FFCP PHASE2:Hg19::chr12:103835345..103835379,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:374470 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:24729 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=374470 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=24729 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 22:41, 15 September 2015
| Short description: | p1@C12orf42 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_C12orf42_5end |
| Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
| Association with transcript: | 0bp_to_ENST00000550650, ENST00000552977_5end |
| EntrezGene: | C12orf42 |
| HGNC: | 24729 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@C12orf42 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lymphocyte | 1.67e-60 | 53 |
| common lymphoid progenitor | 1.67e-60 | 53 |
| lymphoid lineage restricted progenitor cell | 2.62e-58 | 52 |
| mature alpha-beta T cell | 6.36e-32 | 18 |
| alpha-beta T cell | 6.36e-32 | 18 |
| immature T cell | 6.36e-32 | 18 |
| mature T cell | 6.36e-32 | 18 |
| immature alpha-beta T cell | 6.36e-32 | 18 |
| B cell | 2.35e-31 | 14 |
| nongranular leukocyte | 5.19e-29 | 115 |
Showing 1 to 10 of 27 entries
| Ontology term | p-value | n |
|---|---|---|
| blood | 4.53e-20 | 15 |
| haemolymphatic fluid | 4.53e-20 | 15 |
| organism substance | 4.53e-20 | 15 |
| hemopoietic organ | 7.21e-09 | 7 |
| immune organ | 7.21e-09 | 7 |
| spleen | 2.31e-08 | 3 |
| gastrointestinal system mesentery | 2.31e-08 | 3 |
| stomach region | 2.31e-08 | 3 |
| mesentery | 2.31e-08 | 3 |
| gastrointestinal system serosa | 2.31e-08 | 3 |
Showing 1 to 10 of 16 entries
