FFCP PHASE1:Hg19::chr9:131465132..131465146,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29941 | |EntrezGene=29941 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17999 | |HGNC=17999 | ||
|TSSclassifier=strong | |||
|UniProt=Q6P5Z2 | |UniProt=Q6P5Z2 | ||
|association_with_transcript=330bp_to_ENST00000291906,NM_013355,uc004bvw.2,uc010myh.2_5end | |association_with_transcript=330bp_to_ENST00000291906,NM_013355,uc004bvw.2,uc010myh.2_5end | ||
|cluster_id=chr9:131465132..131465146,+ | |||
|description=CAGE_peak_2_at_PKN3_5end | |description=CAGE_peak_2_at_PKN3_5end | ||
|id=chr9:131465132..131465146,+ | |id=chr9:131465132..131465146,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.36e-14!254;CL:0000115!6.88e-13!35;CL:0002078!7.41e-13!44;CL:0002139!2.39e-11!24;CL:0000071!4.65e-10!18;CL:0002546!4.65e-10!18;CL:0000213!2.08e-09!57;CL:0000215!2.08e-09!57;CL:1000497!2.48e-08!18;CL:0002518!2.48e-08!18;CL:1000449!4.89e-08!16;CL:0002321!2.56e-07!248;CL:0000220!6.90e-07!246 | |ontology_enrichment_celltype=CL:0000066!3.36e-14!254;CL:0000115!6.88e-13!35;CL:0002078!7.41e-13!44;CL:0002139!2.39e-11!24;CL:0000071!4.65e-10!18;CL:0002546!4.65e-10!18;CL:0000213!2.08e-09!57;CL:0000215!2.08e-09!57;CL:1000497!2.48e-08!18;CL:0002518!2.48e-08!18;CL:1000449!4.89e-08!16;CL:0002321!2.56e-07!248;CL:0000220!6.90e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0000071;6.01e-19;18!CL:0000115;9.95e-18;36!CL:0002139;5.72e-17;24!CL:1000449;3.10e-13;15!CL:0002078;6.49e-13;45!CL:1000497;2.55e-11;17!CL:0002518;2.55e-11;17!CL:0002681;4.08e-11;12!CL:0002584;4.08e-11;12!CL:0002543;7.68e-11;6!CL:0000213;7.13e-09;58!CL:0000215;7.13e-09;58!CL:1000413;1.01e-08;9!CL:1000507;1.69e-08;10!CL:1000494;1.69e-08;10!CL:0002544;1.57e-07;6!CL:1000746;9.10e-07;7!CL:1000612;9.10e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.41e-22,36;CL:0002078,1.46e-21,45;CL:0000071,2.86e-19,18;CL:0002546,2.86e-19,18;CL:0002139,7.10e-17,24;CL:0000213,1.65e-13,58;CL:0000215,1.65e-13,58;CL:1000449,3.38e-13,15;CL:1000497,2.75e-11,17;CL:0002518,2.75e-11,17;CL:0002543,3.25e-11,6;CL:0002681,4.40e-11,12;CL:0002584,4.40e-11,12;CL:0000066,3.07e-10,253;CL:1000413,1.24e-08,9;CL:1000507,2.11e-08,10;CL:1000494,2.11e-08,10;CL:0002544,1.83e-07,6;CL:1000746,9.17e-07,7;CL:1000612,9.17e-07,7 | |||
|ontology_enrichment_development_v019=CL:0002546;6.01e-19;18 | |||
|ontology_enrichment_disease=DOID:162!5.02e-08!235;DOID:14566!1.60e-07!239;DOID:0050687!4.30e-07!143 | |ontology_enrichment_disease=DOID:162!5.02e-08!235;DOID:14566!1.60e-07!239;DOID:0050687!4.30e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:8692;3.86e-07;31!DOID:3095;7.22e-07;22!DOID:2994;7.22e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,7.58e-07,31;DOID:3095,7.61e-07,22;DOID:2994,7.61e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000487!4.42e-10!22;UBERON:0001986!4.65e-10!18;UBERON:0004638!4.65e-10!18;UBERON:0004852!4.65e-10!18;UBERON:0006914!9.23e-09!25;UBERON:0005172!1.49e-08!55;UBERON:0005173!1.49e-08!55;UBERON:0002113!1.53e-08!27;UBERON:0003918!1.53e-08!27;UBERON:0005095!1.53e-08!27;UBERON:0007687!1.53e-08!27;UBERON:0005177!2.90e-08!107;UBERON:0000489!3.37e-08!32;UBERON:0004211!4.89e-08!16;UBERON:0001285!4.89e-08!16;UBERON:0007684!4.89e-08!16;UBERON:0003220!4.89e-08!16;UBERON:0004208!4.89e-08!16;UBERON:0003914!7.54e-08!118;UBERON:0000477!1.25e-07!286;UBERON:0006555!3.96e-07!17;UBERON:0005103!3.96e-07!17;UBERON:0000083!3.96e-07!17;UBERON:0009201!3.96e-07!17;UBERON:0004819!3.96e-07!17;UBERON:0006553!3.96e-07!17;UBERON:0003074!3.96e-07!17;UBERON:0003060!3.96e-07!17;UBERON:0000025!7.67e-07!194 | |ontology_enrichment_uberon=UBERON:0000487!4.42e-10!22;UBERON:0001986!4.65e-10!18;UBERON:0004638!4.65e-10!18;UBERON:0004852!4.65e-10!18;UBERON:0006914!9.23e-09!25;UBERON:0005172!1.49e-08!55;UBERON:0005173!1.49e-08!55;UBERON:0002113!1.53e-08!27;UBERON:0003918!1.53e-08!27;UBERON:0005095!1.53e-08!27;UBERON:0007687!1.53e-08!27;UBERON:0005177!2.90e-08!107;UBERON:0000489!3.37e-08!32;UBERON:0004211!4.89e-08!16;UBERON:0001285!4.89e-08!16;UBERON:0007684!4.89e-08!16;UBERON:0003220!4.89e-08!16;UBERON:0004208!4.89e-08!16;UBERON:0003914!7.54e-08!118;UBERON:0000477!1.25e-07!286;UBERON:0006555!3.96e-07!17;UBERON:0005103!3.96e-07!17;UBERON:0000083!3.96e-07!17;UBERON:0009201!3.96e-07!17;UBERON:0004819!3.96e-07!17;UBERON:0006553!3.96e-07!17;UBERON:0003074!3.96e-07!17;UBERON:0003060!3.96e-07!17;UBERON:0000025!7.67e-07!194 | ||
|ontology_enrichment_uberon_v019=UBERON:0000487;5.57e-19;22!UBERON:0004638;6.01e-19;18!UBERON:0001986;6.01e-19;18!UBERON:0004852;6.01e-19;18!UBERON:0006914;4.37e-16;25!UBERON:0006555;3.10e-13;15!UBERON:0004819;3.10e-13;15!UBERON:0001285;3.10e-13;15!UBERON:0007684;3.10e-13;15!UBERON:0000490;1.15e-12;33!UBERON:0001225;4.08e-11;12!UBERON:0008987;4.08e-11;12!UBERON:0000353;1.35e-10;15!UBERON:0002113;3.35e-10;24!UBERON:0011143;3.35e-10;24!UBERON:0003915;1.01e-08;9!UBERON:0004700;1.01e-08;9!UBERON:0001917;1.01e-08;9!UBERON:0004211;1.69e-08;10!UBERON:0009773;1.69e-08;10!UBERON:0001231;1.69e-08;10!UBERON:0004810;1.69e-08;10!UBERON:0001851;1.86e-08;15!UBERON:0000489;7.70e-08;29!UBERON:0006554;1.82e-07;30!UBERON:0001008;1.82e-07;30!UBERON:0003914;3.11e-07;74!UBERON:0001638;6.94e-07;9!UBERON:0003920;6.94e-07;9!UBERON:0004582;6.94e-07;9!UBERON:0000074;9.10e-07;7!UBERON:0001229;9.10e-07;7 | |||
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| ||
|short_description=p2@PKN3 | |short_description=p2@PKN3 | ||
}} | }} |
Latest revision as of 20:39, 15 September 2015
Short description: | p2@PKN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PKN3_5end |
Coexpression cluster: | NA |
Association with transcript: | 330bp_to_ENST00000291906, NM_013355, uc004bvw.2, uc010myh.2_5end |
EntrezGene: | PKN3 |
HGNC: | 17999 |
UniProt: | Q6P5Z2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.41e-22 | 36 |
meso-epithelial cell | 1.46e-21 | 45 |
blood vessel endothelial cell | 2.86e-19 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.86e-19 | 18 |
endothelial cell of vascular tree | 7.10e-17 | 24 |
lining cell | 1.65e-13 | 58 |
barrier cell | 1.65e-13 | 58 |
epithelial cell of nephron | 3.38e-13 | 15 |
kidney cell | 2.75e-11 | 17 |
kidney epithelial cell | 2.75e-11 | 17 |
vein endothelial cell | 3.25e-11 | 6 |
kidney cortical cell | 4.40e-11 | 12 |
renal cortical epithelial cell | 4.40e-11 | 12 |
epithelial cell | 3.07e-10 | 253 |
endothelial cell of artery | 1.24e-08 | 9 |
kidney tubule cell | 2.11e-08 | 10 |
nephron tubule epithelial cell | 2.11e-08 | 10 |
aortic endothelial cell | 1.83e-07 | 6 |
glomerular cell | 9.17e-07 | 7 |
kidney corpuscule cell | 9.17e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.58e-07 | 31 |
germ cell and embryonal cancer | 7.61e-07 | 22 |
germ cell cancer | 7.61e-07 | 22 |