FFCP PHASE1:Hg19::chr19:1257467..1257484,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:1257467..1257484,+
|short_description=p5@MIDN
|description=CAGE_peak_5_at_MIDN_5end
|association_with_transcript=222bp_to_AK075506_5end
|EntrezGene=90007...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=90007 | |EntrezGene=90007 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=16298 | |HGNC=16298 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=222bp_to_AK075506_5end | |||
|cluster_id=chr19:1257467..1257484,+ | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_5_at_MIDN_5end | |||
|id=chr19:1257467..1257484,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.37e-09!42;CL:0000860!3.62e-09!45;CL:0000766!9.83e-09!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.84e-12;33!CL:0002057;8.84e-12;33!CL:0000473;4.99e-09;39!CL:0000234;4.99e-09;39!CL:0000766;3.75e-08;69!CL:0000094;7.65e-08;8!CL:0000576;1.87e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.91e-14,72;CL:0000860,8.58e-13,42;CL:0002057,8.58e-13,42;CL:0000473,1.00e-11,48;CL:0000234,1.00e-11,48;CL:0000557,7.39e-10,67;CL:0000839,1.04e-08,66;CL:0000094,4.88e-08,8;CL:0000738,1.40e-07,136;CL:0002009,1.53e-07,61;CL:0002194,2.65e-07,59;CL:0000576,2.65e-07,59;CL:0000040,2.65e-07,59;CL:0000559,2.65e-07,59;CL:0000763,4.82e-07,108;CL:0000049,4.82e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;9.35e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.40e-08,76;UBERON:0004765,2.20e-07,90;UBERON:0001434,3.23e-07,100;UBERON:0002390,4.10e-07,98;UBERON:0003061,4.10e-07,98;UBERON:0001474,5.63e-07,82 | |||
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| ||
|short_description=p5@MIDN | |||
}} | }} |
Latest revision as of 18:44, 15 September 2015
Short description: | p5@MIDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MIDN_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 222bp_to_AK075506_5end |
EntrezGene: | MIDN |
HGNC: | 16298 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.91e-14 | 72 |
classical monocyte | 8.58e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.58e-13 | 42 |
defensive cell | 1.00e-11 | 48 |
phagocyte | 1.00e-11 | 48 |
granulocyte monocyte progenitor cell | 7.39e-10 | 67 |
myeloid lineage restricted progenitor cell | 1.04e-08 | 66 |
granulocyte | 4.88e-08 | 8 |
leukocyte | 1.40e-07 | 136 |
macrophage dendritic cell progenitor | 1.53e-07 | 61 |
monopoietic cell | 2.65e-07 | 59 |
monocyte | 2.65e-07 | 59 |
monoblast | 2.65e-07 | 59 |
promonocyte | 2.65e-07 | 59 |
myeloid cell | 4.82e-07 | 108 |
common myeloid progenitor | 4.82e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.40e-08 | 76 |
skeletal element | 2.20e-07 | 90 |
skeletal system | 3.23e-07 | 100 |
hematopoietic system | 4.10e-07 | 98 |
blood island | 4.10e-07 | 98 |
bone element | 5.63e-07 | 82 |