FFCP PHASE1:Mm9::chr1:6443899..6443911,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=67|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:6443899..6443911,+|id=chr1:6443899..6443911,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002092,7.91e-15,3;CL:0002540,7.91e-15,3;CL:0002476,3.40e-11,2;CL:0002320,5.73e-09,46;CL:0000134,5.73e-09,46;CL:0002563,1.09e-08,9;CL:0002251,1.09e-08,9;CL:0000034,1.22e-08,97;CL:0000219,2.04e-07,54;CL:0002250,5.92e-07,3;CL:0000557,9.08e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!8.48e-08!48;UBERON:0002390!6.58e-07!45;UBERON:0003061!6.58e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.26e-10,16;UBERON:0002384,5.73e-09,46;UBERON:0003350,1.09e-08,9;UBERON:0004808,1.09e-08,9;UBERON:0001277,1.09e-08,9;UBERON:0001474,2.07e-07,22;UBERON:0004765,2.07e-07,22;UBERON:0001434,2.07e-07,22;UBERON:0000485,3.94e-07,11|phase1_expression=0,0,0,0,0,9.23335995515394,5.37309073369709,0,0,0,0,0.239316476986009,0,0,0,0.202475267389826,0,0,0,0,0,2.78014663362479,3.13439746966722,0,0.45881856213434,0,0,0.646413698057667,0,0,0.443461021310609,0,0,0,1.73310971850765,0.332469290716985,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,3.1496490104849,2.96659908770092,1.4209602298922,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0,0,0.485300549842228,0.441683036920787,0.969750506270444,0,0,0,0.510914110417183,4.43315960671905,0.599902730993408,2.28726408731516,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,1.02939162845886,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0.991256348951394,0,0,0,0,0,0.22237804384487,0,0.474529061544512,0,0,0,0.38992817423824,0,0.648414149624083,0.995706366271836,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0,0,37.6978209848181,23.3879444042045,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0,0,0,0.874442509889552,0,0.170870880797853,0,0.370389054739423,0,0,0.457556346413045,2.37969801991397,2.23922323717853,1.10559979043539,0,0,0,0,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,1.02710957164827,1.03936658382236,0,0.198681354781265,0,0.443068581523732,0.100966449948148,0.15241361331,0,0.292373642219257,0.384847366561318,0.116876902181569,0.226730383615211,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0.128050304809739,0.17230640686684,0.476293691283074,0.231768651889711,0,0,0.294397840268795,0,0,0,0,0.188218760830661,0.25384382367503,0,0,0,0,0,0,0,0,0,0.249810577937946,0.233931608445408,0,0.191288332068843,0,0.231867835620421|short_description=p@chr1:6443899..6443911,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=67 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:6443899..6443911,+ | |||
|description=CAGE_peak_at_chr1:6443899..6443911,+ | |||
|id=chr1:6443899..6443911,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,7.91e-15,3;CL:0002540,7.91e-15,3;CL:0002476,3.40e-11,2;CL:0002320,5.73e-09,46;CL:0000134,5.73e-09,46;CL:0002563,1.09e-08,9;CL:0002251,1.09e-08,9;CL:0000034,1.22e-08,97;CL:0000219,2.04e-07,54;CL:0002250,5.92e-07,3;CL:0000557,9.08e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.48e-08!48;UBERON:0002390!6.58e-07!45;UBERON:0003061!6.58e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.26e-10,16;UBERON:0002384,5.73e-09,46;UBERON:0003350,1.09e-08,9;UBERON:0004808,1.09e-08,9;UBERON:0001277,1.09e-08,9;UBERON:0001474,2.07e-07,22;UBERON:0004765,2.07e-07,22;UBERON:0001434,2.07e-07,22;UBERON:0000485,3.94e-07,11 | |||
|phase1_expression=0,0,0,0,0,9.23335995515394,5.37309073369709,0,0,0,0,0.239316476986009,0,0,0,0.202475267389826,0,0,0,0,0,2.78014663362479,3.13439746966722,0,0.45881856213434,0,0,0.646413698057667,0,0,0.443461021310609,0,0,0,1.73310971850765,0.332469290716985,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,3.1496490104849,2.96659908770092,1.4209602298922,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0,0,0.485300549842228,0.441683036920787,0.969750506270444,0,0,0,0.510914110417183,4.43315960671905,0.599902730993408,2.28726408731516,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,1.02939162845886,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0.991256348951394,0,0,0,0,0,0.22237804384487,0,0.474529061544512,0,0,0,0.38992817423824,0,0.648414149624083,0.995706366271836,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0.157635144106191,0,0,0,0,0,37.6978209848181,23.3879444042045,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0,0,0,0.874442509889552,0,0.170870880797853,0,0.370389054739423,0,0,0.457556346413045,2.37969801991397,2.23922323717853,1.10559979043539,0,0,0,0,0.209088296014469,0.218362563746178,0,0.165306911450672,0,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,1.02710957164827,1.03936658382236,0,0.198681354781265,0,0.443068581523732,0.100966449948148,0.15241361331,0,0.292373642219257,0.384847366561318,0.116876902181569,0.226730383615211,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0.128050304809739,0.17230640686684,0.476293691283074,0.231768651889711,0,0,0.294397840268795,0,0,0,0,0.188218760830661,0.25384382367503,0,0,0,0,0,0,0,0,0,0.249810577937946,0.233931608445408,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr1:6443899..6443911,+ | |||
}} |
Latest revision as of 20:58, 5 August 2015
Short description: | p@chr1:6443899..6443911, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:6443899..6443911, + |
Coexpression cluster: | MCL_coexpression_mm9:67 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 7.91e-15 | 3 |
mesenchymal stem cell of the bone marrow | 7.91e-15 | 3 |
bone marrow macrophage | 3.40e-11 | 2 |
connective tissue cell | 5.73e-09 | 46 |
mesenchymal cell | 5.73e-09 | 46 |
intestinal epithelial cell | 1.09e-08 | 9 |
epithelial cell of alimentary canal | 1.09e-08 | 9 |
stem cell | 1.22e-08 | 97 |
motile cell | 2.04e-07 | 54 |
intestinal crypt stem cell | 5.92e-07 | 3 |
granulocyte monocyte progenitor cell | 9.08e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.26e-10 | 16 |
connective tissue | 5.73e-09 | 46 |
epithelium of mucosa | 1.09e-08 | 9 |
gastrointestinal system epithelium | 1.09e-08 | 9 |
intestinal epithelium | 1.09e-08 | 9 |
bone element | 2.07e-07 | 22 |
skeletal element | 2.07e-07 | 22 |
skeletal system | 2.07e-07 | 22 |
simple columnar epithelium | 3.94e-07 | 11 |