp_to_ENSMUST00000080089,ENSMUST00000115872,ENSMUST00000161317,ENSMUST00000162301,NM_029402,uc008dya.2,uc008dyb.2_5end|description=CAGE_peak_1_at_Cul2_5end|id=chr18:3383221..3383261,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!1.12e-08!114;UBERON:0007100!2.53e-08!18;UBERON:0000948!2.53e-08!18;UBERON:0005498!2.53e-08!18;UBERON:0004140!2.53e-08!18;UBERON:0009881!2.53e-08!18;UBERON:0004141!2.53e-08!18;UBERON:0003084!2.53e-08!18;UBERON:0007005!2.53e-08!18;UBERON:0004139!2.53e-08!18;UBERON:0004291!2.53e-08!18;UBERON:0004111!3.72e-08!122;UBERON:0003914!1.27e-07!47;UBERON:0002021!9.42e-07!10;UBERON:0000411!9.42e-07!10;UBERON:0001950!9.42e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000025,1.12e-08,114;UBERON:0007100,2.53e-08,18;UBERON:0000948,2.53e-08,18;UBERON:0005498,2.53e-08,18;UBERON:0004140,2.53e-08,18;UBERON:0009881,2.53e-08,18;UBERON:0004141,2.53e-08,18;UBERON:0003084,2.53e-08,18;UBERON:0007005,2.53e-08,18;UBERON:0004139,2.53e-08,18;UBERON:0004291,2.53e-08,18;UBERON:0004111,3.72e-08,122;UBERON:0003914,1.27e-07,47;UBERON:0010314,3.61e-07,92;UBERON:0002021,9.42e-07,10;UBERON:0000411,9.42e-07,10;UBERON:0001950,9.42e-07,10|phase1_expression=23.0614339830903,10.1202868215415,7.73498706962211,14.215817931421,11.0197060588196,12.255186849568,14.9512089981136,23.1130748960421,17.317012824655,20.5976783163354,32.3601959946204,30.3134204182278,28.0769197087177,24.8273942869953,25.3163418979904,20.4500020063724,19.5877325875881,33.123527362615,28.9311454908109,24.1902101524877,19.9851731855014,18.5674078745655,25.3363795464767,19.0390983124154,17.8939239232393,7.46501553349526,7.32295393470427,11.4199753323521,18.4322716872683,18.3981994724749,13.5255611499736,16.5107975099504,13.5314253268605,0,12.9983228888074,17.7871070533587,17.150225926039,17.1597968602132,19.533383613095,15.1821885752402,14.7057872007754,12.9778642142105,16.5073520030592,17.2478640626541,14.8010319580491,17.2533947031981,8.60630478782843,9.15705656797875,5.4921545683618,13.026803237977,11.7588594165305,14.3752564364972,29.0263908479884,24.6623128283857,33.2732861151039,25.7259436035947,25.2149427146106,38.6754069208082,19.2200637816618,27.5075309221457,22.8179305262225,5.42151251310611,4.4464739805557,8.99899717281399,11.8663963508037,9.9467216092454,7.78960287347852,9.98967593836042,21.6711289724718,13.9056116481641,18.5085965989216,22.8520787523043,19.6573001446936,21.6808714610469,14.3768206527355,13.7882817991503,42.9451935897616,36.7739533685341,38.2480267808046,22.9482140650537,21.8655468209759,18.2319679694866,28.7558488971422,30.9519435517424,35.4491934842199,30.6413728892614,29.4709379254143,25.1639251864156,24.4595604466185,24.7119001549189,24.6384815396426,28.3939879403858,8.83962733820076,51.2718032055926,38.3368086294125,45.6987424839282,30.4764391685902,30.3365974188943,23.9003124234639,24.3804306412135,21.2673563862788,21.815501160434,20.3844191765317,35.5533351576666,23.1645413881999,24.0691872201344,17.6933555755174,23.2935114626882,34.1798006414267,27.9071221441871,23.4205191134283,19.485790611977,22.1390877365816,28.1851337833404,26.5750478126693,28.7776494144957,55.8660627079685,34.9930443746186,15.9229899350977,24.912094891901,24.2925670306433,25.6983884161668,18.6391761218122,26.0574909340277,20.9446706813455,17.3710797541842,13.4192939446631,14.9975682748352,16.0108486112061,41.4920071151359,38.8875512395833,26.5130682958144,40.848715245185,34.5215867395946,34.7006034414465,29.2034273521964,20.1641940423626,19.9051152976149,22.492325500597,22.5172785798527,28.2361361229067,27.1284483231498,28.6298786390505,27.8803912996073,22.7241907165435,26.9038812598185,23.9876414872906,29.4921842642478,21.1256633074185,26.8530633838303,27.2724242454121,24.769117764316,23.0779216857246,26.4671646556847,27.5748062786644,27.0686602873151,18.2575428701441,12.3526995415063,19.6072814582959,37.0755132838548,30.4883877975425,34.5719158005149,39.0628813715597,32.4660982383216,31.4704910290252,36.9728972153149,37.5582761959467,30.2422236730969,39.6589238291488,35.6243397051637,35.2649321524472,36.1113968940571,37.5430697147697,35.2962881339778,34.2772616159527,23.873870071994,20.4859645449955,22.4782981664013,25.1680135631576,28.7973473106944,30.5415883333361,29.445794595008,29.131523743678,32.5285820652476,20.404749646414,24.3754452991536,23.3741744184251,21.089386036362,25.5402954126047,18.8752075817387,22.9106332867176,21.9055400579804,19.9151296000736,27.6481400515544,32.6852433451933,24.4381593414377,26.7654432291324,20.9706101472052,24.6622494784603,23.9128439726956,27.9457735557647,26.5303902431871,29.3488100816277,27.3625973374394,30.2700852474333,28.3326261604916,24.7489348093974,28.2177276910328,29.0273471030819,25.0295639582205,16.8620635846037,31.8491239298175,83.3855597858656,21.9563159124417,30.2676542921124,33.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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:71745
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q9D4H8,uniprot:E0CYT5,uniprot:Q571A2
|association_with_transcript=0bp_to_ENSMUST00000080089,ENSMUST00000115872,ENSMUST00000161317,ENSMUST00000162301,NM_029402,uc008dya.2,uc008dyb.2_5end
|cluster_id=chr18:3383221..3383261,+
|description=CAGE_peak_1_at_Cul2_5end
|id=chr18:3383221..3383261,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000025!1.12e-08!114;UBERON:0007100!2.53e-08!18;UBERON:0000948!2.53e-08!18;UBERON:0005498!2.53e-08!18;UBERON:0004140!2.53e-08!18;UBERON:0009881!2.53e-08!18;UBERON:0004141!2.53e-08!18;UBERON:0003084!2.53e-08!18;UBERON:0007005!2.53e-08!18;UBERON:0004139!2.53e-08!18;UBERON:0004291!2.53e-08!18;UBERON:0004111!3.72e-08!122;UBERON:0003914!1.27e-07!47;UBERON:0002021!9.42e-07!10;UBERON:0000411!9.42e-07!10;UBERON:0001950!9.42e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000025,1.12e-08,114;UBERON:0007100,2.53e-08,18;UBERON:0000948,2.53e-08,18;UBERON:0005498,2.53e-08,18;UBERON:0004140,2.53e-08,18;UBERON:0009881,2.53e-08,18;UBERON:0004141,2.53e-08,18;UBERON:0003084,2.53e-08,18;UBERON:0007005,2.53e-08,18;UBERON:0004139,2.53e-08,18;UBERON:0004291,2.53e-08,18;UBERON:0004111,3.72e-08,122;UBERON:0003914,1.27e-07,47;UBERON:0010314,3.61e-07,92;UBERON:0002021,9.42e-07,10;UBERON:0000411,9.42e-07,10;UBERON:0001950,9.42e-07,10
|phase1_expression=23.0614339830903,10.1202868215415,7.73498706962211,14.215817931421,11.0197060588196,12.255186849568,14.9512089981136,23.1130748960421,17.317012824655,20.5976783163354,32.3601959946204,30.3134204182278,28.0769197087177,24.8273942869953,25.3163418979904,20.4500020063724,19.5877325875881,33.123527362615,28.9311454908109,24.1902101524877,19.9851731855014,18.5674078745655,25.3363795464767,19.0390983124154,17.8939239232393,7.46501553349526,7.32295393470427,11.4199753323521,18.4322716872683,18.3981994724749,13.5255611499736,16.5107975099504,13.5314253268605,0,12.9983228888074,17.7871070533587,17.150225926039,17.1597968602132,19.533383613095,15.1821885752402,14.7057872007754,12.9778642142105,16.5073520030592,17.2478640626541,14.8010319580491,17.2533947031981,8.60630478782843,9.15705656797875,5.4921545683618,13.026803237977,11.7588594165305,14.3752564364972,29.0263908479884,24.6623128283857,33.2732861151039,25.7259436035947,25.2149427146106,38.6754069208082,19.2200637816618,27.5075309221457,22.8179305262225,5.42151251310611,4.4464739805557,8.99899717281399,11.8663963508037,9.9467216092454,7.78960287347852,9.98967593836042,21.6711289724718,13.9056116481641,18.5085965989216,22.8520787523043,19.6573001446936,21.6808714610469,14.3768206527355,13.7882817991503,42.9451935897616,36.7739533685341,38.2480267808046,22.9482140650537,21.8655468209759,18.2319679694866,28.7558488971422,30.9519435517424,35.4491934842199,30.6413728892614,29.4709379254143,25.1639251864156,24.4595604466185,24.7119001549189,24.6384815396426,28.3939879403858,8.83962733820076,51.2718032055926,38.3368086294125,45.6987424839282,30.4764391685902,30.3365974188943,23.9003124234639,24.3804306412135,21.2673563862788,21.815501160434,20.3844191765317,35.5533351576666,23.1645413881999,24.0691872201344,17.6933555755174,23.2935114626882,34.1798006414267,27.9071221441871,23.4205191134283,19.485790611977,22.1390877365816,28.1851337833404,26.5750478126693,28.7776494144957,55.8660627079685,34.9930443746186,15.9229899350977,24.912094891901,24.2925670306433,25.6983884161668,18.6391761218122,26.0574909340277,20.9446706813455,17.3710797541842,13.4192939446631,14.9975682748352,16.0108486112061,41.4920071151359,38.8875512395833,26.5130682958144,40.848715245185,34.5215867395946,34.7006034414465,29.2034273521964,20.1641940423626,19.9051152976149,22.492325500597,22.5172785798527,28.2361361229067,27.1284483231498,28.6298786390505,27.8803912996073,22.7241907165435,26.9038812598185,23.9876414872906,29.4921842642478,21.1256633074185,26.8530633838303,27.2724242454121,24.769117764316,23.0779216857246,26.4671646556847,27.5748062786644,27.0686602873151,18.2575428701441,12.3526995415063,19.6072814582959,37.0755132838548,30.4883877975425,34.5719158005149,39.0628813715597,32.4660982383216,31.4704910290252,36.9728972153149,37.5582761959467,30.2422236730969,39.6589238291488,35.6243397051637,35.2649321524472,36.1113968940571,37.5430697147697,35.2962881339778,34.2772616159527,23.873870071994,20.4859645449955,22.4782981664013,25.1680135631576,28.7973473106944,30.5415883333361,29.445794595008,29.131523743678,32.5285820652476,20.404749646414,24.3754452991536,23.3741744184251,21.089386036362,25.5402954126047,18.8752075817387,22.9106332867176,21.9055400579804,19.9151296000736,27.6481400515544,32.6852433451933,24.4381593414377,26.7654432291324,20.9706101472052,24.6622494784603,23.9128439726956,27.9457735557647,26.5303902431871,29.3488100816277,27.3625973374394,30.2700852474333,28.3326261604916,24.7489348093974,28.2177276910328,29.0273471030819,25.0295639582205,16.8620635846037,31.8491239298175,83.3855597858656,21.9563159124417,30.2676542921124,33.845569644913,41.4408025235617,39.0779252304327,24.5721742921584,33.1609970598348,28.1929409244705,28.1776842386812,31.4484932706593,26.1309761609233,21.1858840388552,21.6598349122157,29.0048665155391,29.8977331025846,24.0776700672806,21.3022309130459,23.8305274974936,21.6973587872267,18.0949540727127,12.5098307278303,18.1952781017043,22.9027499432928,33.8761744874241,32.3504254994481,18.0328439914343,41.6577029887215,24.609641114468,24.5976408906882,26.9279247165999,24.3748173911603,20.943075363745,26.0430408325726,23.074209995469,23.380468632905,25.2984177885775,33.7387382242897,32.3623394274852,16.738166744722,22.9670612688542,20.6212653715669,25.2215762845929,26.463089340893,16.3254720760966,20.5579536933929,12.993283286754,26.4394227231778,23.0001180919717,21.0849563096953,23.1723295950069,21.4904995396355,20.0295356292498,19.5957532171555,26.8947288545492,24.3082476942269,10.7367707539686,26.1491182738543,27.4877362145524,25.5067409170961,28.4669805641669,16.1366423030738,24.4058576386259,27.3263371414328,31.0945041257496,17.6428290647384,23.896735150994,24.1251699712623,19.4576920725112,22.9797259643086,22.7355052571284,34.3036808719443,18.2831842453702,23.9408766837338,24.8160666675414,20.5321618135113,19.2738861086645,19.6749228957609,16.487907709404,17.9137858974282,18.3805965159884,17.184071124272,30.6845913773701,32.3277952731689,27.9733832728465,25.9269487057941,29.0422209782416,24.5453110420374,24.7960367176008,24.3433026045148,23.2010802192309,19.2615187056947,36.6400410144724,24.3711970051685,24.9842320590217,23.3341426012857,21.0530512268702,22.8090769412551,24.8797345928998,19.1400445720607,20.9718688851422,30.1980151032508,35.4276907697175,21.4887562027161,19.4616206678558,20.9530352616248,21.0471733224028,20.9461233930953,21.0602236068141,21.0342036659945,20.8242233316154,21.3039209390592,19.66135611699,20.1652370273681,19.1017446249915,21.1666051608725,19.4015657621404,30.3818714044383,37.5156261202169,27.9907232621564,30.8907694109904,20.4780969674122,24.2110393332025,27.1064403915552,25.7242054894879,22.069172577556,49.6981621503019,55.6993536173684,47.5503276154699,31.7928387335822,34.9392085083028,37.0143009720953,29.7009900101995,40.9792294934041,40.7828168085784,47.6339486811674,25.6354748532916,28.7297908848742,28.5125121609404,25.2830985751026,24.9439663527299,23.7158125900518,29.1143213420116,32.1414689292675,34.3383554263242,29.8182709881281,26.8688057883654,23.3896663318734,25.7514145542177,24.7137088282795,24.4675097750913,28.5776214769844,32.5634955905044,22.5703787942535,24.3130681473951,34.0029505510458,33.2583174813853,28.7510805978127,22.4130018550482,31.6855188258476,29.6444548308291,27.2459037411198,28.5367637681525,41.3019446957413,27.0250186553265,23.567975409625,24.557448751704,25.5126609352709,34.7846386694236,29.2830629841476,30.4792445350203,24.4814366379187,29.7093142725669,24.495300161506,26.9716548217069,26.4709702943419,30.3746864662752
|short_description=p1@Cul2
}}

Revision as of 15:53, 5 August 2015

Short description:p1@Cul2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cul2_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000080089, ENSMUST00000115872, ENSMUST00000161317, ENSMUST00000162301, NM_029402, uc008dya.2, uc008dyb.2_5end
EntrezGene:71745
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cul2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G723.06
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I314.22
CD326+ enterocyte, pool2.CNhs13197.11849-124I411.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I712.26
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I814.95
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E923.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E717.32
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F220.60
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E632.36
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F130.31
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E428.08
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E824.83
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A125.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A320.45
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A519.59
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A233.12
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A428.93
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A624.19
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A319.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H218.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I925.34
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D119.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D217.89
GP2+ M cell, pool1.CNhs13228.11845-124H97.47
GP2+ M cell, pool2.CNhs13231.11846-124I17.32
GP2+ M cell, pool3.CNhs13240.11847-124I211.42
Ileum epithelium, pool1.CNhs13199.10252-104B918.43
Ileum epithelium, pool2.CNhs13232.10253-104C118.40
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C813.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I316.51
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G613.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F513.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F617.79
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F717.15
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G817.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H119.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H315.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G914.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.98
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H416.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D817.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D914.80
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B317.25
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B78.61
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.16
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.49
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.03
Mouse Astrocytes, donor2.CNhs12078.11552-120C411.76
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A229.03
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I924.66
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A133.27
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C125.73
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E125.21
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C538.68
Mouse Granule cells, donor1.CNhs12131.11713-123C319.22
Mouse Granule cells, donor2.CNhs12357.11731-123E327.51
Mouse Granule cells, donor3.CNhs12108.11636-122C722.82
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.42
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E711.87
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.95
Mouse Microglia, donor1.CNhs12629.11718-123C87.79
Mouse Microglia, donor2.CNhs12634.11736-123E89.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D521.67
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F513.91
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D918.51
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F122.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D519.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D221.68
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D613.79
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D342.95
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F336.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D738.25
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D422.95
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F421.87
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D818.23
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E428.76
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E530.95
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I635.45
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D630.64
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F629.47
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E125.16
Mouse Schwann, donor1.CNhs12507.11728-123D924.46
Mouse Schwann, donor2.CNhs12573.11746-123F924.71
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G324.64
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F728.39
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.84
Mouse hepatocyte, donor3.CNhs12615.11637-122C851.27
Mouse hepatocyte, donor6.CNhs13090.11822-124F438.34
Mouse hepatocyte, donor8.CNhs13091.11824-124F645.70
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A730.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I730.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E323.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I824.38
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G621.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H121.82
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G123.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G224.07
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G317.69
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B623.29
accessory axillary lymph node, adult.CNhs10475.1063-29H934.18
adrenal gland, adult.CNhs10508.49-24D727.91
adrenal gland, embryo E14.CNhs11038.406-44C523.42
adrenal gland, embryo E16.CNhs11004.1254-43D619.49
adrenal gland, embryo E17.CNhs11043.1263-45I122.14
adrenal gland, embryo E18.CNhs11026.1262-18F528.19
adrenal gland, neonate N00.CNhs11191.1311-23C126.58
adrenal gland, neonate N25.CNhs11223.1377-27I328.78
amnion, adult pregnant day17.5.CNhs10488.583-22A855.87
aorta, adult.CNhs10498.46-23H134.99
bone (os femoris), adult.CNhs10483.56-12G215.92
bone (os femoris), neonate N02.CNhs11227.1985-43F524.91
bone (os femoris), neonate N16.CNhs11225.1525-43A624.29
bone (os femoris), neonate N20.CNhs11195.1350-25C325.70
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B226.06
cerebellum, neonate N30.CNhs11135.1395-42I220.94
colon, adult.CNhs10468.36-18H717.37
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C713.42
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D115.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D416.01
corpora quadrigemina, adult.CNhs10501.16-22A441.49
corpus striatum, adult.CNhs10487.19-21D838.89
corpus striatum, neonate N00.CNhs11226.630-43F126.51
cortex, adult.CNhs10473.12-14D540.85
cortex, neonate N30.CNhs11107.1392-42F234.52
diencephalon, adult.CNhs10482.20-12F234.70
diencephalon, neonate N30.CNhs11201.1388-42B229.20
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B120.16
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A219.91
epididymis, adult.CNhs10490.58-23B222.49
eyeball, adult.CNhs10484.31-12G422.52
eyeball, embryo E12.CNhs11016.345-16C628.24
eyeball, embryo E14.CNhs10521.399-16E227.13
eyeball, embryo E15.CNhs10593.426-16C928.63
eyeball, embryo E17.CNhs11023.1261-18D427.88
eyeball, neonate N00.CNhs11207.633-15C622.72
eyeball, neonate N01.CNhs11140.1532-43E726.90
eyeball, neonate N02.CNhs11205.1551-44G823.99
eyeball, neonate N16.CNhs11188.777-19A229.49
forelimb, embryo E11.CNhs10596.335-25E221.13
forelimb, embryo E12.CNhs10600.359-14H226.85
forelimb, embryo E13.CNhs10589.384-1E227.27
forelimb, embryo E14.CNhs10577.413-26A824.77
forelimb, embryo E15.CNhs11007.437-20E723.08
forelimb, embryo E17.CNhs10598.1517-43C426.47
forelimb, embryo E18.CNhs11008.1520-43B527.57
gonad, embryo E13.CNhs11044.1564-45I627.07
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C818.26
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D212.35
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D519.61
heart, embryo E11.CNhs10586.331-24E937.08
heart, embryo E12.CNhs11015.353-12F530.49
heart, embryo E13.CNhs11013.376-3I934.57
heart, embryo E14.CNhs10597.403-26D439.06
heart, embryo E15.CNhs11017.431-16C832.47
heart, embryo E16.CNhs11021.457-17C631.47
heart, embryo E17.CNhs11025.479-18E536.97
heart, embryo E18.CNhs11030.1283-20G337.56
heart, neonate N00.CNhs11213.639-21E330.24
heart, neonate N03.CNhs11221.1349-25I239.66
heart, neonate N10.CNhs11118.749-24G135.62
heart, neonate N16.CNhs11209.782-15G135.26
heart, neonate N20.CNhs11127.821-26I636.11
heart, neonate N25.CNhs11196.1351-25D337.54
heart, neonate N30.CNhs11202.1390-42D235.30
hippocampus, adult.CNhs10478.13-16E834.28
hippocampus, neonate N00.CNhs11228.627-43G123.87
intestinal mucosa, adult.CNhs10506.860-29I320.49
intestine, adult.CNhs10496.178-9A322.48
intestine, embryo E12.CNhs11019.1251-16I525.17
intestine, embryo E13.CNhs11010.381-16D528.80
intestine, embryo E15.CNhs10602.976-16D830.54
intestine, embryo E16.CNhs10585.463-22H429.45
intestine, embryo E17.CNhs10582.482-18D329.13
intestine, embryo E18.CNhs10526.1289-20F732.53
intestine, neonate N00.CNhs11126.644-26D120.40
intestine, neonate N01.CNhs11192.1322-23E924.38
intestine, neonate N06.CNhs11102.688-20B823.37
intestine, neonate N07.CNhs11095.720-20F221.09
intestine, neonate N10.CNhs11098.755-23A525.54
intestine, neonate N20.CNhs11187.827-18D118.88
intestine, neonate N25.CNhs11121.1352-25E322.91
intestine, neonate N30.CNhs11131.1384-42G121.91
kidney, embryo E14.CNhs10606.411-4I919.92
kidney, embryo E15.CNhs10997.434-16F827.65
kidney, embryo E16.CNhs10584.464-22A532.69
kidney, embryo E17.CNhs11028.483-18I224.44
kidney, embryo E18.CNhs11001.1288-20C726.77
kidney, neonate N00.CNhs11214.646-21G720.97
kidney, neonate N10.CNhs11206.758-6D524.66
kidney, neonate N20.CNhs11113.832-19I123.91
kidney, neonate N25.CNhs11122.1353-25F327.95
kidney, neonate N30.CNhs11203.1385-42H126.53
liver, adult pregnant day01.CNhs10466.508-5B229.35
liver, embryo E12.CNhs10601.355-15F827.36
liver, embryo E13.CNhs10524.378-3H630.27
liver, embryo E14.CNhs10594.409-16E128.33
liver, embryo E15.CNhs10520.433-16D724.75
liver, embryo E16.CNhs10523.462-17F528.22
liver, embryo E17.CNhs10510.481-18A329.03
liver, embryo E18.CNhs10579.499-43G425.03
liver, neonate N00.CNhs11117.641-24F416.86
liver, neonate N03.CNhs11123.1345-25G231.85
liver, neonate N06.CNhs11101.684-20A883.39
liver, neonate N07.CNhs11103.716-20H221.96
liver, neonate N10.CNhs11115.751-24B930.27
liver, neonate N20.CNhs11220.823-25A333.85
liver, neonate N25.CNhs11198.1368-26H141.44
liver, neonate N30.CNhs11106.1382-42D139.08
lung, adult.CNhs10474.28-22B124.57
lung, embryo E12.CNhs10522.354-16G233.16
lung, embryo E14.CNhs10604.404-26F828.19
lung, embryo E15.CNhs11020.432-17C528.18
lung, embryo E16.CNhs10998.458-17B631.45
lung, embryo E17.CNhs10605.480-44A626.13
lung, embryo E18.CNhs10583.1287-20I621.19
lung, neonate N00.CNhs11224.640-42C621.66
lung, neonate N06.CNhs11212.683-20E529.00
lung, neonate N07.CNhs11111.715-19A329.90
lung, neonate N10.CNhs11219.750-23E624.08
lung, neonate N20.CNhs11109.822-18A421.30
lung, neonate N25.CNhs11119.1359-25C723.83
lung, neonate N30.CNhs11133.1394-42H221.70
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A118.09
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A112.51
mammary gland, adult lactating day02.CNhs10480.595-22B618.20
mammary gland, adult pregnant day19.CNhs10476.588-5H222.90
medulla oblongata, adult.CNhs10477.17-12C233.88
medulla oblongata, neonate N30.CNhs11200.1396-42A332.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C718.03
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C241.66
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E124.61
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E224.60
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E326.93
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D724.37
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D820.94
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D926.04
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D423.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D523.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D625.30
olfactory brain, adult.CNhs10489.18-22I933.74
ovary, adult.CNhs10507.91-2I732.36
ovary, embryo E18.CNhs11040.505-44H716.74
ovary, neonate N00.CNhs11217.1299-22I422.97
oviduct, adult pregnant day01.CNhs10500.988-6G620.62
pancreas, adult.CNhs10486.34-16E425.22
pancreas, embryo E14.CNhs11012.405-44F426.46
pancreas, embryo E15.CNhs11042.1556-45F216.33
pancreas, embryo E16.CNhs11003.460-26E520.56
pancreas, embryo E17.CNhs10599.1558-45G312.99
pancreas, embryo E18.CNhs10580.1535-43I726.44
pancreas, neonate N00.CNhs11105.645-26G923.00
pancreas, neonate N01.CNhs11138.1531-43D721.08
pancreas, neonate N02.CNhs11139.1539-43D823.17
pancreas, neonate N16.CNhs11136.787-43B621.49
pancreas, neonate N25.CNhs11094.1555-45E220.03
pancreas, neonate N30.CNhs11182.1548-44H519.60
pituitary gland, adult.CNhs10493.21-1G826.89
pituitary gland, embryo E12.CNhs11018.346-16E624.31
pituitary gland, embryo E13.CNhs11009.370-44C710.74
pituitary gland, embryo E14.CNhs11037.398-44A526.15
pituitary gland, embryo E15.CNhs10592.427-16B927.49
pituitary gland, embryo E16.CNhs11036.449-43F625.51
pituitary gland, embryo E17.CNhs11039.1265-44F528.47
pituitary gland, neonate N00.CNhs11190.1308-22E916.14
placenta, adult pregnant day10.CNhs10472.539-13I724.41
placenta, adult pregnant day17.CNhs10464.577-18G327.33
prostate, adult.CNhs10470.859-1F831.09
skin, adult.CNhs10492.30-1C317.64
skin, neonate N00.CNhs11124.650-25G423.90
skin, neonate N03.CNhs11215.662-22H324.13
skin, neonate N06.CNhs11097.693-20I519.46
skin, neonate N10.CNhs11108.762-6C422.98
small intestine, neonate N16.CNhs11114.790-21I122.74
spinal cord, adult.CNhs10505.24-13C934.30
spleen, adult.CNhs10465.25-2G218.28
spleen, embryo E16.CNhs11035.461-43C123.94
spleen, embryo E18.CNhs11011.1271-21F224.82
spleen, neonate N10.CNhs11116.752-24D120.53
spleen, neonate N20.CNhs11112.824-19H119.27
spleen, neonate N25.CNhs11099.1354-25G319.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C616.49
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C917.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D318.38
stomach, adult.CNhs10503.33-1H617.18
stomach, embryo E12.CNhs10588.356-43E330.68
stomach, embryo E15.CNhs10603.1252-16G832.33
stomach, embryo E16.CNhs11022.459-17D427.97
stomach, embryo E17.CNhs11006.1035-18D525.93
stomach, embryo E18.CNhs10999.1286-20C629.04
stomach, neonate N03.CNhs11193.1340-24B824.55
stomach, neonate N07.CNhs11210.718-18A924.80
stomach, neonate N25.CNhs11104.1355-25E424.34
stomach, neonate N30.CNhs11134.1386-42I123.20
submandibular gland, adult.CNhs10469.59-29C119.26
testis, adult.CNhs10504.57-7G536.64
testis, embryo E13.CNhs11031.389-23F524.37
testis, embryo E15.CNhs11034.443-27C524.98
testis, embryo E16.CNhs11033.470-26G523.33
testis, embryo E17.CNhs11029.486-18I521.05
testis, embryo E18.CNhs11027.503-18G522.81
testis, neonate N00.CNhs11189.1300-22B724.88
testis, neonate N07.CNhs11222.726-26I419.14
testis, neonate N10.CNhs11204.763-44D920.97
testis, neonate N20.CNhs11110.839-18H330.20
testis, neonate N30.CNhs11130.1391-42E235.43
thymus, adult.CNhs10471.38-12B521.49
thymus, embryo E14.CNhs11041.402-44I419.46
thymus, embryo E15.CNhs11005.430-45I220.95
thymus, embryo E16.CNhs11002.456-26C521.05
thymus, embryo E17.CNhs10581.478-18C120.95
thymus, embryo E18.CNhs10595.1273-19G421.06
thymus, neonate N02.CNhs11181.1541-43F821.03
thymus, neonate N03.CNhs11137.2104-43C720.82
thymus, neonate N06.CNhs11197.681-26C421.30
thymus, neonate N07.CNhs11211.713-19D319.66
thymus, neonate N10.CNhs11194.748-24E420.17
thymus, neonate N20.CNhs11186.820-7A219.10
thymus, neonate N25.CNhs11125.1362-25G721.17
thymus, neonate N30.CNhs11132.1393-42G219.40
tongue, adult.CNhs10499.32-1B430.38
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H337.52
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F727.99
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G530.89
urinary bladder, adult.CNhs10481.879-12E420.48
uterus, adult pregnant day19.CNhs10497.590-15F524.21
uterus, adult.CNhs10509.92-27E527.11
vagina, adult.CNhs10502.89-27D525.72
vesicular gland, adult.CNhs10491.51-27F822.07
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A149.70
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A255.70
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A347.55
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D731.79
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A434.94
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A537.01
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A629.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A740.98
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A840.78
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A947.63
whole body, embryo E11.CNhs11014.324-5I825.64
whole body, embryo E12.CNhs10587.857-27C928.73
whole body, embryo E13.CNhs10512.372-23H228.51
whole body, embryo E14.5.CNhs10578.420-27D225.28
whole body, embryo E14.CNhs10519.395-14B124.94
whole body, embryo E16.CNhs10514.453-14F223.72
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G529.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G532.14
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G534.34
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G529.82
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G526.87
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G523.39
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G525.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G524.71
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G524.47
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G528.58
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G532.56
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G522.57
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G524.31
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G534.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G533.26
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G528.75
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G522.41
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G531.69
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G529.64
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G527.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G528.54
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G541.30
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G527.03
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G523.57
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G524.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G525.51
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G534.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G529.28
whole body, embryo E17.5.CNhs10513.490-9F930.48
whole body, embryo E17.CNhs10517.475-3I524.48
whole body, embryo E18.CNhs10516.493-3B329.71
whole body, neonate N00.CNhs10525.657-19C224.50
whole body, neonate N01.CNhs10576.659-23C626.97
whole body, neonate N06.CNhs10515.692-21D126.47
whole body, neonate N10.CNhs10518.761-6B430.37





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
tube1.12e-08114
primary circulatory organ2.53e-0818
heart2.53e-0818
primitive heart tube2.53e-0818
primary heart field2.53e-0818
anterior lateral plate mesoderm2.53e-0818
heart tube2.53e-0818
heart primordium2.53e-0818
cardiac mesoderm2.53e-0818
cardiogenic plate2.53e-0818
heart rudiment2.53e-0818
anatomical conduit3.72e-08122
epithelial tube1.27e-0747
structure with developmental contribution from neural crest3.61e-0792
occipital lobe9.42e-0710
visual cortex9.42e-0710
neocortex9.42e-0710
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