FFCP PHASE1:Hg19::chr12:91451725..91451736,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11081 | |EntrezGene=11081 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6309 | |HGNC=6309 | ||
|TSSclassifier=strong | |||
|UniProt=O60938 | |UniProt=O60938 | ||
|association_with_transcript=23bp_to_ENST00000266719_5end | |association_with_transcript=23bp_to_ENST00000266719_5end | ||
|cluster_id=chr12:91451725..91451736,- | |||
|coexpression_cluster_id=C1691 | |coexpression_cluster_id=C1691 | ||
|description=CAGE_peak_4_at_KERA_5end | |description=CAGE_peak_4_at_KERA_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000214;8.31e-09;3 | |ontology_enrichment_celltype_v019=CL:0000214;8.31e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000214,8.31e-09,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;7.07e-07;4 | |ontology_enrichment_disease_v019=DOID:5409;7.07e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5409,7.27e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000341!5.20e-21!2;UBERON:0007029!1.45e-11!1;UBERON:0002426!2.18e-11!1;UBERON:0003831!2.18e-11!1;UBERON:0003898!2.18e-11!1;UBERON:0004830!2.18e-11!1;UBERON:0001774!2.18e-11!1;UBERON:0003830!2.18e-11!1;UBERON:0005175!2.18e-11!1;UBERON:0003897!2.18e-11!1;UBERON:0001103!2.18e-11!1;UBERON:0010084!2.18e-11!1;UBERON:0000989!2.42e-11!1;UBERON:0008811!2.42e-11!1;UBERON:0006258!2.42e-11!1;UBERON:0005876!2.42e-11!1;UBERON:0004874!2.42e-11!1;UBERON:0001154!2.68e-11!1;UBERON:0001153!2.68e-11!1;UBERON:0001301!3.63e-11!1;UBERON:0005181!4.76e-07!35 | |ontology_enrichment_uberon=UBERON:0000341!5.20e-21!2;UBERON:0007029!1.45e-11!1;UBERON:0002426!2.18e-11!1;UBERON:0003831!2.18e-11!1;UBERON:0003898!2.18e-11!1;UBERON:0004830!2.18e-11!1;UBERON:0001774!2.18e-11!1;UBERON:0003830!2.18e-11!1;UBERON:0005175!2.18e-11!1;UBERON:0003897!2.18e-11!1;UBERON:0001103!2.18e-11!1;UBERON:0010084!2.18e-11!1;UBERON:0000989!2.42e-11!1;UBERON:0008811!2.42e-11!1;UBERON:0006258!2.42e-11!1;UBERON:0005876!2.42e-11!1;UBERON:0004874!2.42e-11!1;UBERON:0001154!2.68e-11!1;UBERON:0001153!2.68e-11!1;UBERON:0001301!3.63e-11!1;UBERON:0005181!4.76e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0007029;4.59e-23;1!UBERON:0003127;2.19e-12;2!UBERON:0000341;3.06e-12;2!UBERON:0006915;8.31e-09;3!UBERON:0007616;8.31e-09;3!UBERON:0002217;8.31e-09;3!UBERON:0002018;8.31e-09;3!UBERON:0001723;1.35e-08;3!UBERON:0001033;1.35e-08;3!UBERON:0000922;1.80e-07;49!UBERON:0000014;9.36e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0007029;4.59e-23;1!UBERON:0003127;2.19e-12;2!UBERON:0000341;3.06e-12;2!UBERON:0006915;8.31e-09;3!UBERON:0007616;8.31e-09;3!UBERON:0002217;8.31e-09;3!UBERON:0002018;8.31e-09;3!UBERON:0001723;1.35e-08;3!UBERON:0001033;1.35e-08;3!UBERON:0000922;1.80e-07;49!UBERON:0000014;9.36e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,3.28e-23,1;UBERON:0003127,2.07e-12,2;UBERON:0000341,2.90e-12,2;UBERON:0006915,8.31e-09,3;UBERON:0007616,8.31e-09,3;UBERON:0002217,8.31e-09,3;UBERON:0002018,8.31e-09,3;UBERON:0001723,1.40e-08,3;UBERON:0001033,1.40e-08,3;UBERON:0010056,1.40e-08,3;UBERON:0000014,8.61e-07,4 | |||
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|short_description=p4@KERA | |short_description=p4@KERA | ||
}} | }} |
Latest revision as of 20:54, 15 September 2015
Short description: | p4@KERA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KERA_5end |
Coexpression cluster: | C1691_eye_trachea_synovial_gastric_skeletal_throat_tongue |
Association with transcript: | 23bp_to_ENST00000266719_5end |
EntrezGene: | KERA |
HGNC: | 6309 |
UniProt: | O60938 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 8.31e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
surface | 3.28e-23 | 1 |
open tracheal system trachea | 2.07e-12 | 2 |
throat | 2.90e-12 | 2 |
stratified squamous epithelium | 8.31e-09 | 3 |
layer of synovial tissue | 8.31e-09 | 3 |
synovial joint | 8.31e-09 | 3 |
synovial membrane of synovial joint | 8.31e-09 | 3 |
tongue | 1.40e-08 | 3 |
gustatory system | 1.40e-08 | 3 |
future tongue | 1.40e-08 | 3 |
zone of skin | 8.61e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 7.27e-07 | 4 |