FFCP PHASE1:Mm9::chr8:11477004..11477016,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=137 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:11477004..11477016,+ | |||
|description=CAGE_peak_at_chr8:11477004..11477016,+ | |||
|id=chr8:11477004..11477016,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,2.01e-10,1;CL:0002078,2.01e-10,1;CL:0000115,2.01e-10,1;CL:0002262,2.01e-10,1;CL:1000398,2.01e-10,1;CL:0000057,3.04e-10,1;CL:0000632,3.04e-10,1;CL:0000625,1.03e-09,1;CL:0000355,2.49e-09,9;CL:0000182,5.54e-08,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.28e-26,3;DOID:4045,1.28e-26,3;DOID:0050686,1.11e-13,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.01e-10,1;UBERON:0001281,2.01e-10,1;UBERON:0000353,2.01e-10,1;UBERON:0003497,2.01e-10,1;UBERON:0003909,2.01e-10,1;UBERON:0003928,2.01e-10,1;UBERON:0003835,2.01e-10,1;UBERON:0003513,2.01e-10,1;UBERON:0001280,2.01e-10,1;UBERON:0004647,2.01e-10,1;UBERON:0002294,2.01e-10,1;UBERON:0001173,2.01e-10,1;UBERON:0004912,2.01e-10,1;UBERON:0005171,2.01e-10,1;UBERON:0001134,2.49e-09,9;UBERON:0002036,2.49e-09,9;UBERON:0002385,2.49e-09,9;UBERON:0000486,2.49e-09,9;UBERON:0007503,2.49e-09,9;UBERON:0001015,2.49e-09,9;UBERON:0002329,2.49e-09,9;UBERON:0003082,2.49e-09,9;UBERON:0003059,2.49e-09,9;UBERON:0007282,2.49e-09,9;UBERON:0004290,2.49e-09,9;UBERON:0009618,2.49e-09,9;UBERON:0000383,1.86e-08,10;UBERON:0007524,9.72e-08,11;UBERON:0003077,9.72e-08,11;UBERON:0007285,9.72e-08,11;UBERON:0005256,6.77e-07,45 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0.454999239389536,0.30246421130683,0,0.16787927191189,0.233612640595526,0,0.422366166455,0.234064526321993,0,0,0,0,0,0,0,0,0,0.42438965179803,0,0,0,0,0,0.57423196411502,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,3.76678467663217,2.3440060335714,4.18818995179039,25.8821854733646,8.87959130445979,3.88408282424923,0,0,0,0.782391344348039,0,0,0.194429899074283,0,0,0,0,1.00828139742739,0,0,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,14.2033599463822,5.16254326188832,2.03991400112325,0.539703191637817,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0.461230994512117,0,0,0.251333182659351,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0,0,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0.350296027101508,0,0,0.0810688095458557,0.438599962275997,0,0.402619256281115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509935289981566,0.279902904647316,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0.201932899896295,0,0,0,0,0,0,0,0,0,0.579568782096571,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.320297694209588,0.348975407639361,0.454999239389536,0.30246421130683,0,0.16787927191189,0.233612640595526,0,0.422366166455,0.234064526321993,0,0,0,0,0,0,0,0,0,0.42438965179803,0,0,0,0,0,0.57423196411502,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,3.76678467663217,2.3440060335714,4.18818995179039,25.8821854733646,8.87959130445979,3.88408282424923,0,0,0,0.782391344348039,0,0,0.194429899074283,0,0,0,0,1.00828139742739,0,0,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,14.2033599463822,5.16254326188832,2.03991400112325,0.539703191637817,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0.461230994512117,0,0,0.251333182659351,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0,0,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0.350296027101508,0,0,0.0810688095458557,0.438599962275997,0,0.402619256281115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509935289981566,0.279902904647316,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0.201932899896295,0,0,0,0,0,0,0,0,0,0.579568782096571,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:11477004..11477016,+ | |||
}} | }} |
Latest revision as of 23:09, 5 August 2015
Short description: | p@chr8:11477004..11477016, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:11477004..11477016, + |
Coexpression cluster: | MCL_coexpression_mm9:137 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 2.01e-10 | 1 |
meso-epithelial cell | 2.01e-10 | 1 |
endothelial cell | 2.01e-10 | 1 |
endothelial cell of sinusoid | 2.01e-10 | 1 |
endothelial cell of hepatic sinusoid | 2.01e-10 | 1 |
fibroblast | 3.04e-10 | 1 |
hepatic stellate cell | 3.04e-10 | 1 |
CD8-positive, alpha-beta T cell | 1.03e-09 | 1 |
multi-potent skeletal muscle stem cell | 2.49e-09 | 9 |
hepatocyte | 5.54e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
bile duct | 2.01e-10 | 1 |
hepatic sinusoid | 2.01e-10 | 1 |
parenchyma | 2.01e-10 | 1 |
abdomen blood vessel | 2.01e-10 | 1 |
sinusoid | 2.01e-10 | 1 |
digestive system duct | 2.01e-10 | 1 |
abdominal segment blood vessel | 2.01e-10 | 1 |
trunk blood vessel | 2.01e-10 | 1 |
liver parenchyma | 2.01e-10 | 1 |
liver lobule | 2.01e-10 | 1 |
biliary system | 2.01e-10 | 1 |
biliary tree | 2.01e-10 | 1 |
biliary bud | 2.01e-10 | 1 |
hepatic duct | 2.01e-10 | 1 |
skeletal muscle tissue | 2.49e-09 | 9 |
striated muscle tissue | 2.49e-09 | 9 |
muscle tissue | 2.49e-09 | 9 |
multilaminar epithelium | 2.49e-09 | 9 |
epithelial vesicle | 2.49e-09 | 9 |
musculature | 2.49e-09 | 9 |
somite | 2.49e-09 | 9 |
myotome | 2.49e-09 | 9 |
presomitic mesoderm | 2.49e-09 | 9 |
presumptive segmental plate | 2.49e-09 | 9 |
dermomyotome | 2.49e-09 | 9 |
trunk paraxial mesoderm | 2.49e-09 | 9 |
musculature of body | 1.86e-08 | 10 |
dense mesenchyme tissue | 9.72e-08 | 11 |
paraxial mesoderm | 9.72e-08 | 11 |
presumptive paraxial mesoderm | 9.72e-08 | 11 |
trunk mesenchyme | 6.77e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.28e-26 | 3 |
muscle cancer | 1.28e-26 | 3 |
organ system cancer | 1.11e-13 | 6 |