FFCP PHASE1:Hg19::chr14:70496936..70496939,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64093 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=20318 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-369bp_to_AK098441_5end | |||
|cluster_id=chr14:70496936..70496939,+ | |||
|description=CAGE_peak_3_at_SMOC1_5end | |||
|id=chr14:70496936..70496939,+ | |||
|ontology_enrichment_celltype=CL:0000181!5.15e-07!12;CL:0000417!5.15e-07!12;CL:0000668!5.15e-07!12;CL:0000414!5.15e-07!12;CL:0000412!5.15e-07!12;CL:0000182!5.15e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.53e-18;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.80e-18,12 | |||
|ontology_enrichment_development_v019=UBERON:0001041;4.73e-11;30!UBERON:0009497;8.39e-10;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3905;7.86e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3905,6.60e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0001017!9.01e-13!82;UBERON:0005743!1.03e-12!86;UBERON:0001049!3.72e-12!57;UBERON:0005068!3.72e-12!57;UBERON:0006241!3.72e-12!57;UBERON:0007135!3.72e-12!57;UBERON:0000073!9.80e-11!94;UBERON:0001016!9.80e-11!94;UBERON:0000955!1.07e-10!69;UBERON:0006238!1.07e-10!69;UBERON:0002616!2.60e-10!59;UBERON:0002298!3.62e-10!8;UBERON:0008835!7.63e-10!22;UBERON:0003894!7.63e-10!22;UBERON:0003075!7.65e-10!86;UBERON:0007284!7.65e-10!86;UBERON:0009854!2.75e-09!23;UBERON:0002346!4.40e-09!90;UBERON:0007023!6.52e-09!115;UBERON:0003076!2.27e-08!15;UBERON:0003057!2.27e-08!15;UBERON:0007499!2.59e-08!25;UBERON:0009497!2.59e-08!25;UBERON:0000015!2.59e-08!25;UBERON:0002423!2.59e-08!25;UBERON:0006235!2.59e-08!25;UBERON:0004161!2.59e-08!25;UBERON:0002107!4.06e-08!19;UBERON:0006925!4.06e-08!19;UBERON:0008836!4.06e-08!19;UBERON:0009856!6.97e-08!26;UBERON:0000033!5.10e-07!123;UBERON:0000153!5.88e-07!129;UBERON:0007811!5.88e-07!129;UBERON:0000025!8.76e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;8.19e-19;25!UBERON:0002107;1.90e-17;19!UBERON:0006925;1.90e-17;19!UBERON:0002365;1.11e-10;31!UBERON:0002330;1.11e-10;31!UBERON:0002368;2.61e-10;33!UBERON:0001897;5.74e-08;2!UBERON:0010225;5.74e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,1.96e-21,22;UBERON:0003894,1.96e-21,22;UBERON:0009854,1.70e-20,23;UBERON:0007499,7.72e-19,25;UBERON:0009497,7.72e-19,25;UBERON:0000015,7.72e-19,25;UBERON:0002423,7.72e-19,25;UBERON:0006235,7.72e-19,25;UBERON:0004161,7.72e-19,25;UBERON:0009856,4.17e-18,26;UBERON:0002107,1.91e-17,19;UBERON:0006925,1.91e-17,19;UBERON:0008836,1.91e-17,19;UBERON:0002365,1.08e-10,31;UBERON:0002330,1.08e-10,31;UBERON:0005911,1.22e-09,82;UBERON:0002368,1.83e-09,35;UBERON:0001041,4.85e-09,87;UBERON:0003929,1.44e-08,54;UBERON:0001897,4.69e-08,2;UBERON:0010225,4.69e-08,2;UBERON:0000949,2.41e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.434539556882471,0,0.973269740605272,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0.386521706326594,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0.721879481669586,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,1.96565443335525,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.107420244868274,0,0.255679882248303,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0.503865495708552,0,0,0,0.0898683511473268,1.43216939740487,0,0,0,0,1.93866549219044,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,1.85195387982283,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0.30607276163049,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0.387025325156341,0.292357268344742,0.164230914106418,0,0,0,0.137041924646751,0.397429223405979,0.0633107959558787,0,0,0,0,0.288180834308212,0,1.02956998717179,1.00838358591705,0,0.707082103850386,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0.0824158583811665,0.13480708770837,1.08270229666224,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0,0,0,1.97216073266129,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,1.32506888912221,0.129282956361551,0.26446520348538,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.18628920882415,0.276697269872462,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0.252071696221718,0,0,0,0,0,0,0.231051332300676,0.381382095467167,0,0,0,0.40341013740704,0,0,0,0,0.0675375846183947,0,0,0,1.09394961803644,0,0.992422356778588,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.9164274741762,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0.109940516745429,1.20770274853339,0,0,0,0,0,0.588925401344836,0,0.8453114551668,0,0,0,0,0,0.705789743431384,0,0,0,0.430018749454354,0.157771562193185,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0,1.65833887891756,0.103432995861895,0,0.23806443146374,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p3@SMOC1 | |||
}} |
Latest revision as of 20:05, 15 September 2015
Short description: | p3@SMOC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SMOC1_5end |
Coexpression cluster: | NA |
Association with transcript: | -369bp_to_AK098441_5end |
EntrezGene: | SMOC1 |
HGNC: | 20318 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.80e-18 | 12 |
Ontology term | p-value | n |
---|---|---|
hepatic diverticulum | 1.96e-21 | 22 |
liver primordium | 1.96e-21 | 22 |
digestive tract diverticulum | 1.70e-20 | 23 |
epithelial sac | 7.72e-19 | 25 |
epithelium of foregut-midgut junction | 7.72e-19 | 25 |
anatomical boundary | 7.72e-19 | 25 |
hepatobiliary system | 7.72e-19 | 25 |
foregut-midgut junction | 7.72e-19 | 25 |
septum transversum | 7.72e-19 | 25 |
sac | 4.17e-18 | 26 |
liver | 1.91e-17 | 19 |
digestive gland | 1.91e-17 | 19 |
liver bud | 1.91e-17 | 19 |
exocrine gland | 1.08e-10 | 31 |
exocrine system | 1.08e-10 | 31 |
endo-epithelium | 1.22e-09 | 82 |
endocrine gland | 1.83e-09 | 35 |
foregut | 4.85e-09 | 87 |
gut epithelium | 1.44e-08 | 54 |
dorsal plus ventral thalamus | 4.69e-08 | 2 |
thalamic complex | 4.69e-08 | 2 |
endocrine system | 2.41e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
lung carcinoma | 6.60e-07 | 9 |