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FFCP PHASE1:Mm9::chr13:41454359..41454375,-: Difference between revisions

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{{FFCP|EntrezGene=18003|HGNC=|UniProt=O35177|association_with_transcript=0bp_to_ENSMUST00000163623,NM_017464,uc007qfd.2_5end|description=CAGE_peak_1_at_Nedd9_5end|id=chr13:41454359..41454375,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!3.04e-10!17;UBERON:0005181!3.04e-10!17;UBERON:0002224!3.04e-10!17;UBERON:0000915!3.04e-10!17;UBERON:0008947!3.04e-10!17;UBERON:0003258!3.04e-10!17;UBERON:0002048!1.16e-09!14;UBERON:0000117!1.16e-09!14;UBERON:0000171!1.16e-09!14;UBERON:0000170!1.16e-09!14;UBERON:0005597!1.16e-09!14;UBERON:0000118!1.16e-09!14;UBERON:0005153!3.94e-08!17;UBERON:0005157!2.16e-07!27;UBERON:0000160!6.69e-07!43;UBERON:0000010!9.21e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0005178,3.04e-10,17;UBERON:0005181,3.04e-10,17;UBERON:0002224,3.04e-10,17;UBERON:0000915,3.04e-10,17;UBERON:0008947,3.04e-10,17;UBERON:0003258,3.04e-10,17;UBERON:0005157,5.43e-10,20;UBERON:0002048,1.16e-09,14;UBERON:0000117,1.16e-09,14;UBERON:0000171,1.16e-09,14;UBERON:0000170,1.16e-09,14;UBERON:0005597,1.16e-09,14;UBERON:0000118,1.16e-09,14;UBERON:0000160,3.31e-09,31;UBERON:0005153,3.94e-08,17;UBERON:0005409,8.97e-07,47;UBERON:0000010,9.21e-07,11|phase1_expression=11.3705681444404,58.6278684834127,62.789895035756,58.678056993525,62.6119662432934,42.1376972498843,36.2099592923065,17.4316486646128,74.0548678517767,57.1117444225664,8.73211637950075,8.85470964848234,3.25281386869291,5.07038334030185,1.99865857089398,0.404950534779652,0,8.04428521663506,6.99283611389268,6.36584477697045,26.4484632369827,2.6808556824239,2.61199789138935,46.7177874556748,38.5407592192846,35.6023817751313,42.6454376197484,43.5251890025496,33.8241686632346,34.2760976473506,15.5211357458713,0,0,0,27.7297554961224,19.4494535069436,23.6836453264348,1.67412652294763,0.7813353445238,2.09409497589519,1.17646297606203,2.04913645487534,1.94204141212461,25.4311572310666,26.0538713234152,17.4369414553597,3.12956537739216,41.2067545559044,45.6947260087701,65.3284460889592,20.0180582924268,38.8131923785423,33.724303817605,16.6833292662609,6.38578218370682,65.8584156252024,73.9256275041992,103.650090547766,6.67644320836673,6.87688273053643,8.87363964908651,9.14880236586657,8.00365316500025,1.7997994345628,1.97773272513395,0,5.39280198933128,11.9107674649682,15.0349937847293,11.6105106965254,14.0917724105426,10.5690864229407,11.9269012113871,10.779190330916,14.6643570657902,10.1114066527102,6.60695285996332,6.2566795661742,7.37311359629969,6.72620067423989,7.68496206260241,5.73004707612436,4.74611098302348,7.87867654044352,7.79271063661732,10.606629077052,11.5321061447273,8.57437450796383,53.3869662998948,31.5889121246363,43.4796733052517,5.16254326188832,6.11974200336975,1.61910957491345,6.49776417447669,1.79210754838934,12.7804422319894,27.4392819350673,12.9893002301434,18.0203183000274,21.5490432258321,61.5967091588726,25.4805239706646,0,35.2880396848279,35.7237410319889,37.408808931094,19.8679950711164,25.8937883647172,14.8442139064825,9.02123699183906,13.3964810457342,17.2961622942044,19.7446659123936,27.5157574697549,18.2216557428029,77.6192198685934,29.2090700978222,9.73071607144862,28.470965590744,17.6673214768315,15.0311328471919,54.0536107532554,8.49064311333487,4.81727425670947,40.1067576677488,5.03223522924865,3.59941638596045,5.20987930999565,8.83764772488454,6.40500843946077,27.8952661690559,5.38855392596057,2.30143911597297,7.48036960414416,7.78758062725237,21.1825876808658,25.0058010926287,34.6230179054134,27.3574412652416,27.1951725792051,17.4725599369439,25.0286360429435,21.2493793148358,21.4995337318196,17.1672385181699,16.6789069716317,13.9699820199068,7.54487975264948,17.9650776159428,25.3369618796086,22.1387689751851,37.8144258946813,37.611233984394,39.5101701903251,17.3159812132089,2.80885274925294,4.88961023517959,7.95657798307659,18.4341937556597,22.9835538781474,17.6460820231795,24.1479630296914,20.8570085652248,19.7461904495844,23.2533944750408,26.0225199357631,27.556620798652,26.8232555358973,25.1176220041016,26.3473631024031,31.2867973090211,25.906913604344,27.6465222646366,7.99101804543684,18.4199256158919,60.1362185030512,33.8496725329337,19.8358072997768,26.7072172639504,38.0159010900175,47.1939447618621,40.9175600674561,48.1270834064775,36.5387377389274,41.6688355451748,33.6789179792361,47.7495532898762,37.4331047268711,29.6610404855893,51.0085797704278,56.7552628774947,13.4664209676688,16.3375373031912,39.4477074855781,20.9760867680674,20.1710586654331,29.947995093166,51.5377777562697,56.2394663802284,51.0245865484468,51.2098230275472,2.37162101669719,3.33690211432188,2.55526693647164,1.34917267430912,3.04290182082754,5.30589751455317,10.9489116266011,21.0018180339092,11.0251954207024,10.7078951143352,8.62609239164127,14.5134969590716,12.4815069245824,6.56705082662491,7.17589654087649,6.75420929908714,84.6169610963049,33.9189627069168,64.5341306710422,52.6209765903083,58.437871823837,111.894179971133,99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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:18003
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:O35177
|association_with_transcript=0bp_to_ENSMUST00000163623,NM_017464,uc007qfd.2_5end
|cluster_id=chr13:41454359..41454375,-
|description=CAGE_peak_1_at_Nedd9_5end
|id=chr13:41454359..41454375,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005178!3.04e-10!17;UBERON:0005181!3.04e-10!17;UBERON:0002224!3.04e-10!17;UBERON:0000915!3.04e-10!17;UBERON:0008947!3.04e-10!17;UBERON:0003258!3.04e-10!17;UBERON:0002048!1.16e-09!14;UBERON:0000117!1.16e-09!14;UBERON:0000171!1.16e-09!14;UBERON:0000170!1.16e-09!14;UBERON:0005597!1.16e-09!14;UBERON:0000118!1.16e-09!14;UBERON:0005153!3.94e-08!17;UBERON:0005157!2.16e-07!27;UBERON:0000160!6.69e-07!43;UBERON:0000010!9.21e-07!11
|ontology_enrichment_uberon_v019_2=UBERON:0005178,3.04e-10,17;UBERON:0005181,3.04e-10,17;UBERON:0002224,3.04e-10,17;UBERON:0000915,3.04e-10,17;UBERON:0008947,3.04e-10,17;UBERON:0003258,3.04e-10,17;UBERON:0005157,5.43e-10,20;UBERON:0002048,1.16e-09,14;UBERON:0000117,1.16e-09,14;UBERON:0000171,1.16e-09,14;UBERON:0000170,1.16e-09,14;UBERON:0005597,1.16e-09,14;UBERON:0000118,1.16e-09,14;UBERON:0000160,3.31e-09,31;UBERON:0005153,3.94e-08,17;UBERON:0005409,8.97e-07,47;UBERON:0000010,9.21e-07,11
|phase1_expression=11.3705681444404,58.6278684834127,62.789895035756,58.678056993525,62.6119662432934,42.1376972498843,36.2099592923065,17.4316486646128,74.0548678517767,57.1117444225664,8.73211637950075,8.85470964848234,3.25281386869291,5.07038334030185,1.99865857089398,0.404950534779652,0,8.04428521663506,6.99283611389268,6.36584477697045,26.4484632369827,2.6808556824239,2.61199789138935,46.7177874556748,38.5407592192846,35.6023817751313,42.6454376197484,43.5251890025496,33.8241686632346,34.2760976473506,15.5211357458713,0,0,0,27.7297554961224,19.4494535069436,23.6836453264348,1.67412652294763,0.7813353445238,2.09409497589519,1.17646297606203,2.04913645487534,1.94204141212461,25.4311572310666,26.0538713234152,17.4369414553597,3.12956537739216,41.2067545559044,45.6947260087701,65.3284460889592,20.0180582924268,38.8131923785423,33.724303817605,16.6833292662609,6.38578218370682,65.8584156252024,73.9256275041992,103.650090547766,6.67644320836673,6.87688273053643,8.87363964908651,9.14880236586657,8.00365316500025,1.7997994345628,1.97773272513395,0,5.39280198933128,11.9107674649682,15.0349937847293,11.6105106965254,14.0917724105426,10.5690864229407,11.9269012113871,10.779190330916,14.6643570657902,10.1114066527102,6.60695285996332,6.2566795661742,7.37311359629969,6.72620067423989,7.68496206260241,5.73004707612436,4.74611098302348,7.87867654044352,7.79271063661732,10.606629077052,11.5321061447273,8.57437450796383,53.3869662998948,31.5889121246363,43.4796733052517,5.16254326188832,6.11974200336975,1.61910957491345,6.49776417447669,1.79210754838934,12.7804422319894,27.4392819350673,12.9893002301434,18.0203183000274,21.5490432258321,61.5967091588726,25.4805239706646,0,35.2880396848279,35.7237410319889,37.408808931094,19.8679950711164,25.8937883647172,14.8442139064825,9.02123699183906,13.3964810457342,17.2961622942044,19.7446659123936,27.5157574697549,18.2216557428029,77.6192198685934,29.2090700978222,9.73071607144862,28.470965590744,17.6673214768315,15.0311328471919,54.0536107532554,8.49064311333487,4.81727425670947,40.1067576677488,5.03223522924865,3.59941638596045,5.20987930999565,8.83764772488454,6.40500843946077,27.8952661690559,5.38855392596057,2.30143911597297,7.48036960414416,7.78758062725237,21.1825876808658,25.0058010926287,34.6230179054134,27.3574412652416,27.1951725792051,17.4725599369439,25.0286360429435,21.2493793148358,21.4995337318196,17.1672385181699,16.6789069716317,13.9699820199068,7.54487975264948,17.9650776159428,25.3369618796086,22.1387689751851,37.8144258946813,37.611233984394,39.5101701903251,17.3159812132089,2.80885274925294,4.88961023517959,7.95657798307659,18.4341937556597,22.9835538781474,17.6460820231795,24.1479630296914,20.8570085652248,19.7461904495844,23.2533944750408,26.0225199357631,27.556620798652,26.8232555358973,25.1176220041016,26.3473631024031,31.2867973090211,25.906913604344,27.6465222646366,7.99101804543684,18.4199256158919,60.1362185030512,33.8496725329337,19.8358072997768,26.7072172639504,38.0159010900175,47.1939447618621,40.9175600674561,48.1270834064775,36.5387377389274,41.6688355451748,33.6789179792361,47.7495532898762,37.4331047268711,29.6610404855893,51.0085797704278,56.7552628774947,13.4664209676688,16.3375373031912,39.4477074855781,20.9760867680674,20.1710586654331,29.947995093166,51.5377777562697,56.2394663802284,51.0245865484468,51.2098230275472,2.37162101669719,3.33690211432188,2.55526693647164,1.34917267430912,3.04290182082754,5.30589751455317,10.9489116266011,21.0018180339092,11.0251954207024,10.7078951143352,8.62609239164127,14.5134969590716,12.4815069245824,6.56705082662491,7.17589654087649,6.75420929908714,84.6169610963049,33.9189627069168,64.5341306710422,52.6209765903083,58.437871823837,111.894179971133,99.5022418903537,114.34831764467,110.817506306652,165.434123167635,153.55494221716,80.4568875254274,112.935978140296,96.6255711324497,0,0,26.0635064700089,27.3177378841685,14.9312048688647,12.6588621519579,20.6558031174611,15.1482556322624,83.609678145308,86.2869624895571,86.815629286318,72.6465145775758,56.8136618910105,47.273780641735,72.4611155998061,52.8983102819475,57.7120155801924,6.42642632843614,29.2396575529033,13.3549202750441,20.5237568785506,24.9104885688529,10.619611067197,10.1967867185092,13.6045600634138,19.2377181351016,15.651000322681,32.8955608300002,25.3259727304857,20.3578888507403,24.241821730161,18.0140952023415,15.8127912862498,14.4389760547462,3.06395645178409,9.00305470156551,4.2688365648309,7.71613326113732,6.0295679438373,8.02659679209317,7.24015690649332,9.74287837166718,41.0675489111493,30.0801540626625,2.20528398054962,19.6214641000361,28.5792035251753,48.9740950416626,32.8273946008625,34.962011645698,55.3813589596716,19.4696567111035,7.51831875510552,9.08102219038179,10.926477114813,6.78126445216888,7.38148829693536,8.69357058184786,23.2870449091582,19.1733489683411,25.428795180014,29.5947891584685,14.3932877079417,25.4149333908561,21.0610414602512,18.1906817532588,17.0322799722019,30.8839353221239,35.3756790504438,32.4577368060197,56.1232834353463,69.5900030657357,2.81846469342095,40.6685005239622,29.7825282822776,46.0849316375393,47.530815039805,54.7417846590121,74.7565610173453,65.4928055765069,42.8874718701157,3.14059357073808,4.60848010012585,6.63623353319174,15.0016659314722,17.8717065466799,15.200736288402,16.1124026100733,10.1327490938445,7.57231331975804,7.82754494025259,8.88504759543699,5.56309688581499,6.35204966362095,4.58052039476836,4.04089734889384,5.2594605981706,25.1670725812885,2.66383144048878,1.79427713218951,2.3503846290971,25.1146472241848,81.454194345813,71.0628302156989,25.0811003522507,3.00943262421218,9.03602948187307,4.14292712856459,3.43737308063638,2.40594455281163,0,3.0215755895588,2.70009000092722,4.05289082901798,2.71885445390523,2.07104124700728,14.2188666190322,23.5424675306608,15.3660245178721,23.5813515556245,15.3017608718427,17.4651333027513,22.0024260523599,21.2216108956061,19.5760717851007,25.017023964616,16.2226751929753,20.1830185283102,21.3502637031332,25.3539603523282,30.4982340154306,27.6250340944183,24.2198241224748,23.1491064556446,22.2526386433786,29.1453861866107,19.5435473859687,20.4097177083238,21.4592570952589,17.8776092457764,22.0215950171874,21.7459542281609,23.5977085005877,19.9932980692761,22.2718746707213,26.3736867679137,24.6760837698282,24.2321026643886,14.3230865109391,22.620778813151,25.4636726495107,22.2331414364772,30.6450407063485,35.4537239179692,32.7103047837722,33.0887128679273,22.4911800551809
|short_description=p1@Nedd9
}}

Revision as of 23:38, 5 August 2015

Short description:p1@Nedd9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nedd9_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000163623, NM_017464, uc007qfd.2_5end
EntrezGene:18003
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nedd9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.37
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I558.63
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I662.79
CD326+ enterocyte, pool1.CNhs13542.11848-124I358.68
CD326+ enterocyte, pool2.CNhs13197.11849-124I462.61
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I742.14
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I836.21
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E917.43
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E774.05
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F257.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.73
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F18.85
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.25
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.07
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.04
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.99
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.37
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A326.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.61
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D146.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D238.54
GP2+ M cell, pool1.CNhs13228.11845-124H935.60
GP2+ M cell, pool2.CNhs13231.11846-124I142.65
GP2+ M cell, pool3.CNhs13240.11847-124I243.53
Ileum epithelium, pool1.CNhs13199.10252-104B933.82
Ileum epithelium, pool2.CNhs13232.10253-104C134.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C815.52
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F527.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F619.45
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F723.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D825.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D926.05
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B317.44
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C241.21
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B845.69
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C365.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C420.02
Mouse Astrocytes, donor3.CNhs12107.11633-122C438.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A233.72
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I916.68
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C165.86
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E173.93
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5103.65
Mouse Granule cells, donor1.CNhs12131.11713-123C36.68
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.15
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C85.39
Mouse Microglia, donor2.CNhs12634.11736-123E811.91
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D515.03
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.61
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.09
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.93
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.78
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.66
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.37
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.73
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.68
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.79
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.61
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.53
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.57
Mouse Schwann, donor1.CNhs12507.11728-123D953.39
Mouse Schwann, donor2.CNhs12573.11746-123F931.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G343.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F46.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I727.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E312.99
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I818.02
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G621.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H161.60
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I825.48
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G135.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G235.72
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G337.41
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B619.87
accessory axillary lymph node, adult.CNhs10475.1063-29H925.89
adrenal gland, adult.CNhs10508.49-24D714.84
adrenal gland, embryo E14.CNhs11038.406-44C59.02
adrenal gland, embryo E16.CNhs11004.1254-43D613.40
adrenal gland, embryo E17.CNhs11043.1263-45I117.30
adrenal gland, embryo E18.CNhs11026.1262-18F519.74
adrenal gland, neonate N00.CNhs11191.1311-23C127.52
adrenal gland, neonate N25.CNhs11223.1377-27I318.22
amnion, adult pregnant day17.5.CNhs10488.583-22A877.62
aorta, adult.CNhs10498.46-23H129.21
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F528.47
bone (os femoris), neonate N16.CNhs11225.1525-43A617.67
bone (os femoris), neonate N20.CNhs11195.1350-25C315.03
cecum, adult.CNhs10467.37-13H454.05
cerebellum, adult.CNhs10494.15-8B28.49
cerebellum, neonate N30.CNhs11135.1395-42I24.82
colon, adult.CNhs10468.36-18H740.11
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.03
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.21
corpora quadrigemina, adult.CNhs10501.16-22A48.84
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F127.90
cortex, adult.CNhs10473.12-14D55.39
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F27.48
diencephalon, neonate N30.CNhs11201.1388-42B27.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B121.18
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A225.01
epididymis, adult.CNhs10490.58-23B234.62
eyeball, adult.CNhs10484.31-12G427.36
eyeball, embryo E12.CNhs11016.345-16C627.20
eyeball, embryo E14.CNhs10521.399-16E217.47
eyeball, embryo E15.CNhs10593.426-16C925.03
eyeball, embryo E17.CNhs11023.1261-18D421.25
eyeball, neonate N00.CNhs11207.633-15C621.50
eyeball, neonate N01.CNhs11140.1532-43E717.17
eyeball, neonate N02.CNhs11205.1551-44G816.68
eyeball, neonate N16.CNhs11188.777-19A213.97
forelimb, embryo E11.CNhs10596.335-25E27.54
forelimb, embryo E12.CNhs10600.359-14H217.97
forelimb, embryo E13.CNhs10589.384-1E225.34
forelimb, embryo E14.CNhs10577.413-26A822.14
forelimb, embryo E15.CNhs11007.437-20E737.81
forelimb, embryo E17.CNhs10598.1517-43C437.61
forelimb, embryo E18.CNhs11008.1520-43B539.51
gonad, embryo E13.CNhs11044.1564-45I617.32
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.89
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.96
heart, embryo E11.CNhs10586.331-24E918.43
heart, embryo E12.CNhs11015.353-12F522.98
heart, embryo E13.CNhs11013.376-3I917.65
heart, embryo E14.CNhs10597.403-26D424.15
heart, embryo E15.CNhs11017.431-16C820.86
heart, embryo E16.CNhs11021.457-17C619.75
heart, embryo E17.CNhs11025.479-18E523.25
heart, embryo E18.CNhs11030.1283-20G326.02
heart, neonate N00.CNhs11213.639-21E327.56
heart, neonate N03.CNhs11221.1349-25I226.82
heart, neonate N10.CNhs11118.749-24G125.12
heart, neonate N16.CNhs11209.782-15G126.35
heart, neonate N20.CNhs11127.821-26I631.29
heart, neonate N25.CNhs11196.1351-25D325.91
heart, neonate N30.CNhs11202.1390-42D227.65
hippocampus, adult.CNhs10478.13-16E87.99
hippocampus, neonate N00.CNhs11228.627-43G118.42
intestinal mucosa, adult.CNhs10506.860-29I360.14
intestine, adult.CNhs10496.178-9A333.85
intestine, embryo E12.CNhs11019.1251-16I519.84
intestine, embryo E13.CNhs11010.381-16D526.71
intestine, embryo E15.CNhs10602.976-16D838.02
intestine, embryo E16.CNhs10585.463-22H447.19
intestine, embryo E17.CNhs10582.482-18D340.92
intestine, embryo E18.CNhs10526.1289-20F748.13
intestine, neonate N00.CNhs11126.644-26D136.54
intestine, neonate N01.CNhs11192.1322-23E941.67
intestine, neonate N06.CNhs11102.688-20B833.68
intestine, neonate N07.CNhs11095.720-20F247.75
intestine, neonate N10.CNhs11098.755-23A537.43
intestine, neonate N20.CNhs11187.827-18D129.66
intestine, neonate N25.CNhs11121.1352-25E351.01
intestine, neonate N30.CNhs11131.1384-42G156.76
kidney, embryo E14.CNhs10606.411-4I913.47
kidney, embryo E15.CNhs10997.434-16F816.34
kidney, embryo E16.CNhs10584.464-22A539.45
kidney, embryo E17.CNhs11028.483-18I220.98
kidney, embryo E18.CNhs11001.1288-20C720.17
kidney, neonate N00.CNhs11214.646-21G729.95
kidney, neonate N10.CNhs11206.758-6D551.54
kidney, neonate N20.CNhs11113.832-19I156.24
kidney, neonate N25.CNhs11122.1353-25F351.02
kidney, neonate N30.CNhs11203.1385-42H151.21
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F83.34
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D73.04
liver, embryo E16.CNhs10523.462-17F55.31
liver, embryo E17.CNhs10510.481-18A310.95
liver, embryo E18.CNhs10579.499-43G421.00
liver, neonate N00.CNhs11117.641-24F411.03
liver, neonate N03.CNhs11123.1345-25G210.71
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H214.51
liver, neonate N10.CNhs11115.751-24B912.48
liver, neonate N20.CNhs11220.823-25A36.57
liver, neonate N25.CNhs11198.1368-26H17.18
liver, neonate N30.CNhs11106.1382-42D16.75
lung, adult.CNhs10474.28-22B184.62
lung, embryo E12.CNhs10522.354-16G233.92
lung, embryo E14.CNhs10604.404-26F864.53
lung, embryo E15.CNhs11020.432-17C552.62
lung, embryo E16.CNhs10998.458-17B658.44
lung, embryo E17.CNhs10605.480-44A6111.89
lung, embryo E18.CNhs10583.1287-20I699.50
lung, neonate N00.CNhs11224.640-42C6114.35
lung, neonate N06.CNhs11212.683-20E5110.82
lung, neonate N07.CNhs11111.715-19A3165.43
lung, neonate N10.CNhs11219.750-23E6153.55
lung, neonate N20.CNhs11109.822-18A480.46
lung, neonate N25.CNhs11119.1359-25C7112.94
lung, neonate N30.CNhs11133.1394-42H296.63
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B626.06
mammary gland, adult pregnant day19.CNhs10476.588-5H227.32
medulla oblongata, adult.CNhs10477.17-12C214.93
medulla oblongata, neonate N30.CNhs11200.1396-42A312.66
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C720.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C215.15
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E183.61
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E286.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E386.82
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D772.65
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D856.81
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D947.27
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D472.46
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D552.90
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D657.71
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I729.24
ovary, embryo E18.CNhs11040.505-44H713.35
ovary, neonate N00.CNhs11217.1299-22I420.52
oviduct, adult pregnant day01.CNhs10500.988-6G624.91
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F410.20
pancreas, embryo E15.CNhs11042.1556-45F213.60
pancreas, embryo E16.CNhs11003.460-26E519.24
pancreas, embryo E17.CNhs10599.1558-45G315.65
pancreas, embryo E18.CNhs10580.1535-43I732.90
pancreas, neonate N00.CNhs11105.645-26G925.33
pancreas, neonate N01.CNhs11138.1531-43D720.36
pancreas, neonate N02.CNhs11139.1539-43D824.24
pancreas, neonate N16.CNhs11136.787-43B618.01
pancreas, neonate N25.CNhs11094.1555-45E215.81
pancreas, neonate N30.CNhs11182.1548-44H514.44
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E69.00
pituitary gland, embryo E13.CNhs11009.370-44C74.27
pituitary gland, embryo E14.CNhs11037.398-44A57.72
pituitary gland, embryo E15.CNhs10592.427-16B96.03
pituitary gland, embryo E16.CNhs11036.449-43F68.03
pituitary gland, embryo E17.CNhs11039.1265-44F57.24
pituitary gland, neonate N00.CNhs11190.1308-22E99.74
placenta, adult pregnant day10.CNhs10472.539-13I741.07
placenta, adult pregnant day17.CNhs10464.577-18G330.08
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C319.62
skin, neonate N00.CNhs11124.650-25G428.58
skin, neonate N03.CNhs11215.662-22H348.97
skin, neonate N06.CNhs11097.693-20I532.83
skin, neonate N10.CNhs11108.762-6C434.96
small intestine, neonate N16.CNhs11114.790-21I155.38
spinal cord, adult.CNhs10505.24-13C919.47
spleen, adult.CNhs10465.25-2G27.52
spleen, embryo E16.CNhs11035.461-43C19.08
spleen, embryo E18.CNhs11011.1271-21F210.93
spleen, neonate N10.CNhs11116.752-24D16.78
spleen, neonate N20.CNhs11112.824-19H17.38
spleen, neonate N25.CNhs11099.1354-25G38.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C623.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C919.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D325.43
stomach, adult.CNhs10503.33-1H629.59
stomach, embryo E12.CNhs10588.356-43E314.39
stomach, embryo E15.CNhs10603.1252-16G825.41
stomach, embryo E16.CNhs11022.459-17D421.06
stomach, embryo E17.CNhs11006.1035-18D518.19
stomach, embryo E18.CNhs10999.1286-20C617.03
stomach, neonate N03.CNhs11193.1340-24B830.88
stomach, neonate N07.CNhs11210.718-18A935.38
stomach, neonate N25.CNhs11104.1355-25E432.46
stomach, neonate N30.CNhs11134.1386-42I156.12
submandibular gland, adult.CNhs10469.59-29C169.59
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F540.67
testis, embryo E15.CNhs11034.443-27C529.78
testis, embryo E16.CNhs11033.470-26G546.08
testis, embryo E17.CNhs11029.486-18I547.53
testis, embryo E18.CNhs11027.503-18G554.74
testis, neonate N00.CNhs11189.1300-22B774.76
testis, neonate N07.CNhs11222.726-26I465.49
testis, neonate N10.CNhs11204.763-44D942.89
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E24.61
thymus, adult.CNhs10471.38-12B56.64
thymus, embryo E14.CNhs11041.402-44I415.00
thymus, embryo E15.CNhs11005.430-45I217.87
thymus, embryo E16.CNhs11002.456-26C515.20
thymus, embryo E17.CNhs10581.478-18C116.11
thymus, embryo E18.CNhs10595.1273-19G410.13
thymus, neonate N02.CNhs11181.1541-43F87.57
thymus, neonate N03.CNhs11137.2104-43C77.83
thymus, neonate N06.CNhs11197.681-26C48.89
thymus, neonate N07.CNhs11211.713-19D35.56
thymus, neonate N10.CNhs11194.748-24E46.35
thymus, neonate N20.CNhs11186.820-7A24.58
thymus, neonate N25.CNhs11125.1362-25G74.04
thymus, neonate N30.CNhs11132.1393-42G25.26
tongue, adult.CNhs10499.32-1B425.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.79
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.35
urinary bladder, adult.CNhs10481.879-12E425.11
uterus, adult pregnant day19.CNhs10497.590-15F581.45
uterus, adult.CNhs10509.92-27E571.06
vagina, adult.CNhs10502.89-27D525.08
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I814.22
whole body, embryo E12.CNhs10587.857-27C923.54
whole body, embryo E13.CNhs10512.372-23H215.37
whole body, embryo E14.5.CNhs10578.420-27D223.58
whole body, embryo E14.CNhs10519.395-14B115.30
whole body, embryo E16.CNhs10514.453-14F217.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G522.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G521.22
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.58
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G525.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.22
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G520.18
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G521.35
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G525.35
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G530.50
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G527.63
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G524.22
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G523.15
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G522.25
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G529.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G519.54
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G520.41
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G521.46
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.88
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G522.02
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G521.75
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G523.60
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G519.99
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G522.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G526.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G524.68
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G524.23
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G514.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G522.62
whole body, embryo E17.5.CNhs10513.490-9F925.46
whole body, embryo E17.CNhs10517.475-3I522.23
whole body, embryo E18.CNhs10516.493-3B330.65
whole body, neonate N00.CNhs10525.657-19C235.45
whole body, neonate N01.CNhs10576.659-23C632.71
whole body, neonate N06.CNhs10515.692-21D133.09
whole body, neonate N10.CNhs10518.761-6B422.49





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
thoracic cavity element3.04e-1017
thoracic segment organ3.04e-1017
thoracic cavity3.04e-1017
thoracic segment of trunk3.04e-1017
respiratory primordium3.04e-1017
endoderm of foregut3.04e-1017
epithelial fold5.43e-1020
lung1.16e-0914
respiratory tube1.16e-0914
respiration organ1.16e-0914
pair of lungs1.16e-0914
lung primordium1.16e-0914
lung bud1.16e-0914
intestine3.31e-0931
epithelial bud3.94e-0817
gastrointestinal system8.97e-0747
peripheral nervous system9.21e-0711
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