FFCP PHASE1:Hg19::chr12:9066472..9066482,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1911 | |EntrezGene=1911 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3182 | |HGNC=3182 | ||
|TSSclassifier=strong | |||
|UniProt=F5H6F5 | |UniProt=F5H6F5 | ||
|association_with_transcript=-9bp_to_ENST00000538657_5end | |association_with_transcript=-9bp_to_ENST00000538657_5end | ||
|cluster_id=chr12:9066472..9066482,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_8_at_PHC1_5end | |description=CAGE_peak_8_at_PHC1_5end | ||
|id=chr12:9066472..9066482,+ | |id=chr12:9066472..9066482,+ | ||
|ontology_enrichment_celltype=CL:0002322!6.28e-46!5;CL:0000039!1.44e-32!7;CL:0000586!1.44e-32!7;CL:0000540!1.15e-14!6;CL:0000031!1.15e-14!6;CL:0000404!1.15e-14!6;CL:0000047!3.90e-11!8;CL:0000148!6.32e-09!10;CL:0000541!6.32e-09!10 | |ontology_enrichment_celltype=CL:0002322!6.28e-46!5;CL:0000039!1.44e-32!7;CL:0000586!1.44e-32!7;CL:0000540!1.15e-14!6;CL:0000031!1.15e-14!6;CL:0000404!1.15e-14!6;CL:0000047!3.90e-11!8;CL:0000148!6.32e-09!10;CL:0000541!6.32e-09!10 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.51e-45;7!CL:0000586;3.51e-45;7!CL:0002322;2.55e-36;5!CL:0000540;2.33e-14;6!CL:0000404;2.33e-14;6!CL:0002321;1.30e-12;15!CL:0000148;5.36e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.94e-45,7;CL:0000586,3.94e-45,7;CL:0002322,2.88e-36,5;CL:0000540,1.90e-14,6;CL:0000031,1.90e-14,6;CL:0000404,1.90e-14,6;CL:0000047,4.43e-11,8;CL:0000148,6.04e-09,10;CL:0000541,6.04e-09,10 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.18e-32;10!UBERON:0005564;8.18e-32;10!CL:0000031;2.33e-14;6 | |||
|ontology_enrichment_disease=DOID:3095!1.79e-19!22;DOID:2994!1.79e-19!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;9.89e-15;22!DOID:2994;9.89e-15;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.03e-14,22;DOID:2994,1.03e-14,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!8.47e-19!8;UBERON:0003135!9.76e-14!11;UBERON:0000991!7.61e-11!21;UBERON:0009196!7.61e-11!21;UBERON:0009117!7.61e-11!21;UBERON:0005564!7.61e-11!21;UBERON:0004176!2.41e-10!22;UBERON:0003101!6.06e-07!22;UBERON:0000079!6.06e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.29e-39;8!UBERON:0003135;5.65e-29;11!UBERON:0000991;2.06e-15;21!UBERON:0003101;9.89e-15;22!UBERON:0000079;9.89e-15;22!UBERON:0000922;1.86e-12;49!UBERON:0000007;3.70e-11;2!UBERON:0002323;4.66e-07;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.43e-39,8;UBERON:0003135,6.08e-29,11;UBERON:0000991,2.14e-15,21;UBERON:0009196,2.14e-15,21;UBERON:0009117,2.14e-15,21;UBERON:0005564,2.14e-15,21;UBERON:0004176,1.03e-14,22;UBERON:0003101,1.03e-14,22;UBERON:0000079,1.03e-14,22;UBERON:0000007,4.09e-11,2;UBERON:0002323,3.24e-07,46;UBERON:0003133,6.32e-07,48;UBERON:0004458,8.64e-07,49 | |||
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|short_description=p8@PHC1 | |short_description=p8@PHC1 | ||
}} | }} |
Latest revision as of 20:13, 15 September 2015
Short description: | p8@PHC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PHC1_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | -9bp_to_ENST00000538657_5end |
EntrezGene: | PHC1 |
HGNC: | 3182 |
UniProt: | F5H6F5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.94e-45 | 7 |
germ cell | 3.94e-45 | 7 |
embryonic stem cell | 2.88e-36 | 5 |
neuron | 1.90e-14 | 6 |
neuroblast | 1.90e-14 | 6 |
electrically signaling cell | 1.90e-14 | 6 |
neuronal stem cell | 4.43e-11 | 8 |
melanocyte | 6.04e-09 | 10 |
melanoblast | 6.04e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
testis | 1.43e-39 | 8 |
male reproductive organ | 6.08e-29 | 11 |
gonad | 2.14e-15 | 21 |
indifferent external genitalia | 2.14e-15 | 21 |
indifferent gonad | 2.14e-15 | 21 |
gonad primordium | 2.14e-15 | 21 |
external genitalia | 1.03e-14 | 22 |
male organism | 1.03e-14 | 22 |
male reproductive system | 1.03e-14 | 22 |
pituitary gland | 4.09e-11 | 2 |
body cavity | 3.24e-07 | 46 |
reproductive organ | 6.32e-07 | 48 |
body cavity or lining | 8.64e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.03e-14 | 22 |
germ cell cancer | 1.03e-14 | 22 |