FFCP PHASE1:Mm9::chr9:95538071..95538075,+: Difference between revisions
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{{FFCP|EntrezGene=76477|HGNC=|MCL_coexpression_id=32|UniProt=Q8R4W6|association_with_transcript=24bp_to_NM_029620,uc009rbg.1_5end|description=CAGE_peak_3_at_Pcolce2_5end|id=chr9:95538071..95538075,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000217,2.50e-20,2;CL:0000328,2.50e-20,2;CL:0002573,2.50e-20,2;CL:0002376,2.50e-20,2;CL:0000218,2.50e-20,2;CL:0000692,2.50e-20,2;CL:0002377,2.50e-20,2;CL:0002375,2.50e-20,2;CL:0000215,6.65e-14,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!1.12e-09!14;UBERON:0000117!1.12e-09!14;UBERON:0000171!1.12e-09!14;UBERON:0000170!1.12e-09!14;UBERON:0005597!1.12e-09!14;UBERON:0000118!1.12e-09!14;UBERON:0005153!1.75e-07!17;UBERON:0005178!1.75e-07!17;UBERON:0005181!1.75e-07!17;UBERON:0002224!1.75e-07!17;UBERON:0000915!1.75e-07!17;UBERON:0008947!1.75e-07!17;UBERON:0003258!1.75e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002048,8.18e-12,14;UBERON:0000117,8.18e-12,14;UBERON:0000171,8.18e-12,14;UBERON:0000170,8.18e-12,14;UBERON:0005597,8.18e-12,14;UBERON:0000118,8.18e-12,14;UBERON:0005153,8.59e-10,17;UBERON:0005178,8.59e-10,17;UBERON:0005181,8.59e-10,17;UBERON:0002224,8.59e-10,17;UBERON:0000915,8.59e-10,17;UBERON:0008947,8.59e-10,17;UBERON:0003258,8.59e-10,17;UBERON:0005157,2.26e-08,20|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.219686182734472,0,0.419959264876088,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,1.10115880999389,0,0.614426133024974,0,0,0,1.3959149950069,0,0.15279824777681,0,0,0,1.4387976733305,2.11600368298999,0,0,0,0,0,0,0,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0,0,0,0,0.41557608911912,0,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.243206428637567,0,0.439100230582101,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0.296452627087149,0.333690211432188,0,0.224862112384854,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0.624075346229121,0.252578877947112,0.179397413521912,0,2.77129785249907,0,0,0,0.234690248288502,0,0.714130922658041,0.780534591431195,0.472905432318573,0.8858587585951,0.797273843287435,3.60499292374624,2.41758974612254,3.32692834737477,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.170870880797853,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0,0,0.191288332068843,0,0|short_description=p3@Pcolce2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:76477 | |||
|HGNC= | |||
|MCL_coexpression_id=32 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8R4W6 | |||
|association_with_transcript=24bp_to_NM_029620,uc009rbg.1_5end | |||
|cluster_id=chr9:95538071..95538075,+ | |||
|description=CAGE_peak_3_at_Pcolce2_5end | |||
|id=chr9:95538071..95538075,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000217,2.50e-20,2;CL:0000328,2.50e-20,2;CL:0002573,2.50e-20,2;CL:0002376,2.50e-20,2;CL:0000218,2.50e-20,2;CL:0000692,2.50e-20,2;CL:0002377,2.50e-20,2;CL:0002375,2.50e-20,2;CL:0000215,6.65e-14,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!1.12e-09!14;UBERON:0000117!1.12e-09!14;UBERON:0000171!1.12e-09!14;UBERON:0000170!1.12e-09!14;UBERON:0005597!1.12e-09!14;UBERON:0000118!1.12e-09!14;UBERON:0005153!1.75e-07!17;UBERON:0005178!1.75e-07!17;UBERON:0005181!1.75e-07!17;UBERON:0002224!1.75e-07!17;UBERON:0000915!1.75e-07!17;UBERON:0008947!1.75e-07!17;UBERON:0003258!1.75e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,8.18e-12,14;UBERON:0000117,8.18e-12,14;UBERON:0000171,8.18e-12,14;UBERON:0000170,8.18e-12,14;UBERON:0005597,8.18e-12,14;UBERON:0000118,8.18e-12,14;UBERON:0005153,8.59e-10,17;UBERON:0005178,8.59e-10,17;UBERON:0005181,8.59e-10,17;UBERON:0002224,8.59e-10,17;UBERON:0000915,8.59e-10,17;UBERON:0008947,8.59e-10,17;UBERON:0003258,8.59e-10,17;UBERON:0005157,2.26e-08,20 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.219686182734472,0,0.419959264876088,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,1.10115880999389,0,0.614426133024974,0,0,0,1.3959149950069,0,0.15279824777681,0,0,0,1.4387976733305,2.11600368298999,0,0,0,0,0,0,0,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0,0,0,0,0.41557608911912,0,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.243206428637567,0,0.439100230582101,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0.296452627087149,0.333690211432188,0,0.224862112384854,0,0,0,0.287696137450811,0,0.274561413188081,0,0,0.624075346229121,0.252578877947112,0.179397413521912,0,2.77129785249907,0,0,0,0.234690248288502,0,0.714130922658041,0.780534591431195,0.472905432318573,0.8858587585951,0.797273843287435,3.60499292374624,2.41758974612254,3.32692834737477,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0.170870880797853,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0,0,0.191288332068843,0,0 | |||
|short_description=p3@Pcolce2 | |||
}} |
Revision as of 19:19, 5 August 2015
Short description: | p3@Pcolce2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Pcolce2_5end |
Coexpression cluster: | MCL_coexpression_mm9:32 |
Association with transcript: | 24bp_to_NM_029620, uc009rbg.1_5end |
EntrezGene: | 76477 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insulating cell | 2.50e-20 | 2 |
myelin accumulating cell | 2.50e-20 | 2 |
Schwann cell | 2.50e-20 | 2 |
non-myelinating Schwann cell | 2.50e-20 | 2 |
myelinating Schwann cell;;Schwann cell | 2.50e-20 | 2 |
terminal Schwann cell | 2.50e-20 | 2 |
immature Schwann cell | 2.50e-20 | 2 |
Schwann cell precursor | 2.50e-20 | 2 |
barrier cell | 6.65e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
lung | 8.18e-12 | 14 |
respiratory tube | 8.18e-12 | 14 |
respiration organ | 8.18e-12 | 14 |
pair of lungs | 8.18e-12 | 14 |
lung primordium | 8.18e-12 | 14 |
lung bud | 8.18e-12 | 14 |
epithelial bud | 8.59e-10 | 17 |
thoracic cavity element | 8.59e-10 | 17 |
thoracic segment organ | 8.59e-10 | 17 |
thoracic cavity | 8.59e-10 | 17 |
thoracic segment of trunk | 8.59e-10 | 17 |
respiratory primordium | 8.59e-10 | 17 |
endoderm of foregut | 8.59e-10 | 17 |
epithelial fold | 2.26e-08 | 20 |