FFCP PHASE1:Mm9::chr11:60956190..60956198,+: Difference between revisions
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{{FFCP|EntrezGene=57916|HGNC=|MCL_coexpression_id=50|UniProt=|association_with_transcript=23bp_to_ENSMUST00000123378_5end|description=CAGE_peak_4_at_Tnfrsf13b_5end|id=chr11:60956190..60956198,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000815,5.62e-30,1;CL:0000792,5.62e-30,1;CL:0000084,1.34e-24,11;CL:0000827,1.34e-24,11;CL:0000838,1.18e-22,12;CL:0000542,5.26e-21,13;CL:0000051,5.26e-21,13;CL:0000738,2.41e-16,17;CL:0002087,2.41e-16,17;CL:0002031,1.80e-11,25;CL:0000988,3.42e-09,32;CL:0002032,3.42e-09,32;CL:0000037,3.42e-09,32;CL:0000837,3.42e-09,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000065!5.98e-13!41;UBERON:0001004!1.36e-12!42;UBERON:0005911!3.01e-08!69;UBERON:0002370!5.08e-08!23;UBERON:0000974!5.08e-08!23;UBERON:0004807!5.08e-08!23;UBERON:0005058!5.08e-08!23;UBERON:0003351!5.08e-08!23;UBERON:0009113!5.08e-08!23;UBERON:0003295!5.08e-08!23;UBERON:0009722!5.08e-08!23;UBERON:0005562!5.08e-08!23;UBERON:0007690!5.08e-08!23;UBERON:0002048!8.49e-08!14;UBERON:0000117!8.49e-08!14;UBERON:0000171!8.49e-08!14;UBERON:0000170!8.49e-08!14;UBERON:0005597!8.49e-08!14;UBERON:0000118!8.49e-08!14;UBERON:0006562!1.18e-07!24;UBERON:0003408!1.18e-07!24;UBERON:0001557!1.18e-07!24;UBERON:0001042!1.18e-07!24;UBERON:0008814!1.18e-07!24;UBERON:0009145!1.18e-07!24|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,3.48632973292256,0,0,0,0,0,0,0,0,0,0,0.274228867211478,0,0.0850432901510698,2.78014663362479,7.05239430675126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0.159454768657487,0.491589944147214,0.518054945597687,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p4@Tnfrsf13b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:57916 | |||
|HGNC= | |||
|MCL_coexpression_id=50 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=23bp_to_ENSMUST00000123378_5end | |||
|cluster_id=chr11:60956190..60956198,+ | |||
|description=CAGE_peak_4_at_Tnfrsf13b_5end | |||
|id=chr11:60956190..60956198,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,5.62e-30,1;CL:0000792,5.62e-30,1;CL:0000084,1.34e-24,11;CL:0000827,1.34e-24,11;CL:0000838,1.18e-22,12;CL:0000542,5.26e-21,13;CL:0000051,5.26e-21,13;CL:0000738,2.41e-16,17;CL:0002087,2.41e-16,17;CL:0002031,1.80e-11,25;CL:0000988,3.42e-09,32;CL:0002032,3.42e-09,32;CL:0000037,3.42e-09,32;CL:0000837,3.42e-09,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!5.98e-13!41;UBERON:0001004!1.36e-12!42;UBERON:0005911!3.01e-08!69;UBERON:0002370!5.08e-08!23;UBERON:0000974!5.08e-08!23;UBERON:0004807!5.08e-08!23;UBERON:0005058!5.08e-08!23;UBERON:0003351!5.08e-08!23;UBERON:0009113!5.08e-08!23;UBERON:0003295!5.08e-08!23;UBERON:0009722!5.08e-08!23;UBERON:0005562!5.08e-08!23;UBERON:0007690!5.08e-08!23;UBERON:0002048!8.49e-08!14;UBERON:0000117!8.49e-08!14;UBERON:0000171!8.49e-08!14;UBERON:0000170!8.49e-08!14;UBERON:0005597!8.49e-08!14;UBERON:0000118!8.49e-08!14;UBERON:0006562!1.18e-07!24;UBERON:0003408!1.18e-07!24;UBERON:0001557!1.18e-07!24;UBERON:0001042!1.18e-07!24;UBERON:0008814!1.18e-07!24;UBERON:0009145!1.18e-07!24 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,3.48632973292256,0,0,0,0,0,0,0,0,0,0,0.274228867211478,0,0.0850432901510698,2.78014663362479,7.05239430675126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0.159454768657487,0.491589944147214,0.518054945597687,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@Tnfrsf13b | |||
}} |
Revision as of 05:50, 6 August 2015
Short description: | p4@Tnfrsf13b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tnfrsf13b_5end |
Coexpression cluster: | MCL_coexpression_mm9:50 |
Association with transcript: | 23bp_to_ENSMUST00000123378_5end |
EntrezGene: | 57916 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 5.62e-30 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.62e-30 | 1 |
T cell | 1.34e-24 | 11 |
pro-T cell | 1.34e-24 | 11 |
lymphoid lineage restricted progenitor cell | 1.18e-22 | 12 |
lymphocyte | 5.26e-21 | 13 |
common lymphoid progenitor | 5.26e-21 | 13 |
leukocyte | 2.41e-16 | 17 |
nongranular leukocyte | 2.41e-16 | 17 |
hematopoietic lineage restricted progenitor cell | 1.80e-11 | 25 |
hematopoietic cell | 3.42e-09 | 32 |
hematopoietic oligopotent progenitor cell | 3.42e-09 | 32 |
hematopoietic stem cell | 3.42e-09 | 32 |
hematopoietic multipotent progenitor cell | 3.42e-09 | 32 |