FFCP PHASE1:Hg19::chr7:116311841..116311852,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4233 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=7029 | |||
|TSSclassifier=strong | |||
|UniProt=C9JVH4 | |||
|association_with_transcript=-395bp_to_ENST00000437703_5end | |||
|cluster_id=chr7:116311841..116311852,+ | |||
|coexpression_cluster_id=C1318 | |||
|description=CAGE_peak_33_at_MET_5end | |||
|id=chr7:116311841..116311852,+ | |||
|ontology_enrichment_celltype=CL:0000148!9.41e-32!10;CL:0000541!9.41e-32!10;CL:0000147!1.40e-22!14;CL:0000710!1.11e-15!20;CL:0002567!6.98e-13!3;CL:0000075!1.69e-11!27;CL:0002566!2.37e-10!1;CL:0000333!2.12e-09!41;CL:0002077!2.55e-09!33;CL:0000133!2.94e-08!59;CL:0000325!8.28e-08!39;CL:0000221!9.96e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002566;2.21e-40;1!CL:0000148;3.88e-36;10!CL:0000147;4.10e-26;14!CL:0000710;1.42e-18;20!CL:0002567;1.83e-14;3!CL:0000075;5.42e-14;27!CL:0002077;9.29e-11;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002566,3.30e-40,1;CL:0000148,3.88e-36,10;CL:0000541,3.88e-36,10;CL:0000147,4.10e-26,14;CL:0000710,1.42e-18,20;CL:0002567,1.60e-14,3;CL:0000075,5.42e-14,27;CL:0002077,2.76e-11,34;CL:0000333,4.33e-09,41 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.22e-14;3 | |||
|ontology_enrichment_disease=DOID:1909!7.03e-19!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;5.69e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,5.70e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0006331!2.00e-12!3;UBERON:0002038!4.44e-10!1;UBERON:0009661!4.44e-10!1;UBERON:0000997!9.82e-10!1;UBERON:0005056!9.82e-10!1;UBERON:0002022!1.17e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;2.53e-09;5!UBERON:0005388;2.53e-09;5!UBERON:0001802;2.53e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,5.54e-08,6;UBERON:0005388,5.54e-08,6;UBERON:0001802,5.54e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07946420296687,0.381988425558278,1.17217447210047,0,0.514137463516618,0.600686115687835,2.28661146104463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454947352624943,1.14186133417987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14496794377288,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p33@MET | |||
}} |
Latest revision as of 17:54, 15 September 2015
Short description: | p33@MET |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_33_at_MET_5end |
Coexpression cluster: | C1318_retina_Melanocyte_globus_caudate_eye_melanoma_nucleus |
Association with transcript: | -395bp_to_ENST00000437703_5end |
EntrezGene: | MET |
HGNC: | 7029 |
UniProt: | C9JVH4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 3.30e-40 | 1 |
melanocyte | 3.88e-36 | 10 |
melanoblast | 3.88e-36 | 10 |
pigment cell | 4.10e-26 | 14 |
neurecto-epithelial cell | 1.42e-18 | 20 |
light melanocyte | 1.60e-14 | 3 |
columnar/cuboidal epithelial cell | 5.42e-14 | 27 |
ecto-epithelial cell | 2.76e-11 | 34 |
migratory neural crest cell | 4.33e-09 | 41 |
Ontology term | p-value | n |
---|---|---|
retina | 5.54e-08 | 6 |
photoreceptor array | 5.54e-08 | 6 |
posterior segment of eyeball | 5.54e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
melanoma | 5.70e-21 | 2 |