FFCP PHASE1:Mm9::chr6:52154238..52154249,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=579 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:52154238..52154249,- | |||
|description=CAGE_peak_at_chr6:52154238..52154249,- | |description=CAGE_peak_at_chr6:52154238..52154249,- | ||
|id=chr6:52154238..52154249,- | |id=chr6:52154238..52154249,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,2.62e-11,9;CL:0000213,3.20e-07,1;CL:0002078,3.20e-07,1;CL:0000115,3.20e-07,1;CL:0002262,3.20e-07,1;CL:1000398,3.20e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005157!5.00e-11!27;UBERON:0002048!4.99e-08!14;UBERON:0000117!4.99e-08!14;UBERON:0000171!4.99e-08!14;UBERON:0000170!4.99e-08!14;UBERON:0005597!4.99e-08!14;UBERON:0000118!4.99e-08!14;UBERON:0005153!4.84e-07!17;UBERON:0005178!5.65e-07!17;UBERON:0005181!5.65e-07!17;UBERON:0002224!5.65e-07!17;UBERON:0000915!5.65e-07!17;UBERON:0008947!5.65e-07!17;UBERON:0003258!5.65e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010313,1.96e-19,3;UBERON:0002342,1.96e-19,3;UBERON:0002005,1.96e-19,3;UBERON:0005428,1.96e-19,3;UBERON:0005062,1.96e-19,3;UBERON:0001896,9.57e-13,2;UBERON:0002298,9.57e-13,2;UBERON:0005290,9.57e-13,2;UBERON:0010096,9.57e-13,2;UBERON:0002410,2.62e-11,9;UBERON:0005157,1.66e-10,20;UBERON:0000010,2.76e-09,11;UBERON:0002394,3.20e-07,1;UBERON:0001281,3.20e-07,1;UBERON:0000353,3.20e-07,1;UBERON:0003497,3.20e-07,1;UBERON:0003909,3.20e-07,1;UBERON:0003928,3.20e-07,1;UBERON:0003835,3.20e-07,1;UBERON:0003513,3.20e-07,1;UBERON:0001280,3.20e-07,1;UBERON:0004647,3.20e-07,1;UBERON:0002294,3.20e-07,1;UBERON:0001173,3.20e-07,1;UBERON:0004912,3.20e-07,1;UBERON:0005171,3.20e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.405507724878058,0.917733760808408,0,0,0,0,0,2.87505128729943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.593768556259299,0,0.304465478312141,0,0.150722640552623,0.705532242814229,0.125666591329675,0,2.89198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0.330418782983798,0.264450566663544,0.426576501070468,0.464473343720877,0.77320476793256,1.00841762311671,0.889512175379481,1.14135375667535,0,0.329397909448022,0.502670417600539,0.596869416123452,0.974820435595601,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0.295220295959204,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.554259570499814,1.32643988239339,0.488894929326078,0.848725428875941,0.234690248288502,0.335012514883631,1.42826184531608,0,0.315270288212382,0.664394068946325,1.2756381492599,0,0.172684981865896,0.578596234326046,0,0,0,0.275936746304732,1.60550589987792,1.40654023910644,0.655739781506702,0,7.57219726599016,8.19921363022941,12.2791336707695,0,0,0,0.404810701674894,0.584511715822624,1.97643888973262,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484393280087717,0.120625849856312,0,0.164140899745061,0.291480836629851,0.556275906031529,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0.276399947608848,0,0.316335993581135,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.798049746802062,0.512200817262403,0.243106717068294,1.04806581313991,0.367687016900028,0.44449345560323,0.206035057238894,0,0.505394423527595,0.50695859978048,0.565879024158229,0.280924522409647,0.0640251524048693,0.17230640686684,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0.953744759789284,0.145346416632329,0.564656282491984,0,0,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.0985044823755635,0.409231043169689,0.154936841185966,0.578719832943424,0.249810577937946,0,0.214871054048298,0.765153328275374,0.441182838239031,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.405507724878058,0.917733760808408,0,0,0,0,0,2.87505128729943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0.593768556259299,0,0.304465478312141,0,0.150722640552623,0.705532242814229,0.125666591329675,0,2.89198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0.330418782983798,0.264450566663544,0.426576501070468,0.464473343720877,0.77320476793256,1.00841762311671,0.889512175379481,1.14135375667535,0,0.329397909448022,0.502670417600539,0.596869416123452,0.974820435595601,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0.295220295959204,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.554259570499814,1.32643988239339,0.488894929326078,0.848725428875941,0.234690248288502,0.335012514883631,1.42826184531608,0,0.315270288212382,0.664394068946325,1.2756381492599,0,0.172684981865896,0.578596234326046,0,0,0,0.275936746304732,1.60550589987792,1.40654023910644,0.655739781506702,0,7.57219726599016,8.19921363022941,12.2791336707695,0,0,0,0.404810701674894,0.584511715822624,1.97643888973262,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484393280087717,0.120625849856312,0,0.164140899745061,0.291480836629851,0.556275906031529,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0.276399947608848,0,0.316335993581135,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518936737920883,0.798049746802062,0.512200817262403,0.243106717068294,1.04806581313991,0.367687016900028,0.44449345560323,0.206035057238894,0,0.505394423527595,0.50695859978048,0.565879024158229,0.280924522409647,0.0640251524048693,0.17230640686684,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0.953744759789284,0.145346416632329,0.564656282491984,0,0,0.263069711437843,0.135804113845862,0.561142271657738,0.237270036248348,0.0985044823755635,0.409231043169689,0.154936841185966,0.578719832943424,0.249810577937946,0,0.214871054048298,0.765153328275374,0.441182838239031,0.463735671240843 | ||
|short_description=p@chr6:52154238..52154249,- | |short_description=p@chr6:52154238..52154249,- | ||
}} | }} |
Latest revision as of 22:31, 5 August 2015
Short description: | p@chr6:52154238..52154249, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:52154238..52154249, - |
Coexpression cluster: | MCL_coexpression_mm9:579 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 2.62e-11 | 9 |
lining cell | 3.20e-07 | 1 |
meso-epithelial cell | 3.20e-07 | 1 |
endothelial cell | 3.20e-07 | 1 |
endothelial cell of sinusoid | 3.20e-07 | 1 |
endothelial cell of hepatic sinusoid | 3.20e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
neural crest-derived structure | 1.96e-19 | 3 |
neural crest | 1.96e-19 | 3 |
enteric nervous system | 1.96e-19 | 3 |
vagal neural crest | 1.96e-19 | 3 |
neural fold | 1.96e-19 | 3 |
medulla oblongata | 9.57e-13 | 2 |
brainstem | 9.57e-13 | 2 |
myelencephalon | 9.57e-13 | 2 |
future myelencephalon | 9.57e-13 | 2 |
autonomic nervous system | 2.62e-11 | 9 |
epithelial fold | 1.66e-10 | 20 |
peripheral nervous system | 2.76e-09 | 11 |
bile duct | 3.20e-07 | 1 |
hepatic sinusoid | 3.20e-07 | 1 |
parenchyma | 3.20e-07 | 1 |
abdomen blood vessel | 3.20e-07 | 1 |
sinusoid | 3.20e-07 | 1 |
digestive system duct | 3.20e-07 | 1 |
abdominal segment blood vessel | 3.20e-07 | 1 |
trunk blood vessel | 3.20e-07 | 1 |
liver parenchyma | 3.20e-07 | 1 |
liver lobule | 3.20e-07 | 1 |
biliary system | 3.20e-07 | 1 |
biliary tree | 3.20e-07 | 1 |
biliary bud | 3.20e-07 | 1 |
hepatic duct | 3.20e-07 | 1 |