FFCP PHASE1:Mm9::chr6:93862514..93862557,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2452 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:93862514..93862557,- | |||
|description=CAGE_peak_at_chr6:93862514..93862557,- | |description=CAGE_peak_at_chr6:93862514..93862557,- | ||
|id=chr6:93862514..93862557,- | |id=chr6:93862514..93862557,- | ||
|ontology_enrichment_celltype=CL:0000221!2.75e-18!44;CL:0000133!2.75e-18!44;CL:0000540!2.96e-18!33;CL:0000047!2.96e-18!33;CL:0000031!2.96e-18!33;CL:0000404!2.96e-18!33;CL:0002319!1.10e-17!43;CL:0000393!5.99e-13!39;CL:0000211!5.99e-13!39;CL:0000055!1.28e-12!50;CL:0000117!1.51e-11!23;CL:0000337!1.51e-11!23;CL:0000107!7.05e-08!9 | |ontology_enrichment_celltype=CL:0000221!2.75e-18!44;CL:0000133!2.75e-18!44;CL:0000540!2.96e-18!33;CL:0000047!2.96e-18!33;CL:0000031!2.96e-18!33;CL:0000404!2.96e-18!33;CL:0002319!1.10e-17!43;CL:0000393!5.99e-13!39;CL:0000211!5.99e-13!39;CL:0000055!1.28e-12!50;CL:0000117!1.51e-11!23;CL:0000337!1.51e-11!23;CL:0000107!7.05e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.82e-23,33;CL:0000047,7.82e-23,33;CL:0000031,7.82e-23,33;CL:0000404,7.82e-23,33;CL:0000221,5.85e-19,44;CL:0000133,5.85e-19,44;CL:0002319,4.39e-18,43;CL:0000393,7.00e-18,39;CL:0000211,7.00e-18,39;CL:0000117,1.15e-13,23;CL:0000337,1.15e-13,23;CL:0000107,6.25e-12,9;CL:0002321,2.02e-08,70;CL:0002609,3.03e-08,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.27e-27!102;UBERON:0000924!4.27e-27!102;UBERON:0006601!4.27e-27!102;UBERON:0000073!9.23e-23!75;UBERON:0001016!9.23e-23!75;UBERON:0001017!2.06e-22!73;UBERON:0005743!2.06e-22!73;UBERON:0000033!3.52e-16!63;UBERON:0002346!1.20e-15!71;UBERON:0003075!1.20e-15!71;UBERON:0007284!1.20e-15!71;UBERON:0003056!2.04e-14!49;UBERON:0001049!1.75e-12!52;UBERON:0005068!1.75e-12!52;UBERON:0006241!1.75e-12!52;UBERON:0007135!1.75e-12!52;UBERON:0000955!7.91e-12!50;UBERON:0006238!7.91e-12!50;UBERON:0002616!2.87e-11!49;UBERON:0002020!2.68e-10!34;UBERON:0003080!9.46e-10!40;UBERON:0002780!1.99e-09!39;UBERON:0001890!1.99e-09!39;UBERON:0006240!1.99e-09!39;UBERON:0000153!1.63e-08!94;UBERON:0002791!1.78e-08!29;UBERON:0003528!1.78e-08!29;UBERON:0001893!1.78e-08!29;UBERON:0002410!7.05e-08!9;UBERON:0000010!9.66e-08!11;UBERON:0005085!1.88e-07!13;UBERON:0007811!8.91e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.25e-24,95;UBERON:0000924,2.25e-24,95;UBERON:0006601,2.25e-24,95;UBERON:0010371,1.87e-17,73;UBERON:0001017,2.81e-15,73;UBERON:0001016,1.50e-14,75;UBERON:0002346,6.39e-13,64;UBERON:0003075,6.39e-13,64;UBERON:0007284,6.39e-13,64;UBERON:0002410,6.25e-12,9;UBERON:0000010,2.83e-09,11;UBERON:0003056,4.20e-09,49;UBERON:0002020,1.77e-07,34;UBERON:0000970,3.50e-07,9;UBERON:0000019,3.50e-07,9;UBERON:0000047,3.50e-07,9;UBERON:0010312,3.50e-07,9;UBERON:0004088,3.50e-07,9;UBERON:0002104,3.50e-07,9;UBERON:0001456,3.50e-07,9;UBERON:0003072,3.50e-07,9;UBERON:0004128,3.50e-07,9;UBERON:0003071,3.50e-07,9;UBERON:0005085,4.09e-07,13;UBERON:0000073,6.01e-07,54;UBERON:0010314,9.96e-07,92 | |||
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| ||
|short_description=p@chr6:93862514..93862557,- | |short_description=p@chr6:93862514..93862557,- | ||
}} | }} |
Latest revision as of 08:27, 6 August 2015
Short description: | p@chr6:93862514..93862557, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:93862514..93862557, - |
Coexpression cluster: | MCL_coexpression_mm9:2452 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.82e-23 | 33 |
neuronal stem cell | 7.82e-23 | 33 |
neuroblast | 7.82e-23 | 33 |
electrically signaling cell | 7.82e-23 | 33 |
ectodermal cell | 5.85e-19 | 44 |
neurectodermal cell | 5.85e-19 | 44 |
neural cell | 4.39e-18 | 43 |
electrically responsive cell | 7.00e-18 | 39 |
electrically active cell | 7.00e-18 | 39 |
CNS neuron (sensu Vertebrata) | 1.15e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.15e-13 | 23 |
autonomic neuron | 6.25e-12 | 9 |
embryonic cell | 2.02e-08 | 70 |
neuron of cerebral cortex | 3.03e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.25e-24 | 95 |
ectoderm | 2.25e-24 | 95 |
presumptive ectoderm | 2.25e-24 | 95 |
ecto-epithelium | 1.87e-17 | 73 |
central nervous system | 2.81e-15 | 73 |
nervous system | 1.50e-14 | 75 |
neurectoderm | 6.39e-13 | 64 |
neural plate | 6.39e-13 | 64 |
presumptive neural plate | 6.39e-13 | 64 |
autonomic nervous system | 6.25e-12 | 9 |
peripheral nervous system | 2.83e-09 | 11 |
pre-chordal neural plate | 4.20e-09 | 49 |
gray matter | 1.77e-07 | 34 |
eye | 3.50e-07 | 9 |
camera-type eye | 3.50e-07 | 9 |
simple eye | 3.50e-07 | 9 |
immature eye | 3.50e-07 | 9 |
ocular region | 3.50e-07 | 9 |
visual system | 3.50e-07 | 9 |
face | 3.50e-07 | 9 |
optic cup | 3.50e-07 | 9 |
optic vesicle | 3.50e-07 | 9 |
eye primordium | 3.50e-07 | 9 |
ectodermal placode | 4.09e-07 | 13 |
regional part of nervous system | 6.01e-07 | 54 |
structure with developmental contribution from neural crest | 9.96e-07 | 92 |