FFCP PHASE1:Hg19::chr1:109400860..109400871,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=254268 | |EntrezGene=254268 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28398 | |HGNC=28398 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_ENST00000474186,uc001dwb.2_5end | |association_with_transcript=-10bp_to_ENST00000474186,uc001dwb.2_5end | ||
|cluster_id=chr1:109400860..109400871,- | |||
|coexpression_cluster_id=C139 | |||
|description=CAGE_peak_3_at_AKNAD1_5end | |description=CAGE_peak_3_at_AKNAD1_5end | ||
|id=chr1:109400860..109400871,- | |id=chr1:109400860..109400871,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.43e-15;2!CL:0000242;1.43e-15;2!CL:0000312;5.23e-07;5!CL:0000095;5.42e-07;17!CL:0000333;6.21e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.33e-15,2;CL:0000312,5.08e-07,5;CL:0000095,5.34e-07,17;CL:0000123,5.34e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5409!2.60e-10!4;DOID:3095!4.18e-07!22;DOID:2994!4.18e-07!22 | |ontology_enrichment_disease=DOID:5409!2.60e-10!4;DOID:3095!4.18e-07!22;DOID:2994!4.18e-07!22 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!3.44e-10!4;UBERON:0005058!3.44e-10!4;UBERON:0009113!3.44e-10!4;UBERON:0003295!3.44e-10!4;UBERON:0005562!3.44e-10!4;UBERON:0003351!4.44e-07!6;UBERON:0002619!6.34e-07!22 | |ontology_enrichment_uberon=UBERON:0002370!3.44e-10!4;UBERON:0005058!3.44e-10!4;UBERON:0009113!3.44e-10!4;UBERON:0003295!3.44e-10!4;UBERON:0005562!3.44e-10!4;UBERON:0003351!4.44e-07!6;UBERON:0002619!6.34e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;7.89e-13;20!UBERON:0002619;8.88e-12;22!UBERON:0000922;9.65e-11;49!UBERON:0002114;1.04e-10;2!UBERON:0000956;1.68e-10;25!UBERON:0000203;1.68e-10;25!UBERON:0002791;5.06e-08;32!UBERON:0001869;7.67e-08;32!UBERON:0003528;1.43e-07;34!UBERON:0002020;1.43e-07;34!UBERON:0002021;5.23e-07;5!UBERON:0002108;6.21e-07;4!UBERON:0001872;6.21e-07;5!UBERON:0000013;6.21e-07;5!UBERON:0002410;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,8.05e-13,20;UBERON:0002619,9.05e-12,22;UBERON:0002114,9.90e-11,2;UBERON:0000956,1.71e-10,25;UBERON:0000203,1.71e-10,25;UBERON:0002791,2.06e-08,32;UBERON:0001869,2.06e-08,32;UBERON:0001016,5.21e-08,89;UBERON:0003528,5.73e-08,34;UBERON:0002020,5.73e-08,34;UBERON:0001893,5.73e-08,34;UBERON:0002021,5.38e-07,5;UBERON:0001872,5.70e-07,5;UBERON:0000955,5.93e-07,68;UBERON:0006238,5.93e-07,68;UBERON:0002108,6.04e-07,4;UBERON:0000013,6.39e-07,5;UBERON:0002410,6.39e-07,5;UBERON:0002780,9.61e-07,41;UBERON:0001890,9.61e-07,41;UBERON:0003080,9.61e-07,41;UBERON:0006240,9.61e-07,41 | |||
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|short_description=p3@AKNAD1 | |short_description=p3@AKNAD1 | ||
}} | }} |
Latest revision as of 20:22, 15 September 2015
Short description: | p3@AKNAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AKNAD1_5end |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | -10bp_to_ENST00000474186, uc001dwb.2_5end |
EntrezGene: | AKNAD1 |
HGNC: | 28398 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.33e-15 | 2 |
keratinocyte | 5.08e-07 | 5 |
neuron associated cell | 5.34e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 5.34e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
neocortex | 8.05e-13 | 20 |
regional part of cerebral cortex | 9.05e-12 | 22 |
duodenum | 9.90e-11 | 2 |
cerebral cortex | 1.71e-10 | 25 |
pallium | 1.71e-10 | 25 |
regional part of telencephalon | 2.06e-08 | 32 |
cerebral hemisphere | 2.06e-08 | 32 |
nervous system | 5.21e-08 | 89 |
brain grey matter | 5.73e-08 | 34 |
gray matter | 5.73e-08 | 34 |
telencephalon | 5.73e-08 | 34 |
occipital lobe | 5.38e-07 | 5 |
parietal lobe | 5.70e-07 | 5 |
brain | 5.93e-07 | 68 |
future brain | 5.93e-07 | 68 |
small intestine | 6.04e-07 | 4 |
sympathetic nervous system | 6.39e-07 | 5 |
autonomic nervous system | 6.39e-07 | 5 |
regional part of forebrain | 9.61e-07 | 41 |
forebrain | 9.61e-07 | 41 |
anterior neural tube | 9.61e-07 | 41 |
future forebrain | 9.61e-07 | 41 |