FFCP PHASE1:Mm9::chr8:11477018..11477030,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=137|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:11477018..11477030,+|id=chr8:11477018..11477030,+|ontology_enrichment_celltype=CL:0000144!1.13e-09!121;CL:0000012!1.13e-09!121;CL:0000063!2.33e-08!66;CL:0000034!9.87e-08!97;CL:0002371!1.44e-07!118;CL:0002320!5.42e-07!46;CL:0000134!5.42e-07!46;CL:0000219!5.56e-07!54|ontology_enrichment_celltype_v019_2=CL:0000355,7.22e-16,9;CL:0000213,2.01e-10,1;CL:0002078,2.01e-10,1;CL:0000115,2.01e-10,1;CL:0002262,2.01e-10,1;CL:1000398,2.01e-10,1;CL:0000057,6.88e-10,1;CL:0000632,6.88e-10,1|ontology_enrichment_disease=DOID:0060100!4.45e-07!3;DOID:4045!4.45e-07!3|ontology_enrichment_disease_v019_2=DOID:0060100,5.70e-27,3;DOID:4045,5.70e-27,3;DOID:0050686,7.46e-14,6|ontology_enrichment_uberon=UBERON:0002384!5.42e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0001134,7.22e-16,9;UBERON:0002036,7.22e-16,9;UBERON:0002385,7.22e-16,9;UBERON:0000486,7.22e-16,9;UBERON:0007503,7.22e-16,9;UBERON:0001015,7.22e-16,9;UBERON:0002329,7.22e-16,9;UBERON:0003082,7.22e-16,9;UBERON:0003059,7.22e-16,9;UBERON:0007282,7.22e-16,9;UBERON:0004290,7.22e-16,9;UBERON:0009618,7.22e-16,9;UBERON:0000383,2.54e-14,10;UBERON:0007524,4.68e-13,11;UBERON:0003077,4.68e-13,11;UBERON:0007285,4.68e-13,11;UBERON:0002394,2.01e-10,1;UBERON:0001281,2.01e-10,1;UBERON:0000353,2.01e-10,1;UBERON:0003497,2.01e-10,1;UBERON:0003909,2.01e-10,1;UBERON:0003928,2.01e-10,1;UBERON:0003835,2.01e-10,1;UBERON:0003513,2.01e-10,1;UBERON:0001280,2.01e-10,1;UBERON:0004647,2.01e-10,1;UBERON:0002294,2.01e-10,1;UBERON:0001173,2.01e-10,1;UBERON:0004912,2.01e-10,1;UBERON:0005171,2.01e-10,1;UBERON:0005256,6.77e-07,45;UBERON:0002204,7.32e-07,32|phase1_expression=0,0,0,0,0,0.33575854382378,0.233612640595526,0.129123323441576,0.563154888606667,0.234064526321993,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0.288851619751275,0,0,5.4409111995798,5.4693474116666,2.61761871986899,23.5292595212406,13.6609096991689,4.85510353031154,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,1.54701627683233,0,0,0,0.338844532069132,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.226714680320357,18.5513272769074,2.58127163094416,0,0,0,0,0,0.170430322578058,0.259786004602869,0,0.14084341977668,0,0,0,0.216491041011214,0,0.505524445014783,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,1.13665399758237,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.292399974850665,0.439100230582101,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509935289981566,0.559805809294632,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr8:11477018..11477030,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=137 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:11477018..11477030,+ | |||
|description=CAGE_peak_at_chr8:11477018..11477030,+ | |||
|id=chr8:11477018..11477030,+ | |||
|ontology_enrichment_celltype=CL:0000144!1.13e-09!121;CL:0000012!1.13e-09!121;CL:0000063!2.33e-08!66;CL:0000034!9.87e-08!97;CL:0002371!1.44e-07!118;CL:0002320!5.42e-07!46;CL:0000134!5.42e-07!46;CL:0000219!5.56e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,7.22e-16,9;CL:0000213,2.01e-10,1;CL:0002078,2.01e-10,1;CL:0000115,2.01e-10,1;CL:0002262,2.01e-10,1;CL:1000398,2.01e-10,1;CL:0000057,6.88e-10,1;CL:0000632,6.88e-10,1 | |||
|ontology_enrichment_disease=DOID:0060100!4.45e-07!3;DOID:4045!4.45e-07!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.70e-27,3;DOID:4045,5.70e-27,3;DOID:0050686,7.46e-14,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!5.42e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,7.22e-16,9;UBERON:0002036,7.22e-16,9;UBERON:0002385,7.22e-16,9;UBERON:0000486,7.22e-16,9;UBERON:0007503,7.22e-16,9;UBERON:0001015,7.22e-16,9;UBERON:0002329,7.22e-16,9;UBERON:0003082,7.22e-16,9;UBERON:0003059,7.22e-16,9;UBERON:0007282,7.22e-16,9;UBERON:0004290,7.22e-16,9;UBERON:0009618,7.22e-16,9;UBERON:0000383,2.54e-14,10;UBERON:0007524,4.68e-13,11;UBERON:0003077,4.68e-13,11;UBERON:0007285,4.68e-13,11;UBERON:0002394,2.01e-10,1;UBERON:0001281,2.01e-10,1;UBERON:0000353,2.01e-10,1;UBERON:0003497,2.01e-10,1;UBERON:0003909,2.01e-10,1;UBERON:0003928,2.01e-10,1;UBERON:0003835,2.01e-10,1;UBERON:0003513,2.01e-10,1;UBERON:0001280,2.01e-10,1;UBERON:0004647,2.01e-10,1;UBERON:0002294,2.01e-10,1;UBERON:0001173,2.01e-10,1;UBERON:0004912,2.01e-10,1;UBERON:0005171,2.01e-10,1;UBERON:0005256,6.77e-07,45;UBERON:0002204,7.32e-07,32 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0.233612640595526,0.129123323441576,0.563154888606667,0.234064526321993,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0.288851619751275,0,0,5.4409111995798,5.4693474116666,2.61761871986899,23.5292595212406,13.6609096991689,4.85510353031154,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,1.54701627683233,0,0,0,0.338844532069132,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.226714680320357,18.5513272769074,2.58127163094416,0,0,0,0,0,0.170430322578058,0.259786004602869,0,0.14084341977668,0,0,0,0.216491041011214,0,0.505524445014783,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,1.13665399758237,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.292399974850665,0.439100230582101,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509935289981566,0.559805809294632,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:11477018..11477030,+ | |||
}} |
Latest revision as of 23:09, 5 August 2015
Short description: | p@chr8:11477018..11477030, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:11477018..11477030, + |
Coexpression cluster: | MCL_coexpression_mm9:137 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 7.22e-16 | 9 |
lining cell | 2.01e-10 | 1 |
meso-epithelial cell | 2.01e-10 | 1 |
endothelial cell | 2.01e-10 | 1 |
endothelial cell of sinusoid | 2.01e-10 | 1 |
endothelial cell of hepatic sinusoid | 2.01e-10 | 1 |
fibroblast | 6.88e-10 | 1 |
hepatic stellate cell | 6.88e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 7.22e-16 | 9 |
striated muscle tissue | 7.22e-16 | 9 |
muscle tissue | 7.22e-16 | 9 |
multilaminar epithelium | 7.22e-16 | 9 |
epithelial vesicle | 7.22e-16 | 9 |
musculature | 7.22e-16 | 9 |
somite | 7.22e-16 | 9 |
myotome | 7.22e-16 | 9 |
presomitic mesoderm | 7.22e-16 | 9 |
presumptive segmental plate | 7.22e-16 | 9 |
dermomyotome | 7.22e-16 | 9 |
trunk paraxial mesoderm | 7.22e-16 | 9 |
musculature of body | 2.54e-14 | 10 |
dense mesenchyme tissue | 4.68e-13 | 11 |
paraxial mesoderm | 4.68e-13 | 11 |
presumptive paraxial mesoderm | 4.68e-13 | 11 |
bile duct | 2.01e-10 | 1 |
hepatic sinusoid | 2.01e-10 | 1 |
parenchyma | 2.01e-10 | 1 |
abdomen blood vessel | 2.01e-10 | 1 |
sinusoid | 2.01e-10 | 1 |
digestive system duct | 2.01e-10 | 1 |
abdominal segment blood vessel | 2.01e-10 | 1 |
trunk blood vessel | 2.01e-10 | 1 |
liver parenchyma | 2.01e-10 | 1 |
liver lobule | 2.01e-10 | 1 |
biliary system | 2.01e-10 | 1 |
biliary tree | 2.01e-10 | 1 |
biliary bud | 2.01e-10 | 1 |
hepatic duct | 2.01e-10 | 1 |
trunk mesenchyme | 6.77e-07 | 45 |
musculoskeletal system | 7.32e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.70e-27 | 3 |
muscle cancer | 5.70e-27 | 3 |
organ system cancer | 7.46e-14 | 6 |