FFCP PHASE1:Hg19::chr16:27226006..27226014,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79831 | |EntrezGene=79831 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25840 | |HGNC=25840 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=73bp_to_uc010bxx.2_5end | |association_with_transcript=73bp_to_uc010bxx.2_5end | ||
|cluster_id=chr16:27226006..27226014,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_10_at_JMJD5_5end | |description=CAGE_peak_10_at_JMJD5_5end | ||
|id=chr16:27226006..27226014,+ | |id=chr16:27226006..27226014,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.06e-15!12;CL:0000417!1.06e-15!12;CL:0000668!1.06e-15!12;CL:0000414!1.06e-15!12;CL:0000412!1.06e-15!12;CL:0000182!1.06e-15!12 | |ontology_enrichment_celltype=CL:0000181!1.06e-15!12;CL:0000417!1.06e-15!12;CL:0000668!1.06e-15!12;CL:0000414!1.06e-15!12;CL:0000412!1.06e-15!12;CL:0000182!1.06e-15!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.81e-25;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.81e-25,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.69e-17!19;UBERON:0006925!2.69e-17!19;UBERON:0008836!2.69e-17!19;UBERON:0008835!5.37e-15!22;UBERON:0003894!5.37e-15!22;UBERON:0009854!2.31e-14!23;UBERON:0007499!3.03e-13!25;UBERON:0009497!3.03e-13!25;UBERON:0000015!3.03e-13!25;UBERON:0002423!3.03e-13!25;UBERON:0006235!3.03e-13!25;UBERON:0004161!3.03e-13!25;UBERON:0005057!9.45e-13!26;UBERON:0009856!9.45e-13!26;UBERON:0002365!9.40e-11!31;UBERON:0002330!9.40e-11!31;UBERON:0002368!1.46e-09!35;UBERON:0003929!2.23e-09!54;UBERON:0000949!1.67e-07!45;UBERON:0004921!3.00e-07!129;UBERON:0004185!3.00e-07!129;UBERON:0000160!5.94e-07!27 | |ontology_enrichment_uberon=UBERON:0002107!2.69e-17!19;UBERON:0006925!2.69e-17!19;UBERON:0008836!2.69e-17!19;UBERON:0008835!5.37e-15!22;UBERON:0003894!5.37e-15!22;UBERON:0009854!2.31e-14!23;UBERON:0007499!3.03e-13!25;UBERON:0009497!3.03e-13!25;UBERON:0000015!3.03e-13!25;UBERON:0002423!3.03e-13!25;UBERON:0006235!3.03e-13!25;UBERON:0004161!3.03e-13!25;UBERON:0005057!9.45e-13!26;UBERON:0009856!9.45e-13!26;UBERON:0002365!9.40e-11!31;UBERON:0002330!9.40e-11!31;UBERON:0002368!1.46e-09!35;UBERON:0003929!2.23e-09!54;UBERON:0000949!1.67e-07!45;UBERON:0004921!3.00e-07!129;UBERON:0004185!3.00e-07!129;UBERON:0000160!5.94e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.32e-28;19!UBERON:0006925;2.32e-28;19!UBERON:0002423;9.78e-22;25!UBERON:0002365;3.13e-18;31!UBERON:0002330;3.13e-18;31!UBERON:0002368;1.11e-14;33!UBERON:0000949;2.50e-12;43!UBERON:0005172;4.23e-09;52!UBERON:0005173;4.23e-09;52!UBERON:0001007;1.23e-08;81!UBERON:0002108;7.25e-08;4!UBERON:0002530;7.18e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.32e-28,19;UBERON:0006925,2.32e-28,19;UBERON:0008836,2.32e-28,19;UBERON:0008835,1.34e-24,22;UBERON:0003894,1.34e-24,22;UBERON:0009854,1.46e-23,23;UBERON:0007499,9.78e-22,25;UBERON:0009497,9.78e-22,25;UBERON:0000015,9.78e-22,25;UBERON:0002423,9.78e-22,25;UBERON:0006235,9.78e-22,25;UBERON:0004161,9.78e-22,25;UBERON:0009856,6.29e-21,26;UBERON:0002365,1.15e-17,31;UBERON:0002330,1.15e-17,31;UBERON:0002368,1.01e-15,35;UBERON:0000949,2.30e-12,45;UBERON:0003929,2.12e-10,54;UBERON:0005172,2.12e-10,54;UBERON:0005173,2.12e-10,54;UBERON:0002530,1.45e-09,59;UBERON:0002417,2.06e-09,60;UBERON:0000916,2.06e-09,60;UBERON:0002108,7.01e-08,4;UBERON:0004921,2.19e-07,118;UBERON:0005911,5.11e-07,82 | |||
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|short_description=p10@JMJD5 | |short_description=p10@JMJD5 | ||
}} | }} |
Latest revision as of 21:09, 15 September 2015
Short description: | p10@JMJD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_JMJD5_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 73bp_to_uc010bxx.2_5end |
EntrezGene: | JMJD5 |
HGNC: | 25840 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.81e-25 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.32e-28 | 19 |
digestive gland | 2.32e-28 | 19 |
liver bud | 2.32e-28 | 19 |
hepatic diverticulum | 1.34e-24 | 22 |
liver primordium | 1.34e-24 | 22 |
digestive tract diverticulum | 1.46e-23 | 23 |
epithelial sac | 9.78e-22 | 25 |
epithelium of foregut-midgut junction | 9.78e-22 | 25 |
anatomical boundary | 9.78e-22 | 25 |
hepatobiliary system | 9.78e-22 | 25 |
foregut-midgut junction | 9.78e-22 | 25 |
septum transversum | 9.78e-22 | 25 |
sac | 6.29e-21 | 26 |
exocrine gland | 1.15e-17 | 31 |
exocrine system | 1.15e-17 | 31 |
endocrine gland | 1.01e-15 | 35 |
endocrine system | 2.30e-12 | 45 |
gut epithelium | 2.12e-10 | 54 |
abdomen element | 2.12e-10 | 54 |
abdominal segment element | 2.12e-10 | 54 |
gland | 1.45e-09 | 59 |
abdominal segment of trunk | 2.06e-09 | 60 |
abdomen | 2.06e-09 | 60 |
small intestine | 7.01e-08 | 4 |
subdivision of digestive tract | 2.19e-07 | 118 |
endo-epithelium | 5.11e-07 | 82 |