FFCP PHASE1:Hg19::chr19:12946215..12946224,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83546 | |EntrezGene=83546 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30310 | |HGNC=30310 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BSG5,Q8N210 | |UniProt=Q9BSG5,Q8N210 | ||
|association_with_transcript=5bp_to_ENST00000322912,NM_031429,uc002mvh.1,uc002mvj.2_5end | |association_with_transcript=5bp_to_ENST00000322912,NM_031429,uc002mvh.1,uc002mvj.2_5end | ||
|cluster_id=chr19:12946215..12946224,- | |||
|coexpression_cluster_id=C28 | |coexpression_cluster_id=C28 | ||
|description=CAGE_peak_10_at_RTBDN_5end | |description=CAGE_peak_10_at_RTBDN_5end | ||
|id=chr19:12946215..12946224,- | |id=chr19:12946215..12946224,- | ||
|ontology_enrichment_celltype=CL:0002322!9.01e-09!5 | |ontology_enrichment_celltype=CL:0002322!9.01e-09!5 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!1.65e-12!20;UBERON:0000200!3.12e-12!6;UBERON:0002619!2.58e-11!22;UBERON:0001049!2.38e-10!57;UBERON:0005068!2.38e-10!57;UBERON:0006241!2.38e-10!57;UBERON:0007135!2.38e-10!57;UBERON:0001017!2.48e-10!82;UBERON:0002616!6.46e-10!59;UBERON:0000956!7.22e-10!25;UBERON:0000203!7.22e-10!25;UBERON:0005743!1.05e-09!86;UBERON:0001869!1.63e-09!32;UBERON:0000955!1.84e-09!69;UBERON:0006238!1.84e-09!69;UBERON:0001871!1.93e-09!7;UBERON:0001893!6.95e-09!34;UBERON:0002020!7.09e-09!34;UBERON:0003528!7.09e-09!34;UBERON:0000073!1.72e-08!94;UBERON:0001016!1.72e-08!94;UBERON:0003075!2.19e-08!86;UBERON:0007284!2.19e-08!86;UBERON:0002346!7.00e-08!90;UBERON:0002791!2.92e-07!33;UBERON:0002780!3.72e-07!41;UBERON:0001890!3.72e-07!41;UBERON:0006240!3.72e-07!41;UBERON:0009722!4.09e-07!11;UBERON:0007690!4.09e-07!11;UBERON:0002771!4.13e-07!3;UBERON:0003080!5.91e-07!42;UBERON:0000988!9.34e-07!3 | |ontology_enrichment_uberon=UBERON:0001950!1.65e-12!20;UBERON:0000200!3.12e-12!6;UBERON:0002619!2.58e-11!22;UBERON:0001049!2.38e-10!57;UBERON:0005068!2.38e-10!57;UBERON:0006241!2.38e-10!57;UBERON:0007135!2.38e-10!57;UBERON:0001017!2.48e-10!82;UBERON:0002616!6.46e-10!59;UBERON:0000956!7.22e-10!25;UBERON:0000203!7.22e-10!25;UBERON:0005743!1.05e-09!86;UBERON:0001869!1.63e-09!32;UBERON:0000955!1.84e-09!69;UBERON:0006238!1.84e-09!69;UBERON:0001871!1.93e-09!7;UBERON:0001893!6.95e-09!34;UBERON:0002020!7.09e-09!34;UBERON:0003528!7.09e-09!34;UBERON:0000073!1.72e-08!94;UBERON:0001016!1.72e-08!94;UBERON:0003075!2.19e-08!86;UBERON:0007284!2.19e-08!86;UBERON:0002346!7.00e-08!90;UBERON:0002791!2.92e-07!33;UBERON:0002780!3.72e-07!41;UBERON:0001890!3.72e-07!41;UBERON:0006240!3.72e-07!41;UBERON:0009722!4.09e-07!11;UBERON:0007690!4.09e-07!11;UBERON:0002771!4.13e-07!3;UBERON:0003080!5.91e-07!42;UBERON:0000988!9.34e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.74e-50;2!UBERON:0005058;2.74e-50;2!UBERON:0009113;2.74e-50;2!UBERON:0004177;4.21e-21;5!UBERON:0005057;4.21e-21;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.56e-26,4;UBERON:0005058,5.56e-26,4;UBERON:0009113,5.56e-26,4;UBERON:0003295,5.56e-26,4;UBERON:0005562,5.56e-26,4;UBERON:0003351,7.67e-18,6;UBERON:0004177,1.65e-15,7;UBERON:0005057,1.65e-15,7;UBERON:0000974,2.73e-11,10;UBERON:0003408,2.73e-11,10;UBERON:0001042,2.73e-11,10;UBERON:0009145,2.73e-11,10;UBERON:0006562,2.16e-10,11;UBERON:0009722,2.16e-10,11;UBERON:0007690,2.16e-10,11;UBERON:0008814,7.18e-07,18 | |||
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| ||
|short_description=p10@RTBDN | |short_description=p10@RTBDN | ||
}} | }} |
Latest revision as of 21:36, 15 September 2015
Short description: | p10@RTBDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RTBDN_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 5bp_to_ENST00000322912, NM_031429, uc002mvh.1, uc002mvj.2_5end |
EntrezGene: | RTBDN |
HGNC: | 30310 |
UniProt: | Q9BSG5Q8N210 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 5.56e-26 | 4 |
hemolymphoid system gland | 5.56e-26 | 4 |
thymic region | 5.56e-26 | 4 |
pharyngeal gland | 5.56e-26 | 4 |
thymus primordium | 5.56e-26 | 4 |
pharyngeal epithelium | 7.67e-18 | 6 |
hemopoietic organ | 1.65e-15 | 7 |
immune organ | 1.65e-15 | 7 |
neck | 2.73e-11 | 10 |
gland of gut | 2.73e-11 | 10 |
chordate pharynx | 2.73e-11 | 10 |
pharyngeal region of foregut | 2.73e-11 | 10 |
pharynx | 2.16e-10 | 11 |
entire pharyngeal arch endoderm | 2.16e-10 | 11 |
early pharyngeal endoderm | 2.16e-10 | 11 |
pharyngeal arch system | 7.18e-07 | 18 |