FFCP PHASE1:Hg19::chr9:132427972..132428056,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51450 | |EntrezGene=51450 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21338 | |HGNC=21338 | ||
|TSSclassifier=strong | |||
|UniProt=Q99811 | |UniProt=Q99811 | ||
|association_with_transcript=52bp_to_ENST00000372469,NM_016307,uc004byh.2_5end | |association_with_transcript=52bp_to_ENST00000372469,NM_016307,uc004byh.2_5end | ||
|cluster_id=chr9:132427972..132428056,+ | |||
|description=CAGE_peak_1_at_PRRX2_5end | |description=CAGE_peak_1_at_PRRX2_5end | ||
|id=chr9:132427972..132428056,+ | |id=chr9:132427972..132428056,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.68e-32!180;CL:0000057!1.84e-23!75;CL:0002620!9.52e-12!23;CL:0000499!2.17e-08!27;CL:0002334!7.95e-08!12;CL:0000187!1.63e-07!54;CL:0000680!2.02e-07!57;CL:0000056!2.02e-07!57;CL:0000355!2.02e-07!57;CL:0000183!2.36e-07!59;CL:0000192!9.06e-07!42;CL:0000514!9.06e-07!42;CL:0000393!9.54e-07!60;CL:0000211!9.54e-07!60 | |ontology_enrichment_celltype=CL:0000055!2.68e-32!180;CL:0000057!1.84e-23!75;CL:0002620!9.52e-12!23;CL:0000499!2.17e-08!27;CL:0002334!7.95e-08!12;CL:0000187!1.63e-07!54;CL:0000680!2.02e-07!57;CL:0000056!2.02e-07!57;CL:0000355!2.02e-07!57;CL:0000183!2.36e-07!59;CL:0000192!9.06e-07!42;CL:0000514!9.06e-07!42;CL:0000393!9.54e-07!60;CL:0000211!9.54e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.67e-13;23!CL:0000057;2.43e-09;73!CL:0002334;2.91e-09;12!CL:0000499;8.80e-08;28!CL:0000153;1.68e-07;9!CL:0000447;1.68e-07;9!CL:0000062;2.08e-07;9!CL:0002320;9.86e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.02e-24,76;CL:0002620,1.82e-13,23;CL:0002334,3.09e-09,12;CL:0000499,1.15e-07,28;CL:0000153,1.75e-07,9;CL:0000447,1.75e-07,9;CL:0000062,7.69e-07,11;CL:0000375,7.69e-07,11;CL:0000335,7.69e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000335;7.86e-07;11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!3.85e-15!95;UBERON:0000914!2.40e-14!83;UBERON:0002329!2.40e-14!83;UBERON:0003077!2.40e-14!83;UBERON:0003059!2.40e-14!83;UBERON:0007282!2.40e-14!83;UBERON:0009618!2.40e-14!83;UBERON:0007285!2.40e-14!83;UBERON:0004290!1.23e-11!70;UBERON:0002199!1.15e-10!45;UBERON:0002416!1.15e-10!45;UBERON:0000486!1.34e-10!82;UBERON:0002100!3.77e-09!216;UBERON:0003104!4.71e-09!238;UBERON:0009142!4.71e-09!238;UBERON:0002097!4.74e-09!40;UBERON:0002385!1.87e-08!63;UBERON:0001015!1.87e-08!63;UBERON:0000383!1.87e-08!63;UBERON:0000475!2.17e-08!365;UBERON:0001134!2.88e-08!61;UBERON:0002036!2.88e-08!61;UBERON:0003082!2.88e-08!61;UBERON:0005256!3.77e-08!143;UBERON:0000468!1.04e-07!659;UBERON:0000481!4.94e-07!347 | |ontology_enrichment_uberon=UBERON:0003102!3.85e-15!95;UBERON:0000914!2.40e-14!83;UBERON:0002329!2.40e-14!83;UBERON:0003077!2.40e-14!83;UBERON:0003059!2.40e-14!83;UBERON:0007282!2.40e-14!83;UBERON:0009618!2.40e-14!83;UBERON:0007285!2.40e-14!83;UBERON:0004290!1.23e-11!70;UBERON:0002199!1.15e-10!45;UBERON:0002416!1.15e-10!45;UBERON:0000486!1.34e-10!82;UBERON:0002100!3.77e-09!216;UBERON:0003104!4.71e-09!238;UBERON:0009142!4.71e-09!238;UBERON:0002097!4.74e-09!40;UBERON:0002385!1.87e-08!63;UBERON:0001015!1.87e-08!63;UBERON:0000383!1.87e-08!63;UBERON:0000475!2.17e-08!365;UBERON:0001134!2.88e-08!61;UBERON:0002036!2.88e-08!61;UBERON:0003082!2.88e-08!61;UBERON:0005256!3.77e-08!143;UBERON:0000468!1.04e-07!659;UBERON:0000481!4.94e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0002199;1.83e-08;46!UBERON:0002416;1.83e-08;46!UBERON:0001434;3.05e-08;36!UBERON:0002097;3.76e-08;41!UBERON:0003102;1.31e-07;50!UBERON:0002384;1.87e-07;198!UBERON:0004457;3.35e-07;9!UBERON:0000042;3.35e-07;9!UBERON:0004905;4.61e-07;8!UBERON:0000982;4.61e-07;8!UBERON:0004770;4.61e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,6.56e-14,99;UBERON:0002199,1.64e-12,46;UBERON:0002416,1.64e-12,46;UBERON:0002097,1.50e-10,41;UBERON:0007524,1.61e-10,73;UBERON:0002329,2.48e-10,71;UBERON:0003059,2.48e-10,71;UBERON:0007282,2.48e-10,71;UBERON:0004290,2.48e-10,71;UBERON:0009618,2.48e-10,71;UBERON:0003077,5.68e-10,72;UBERON:0007285,5.68e-10,72;UBERON:0007503,1.04e-09,78;UBERON:0000486,2.12e-09,83;UBERON:0004905,4.80e-07,8;UBERON:0000982,4.80e-07,8;UBERON:0004770,4.80e-07,8;UBERON:0001134,9.46e-07,62;UBERON:0002036,9.46e-07,62;UBERON:0003082,9.46e-07,62 | |||
|phase1_expression=27.4334352698541,17.5562429590606,10.8534891153898,32.0234554730017,6.70441641640932,3.48935409640147,2.53299878168311,4.42203911398782,6.00726944859629,0.982935746006035,0,0,0,24.010672474249,16.2384714106679,1.34465029290355,0,0,0,2.09305798730539,5.91602004608334,0.313454721478088,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22465726229299,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.68152568894461,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,7.31420598941885,1.34140171940727,3.06870148424473,54.9387511624541,71.1899833102963,49.5375094846017,7.95285947051099,27.2515527369476,0.0945348171640679,0.221729397462564,0.175669571386252,1.83370705696798,0,0,0.324547393654683,0.522389211897802,0.664789802594326,0,0,0,0,3.4409383804245,0,0,0,0,0,0,0,0,1.61131726843659,0.760272105718513,0.976248230192678,0,0,0.446498641420399,0.898117490504679,1.91439516821648,0,0,0.183201743930407,0,0,0.436094052142534,23.35768172968,10.0038104215018,1.45650098894541,5.16305917347865,17.0240823455211,11.2135520028461,0,0.74000264525148,1.24484414159907,0,0.490385709340376,0.454072282934794,0.576175924479999,20.1516431377065,15.2958437646857,10.8389646093445,29.291941388153,5.98915943083201,4.69431538667581,4.77532742787645,16.3323337003915,13.1432719523592,36.577326536221,73.6561771514873,89.263361469559,1.82032272387605,2.15585442544872,13.9718974581875,13.2625631064282,9.6972440419464,71.1143745826957,87.9619973943186,76.1706958656446,0.680593098960126,18.8359117473305,32.6742804892408,34.332967987849,22.8069233024146,36.6867004088842,11.8514648420989,40.2012409676234,18.0590675498155,62.1648092928447,18.4276655198204,32.8618138153009,62.3953779320614,17.3954700333141,47.2527340687633,65.7895098164692,0,0.272746120590835,0,2.07355300420312,2.51806559810822,4.18298194330266,2.28054321033815,3.02785021050754,5.10968302706162,50.0638503455411,42.4539019207304,71.8301591032899,16.2528774811193,7.94067429836544,2.48444280083672,1.85443159085912,1.68707720918437,1.54411561825352,2.83243277320128,1.66089433377768,2.02246962240247,1.76599318612811,0.769494313892781,0,0,0.8231480226628,2.94017422771084,0,0,0,0,0.245976877086227,11.8381789105983,0,0,0.100528972411631,0.0925884451585296,23.7840062876537,13.5191522086345,0,0,1.17408694235822,0.577465791044295,0.925971025153221,0.380508304469197,0.790204397959275,0,0,0,0,0,0.16798212819886,0.283550194484773,0,0,0,3.94130590316755,0,1.24396869324463,0.432359860250884,0.37872730027914,0.698476837213859,0,0,3.4214489204541,0.925447434329912,0,0.285826432630578,0.897048674762886,1.30788020649984,0.80672114403045,1.68053230485111,35.7656445851882,0,1.86156681609409,1.04007436911366,15.9468572042528,15.6034045225606,12.5218424137567,0.285955987316295,0,0,0,0.355391948742546,0,0.602878754119172,1.74306691720059,0.499864955910285,0,0,0,9.34536936417172,27.5668646001873,0,0.723906533337896,1.02738161275192,0.179060963239896,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,34.7216921565166,48.016370021729,13.0207211375873,42.4260557522847,52.993409672757,38.9524965133819,31.1596163880617,19.8624425820294,43.2074257706371,45.5281513687022,19.2625423575277,18.9900243597954,24.4142956655313,0.783204629850962,3.0882908142977,0.206768026122887,0,0.106727557803444,0,0,3.93107381328584,22.3297027036899,22.2519861267691,53.6060780367171,11.148105985246,39.9131654272029,22.3586950389614,32.651974617898,12.1825658104098,31.9611105563629,10.758657437809,17.6546505922431,26.2635455319508,0,0.200506470303285,0,5.28146461557191,7.10155555226196,10.8833264416322,0,0,4.70609861506113,0,0.105551628892876,0,0,4.96606607034921,9.25363516141736,0.541892875087706,1.50506932156456,0.254876273045038,0,0.223874754722178,0,0,0.512900250232778,0.656029291399411,0,0.412164046590889,29.85164553078,21.4524699793529,0,1.95018073810956,1.6068392984416,6.38026740728005,3.54311819363682,3.22357716924872,0.689182862422653,0.107420244868274,0.580066775656914,0.767039646744908,2.67096106940212,0,0,0,0.10115778085555,20.4532041690806,2.83331112147576,20.2140808346574,27.1069550554958,1.06461206063404,20.0084588177267,7.59829298326072,1.86062352764589,0.744316738719335,0.949138274156178,0.571890581771475,10.2359116524534,5.56320684444097,52.5035359077796,17.2688700843831,0.719489830333259,0.274537029736055,1.29593642580255,1.81964233415984,11.0957224821106,0.421258456238981,9.26504104270222,20.7156466186592,12.6780176108107,12.5579918495347,1.97967604735198,57.6341394763238,70.5747639739039,21.230047207719,13.5919774428666,10.9967351510671,14.4296845450259,0,1.8589409885985,0.563391205064483,0.143411352204052,2.35797698431491,0,1.77380532035299,78.3209326954334,54.9922471243036,50.0904589370744,64.0380538048319,0.0962221127255121,2.68120910214315,1.08890984861323,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.2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|short_description=p1@PRRX2 | |short_description=p1@PRRX2 | ||
}} | }} |
Latest revision as of 23:12, 15 September 2015
Short description: | p1@PRRX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRRX2_5end |
Coexpression cluster: | NA |
Association with transcript: | 52bp_to_ENST00000372469, NM_016307, uc004byh.2_5end |
EntrezGene: | PRRX2 |
HGNC: | 21338 |
UniProt: | Q99811 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.02e-24 | 76 |
skin fibroblast | 1.82e-13 | 23 |
preadipocyte | 3.09e-09 | 12 |
stromal cell | 1.15e-07 | 28 |
GAG secreting cell | 1.75e-07 | 9 |
carbohydrate secreting cell | 1.75e-07 | 9 |
osteoblast | 7.69e-07 | 11 |
osteoprogenitor cell | 7.69e-07 | 11 |
mesenchyme condensation cell | 7.69e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
surface structure | 6.56e-14 | 99 |
integument | 1.64e-12 | 46 |
integumental system | 1.64e-12 | 46 |
skin of body | 1.50e-10 | 41 |
dense mesenchyme tissue | 1.61e-10 | 73 |
somite | 2.48e-10 | 71 |
presomitic mesoderm | 2.48e-10 | 71 |
presumptive segmental plate | 2.48e-10 | 71 |
dermomyotome | 2.48e-10 | 71 |
trunk paraxial mesoderm | 2.48e-10 | 71 |
paraxial mesoderm | 5.68e-10 | 72 |
presumptive paraxial mesoderm | 5.68e-10 | 72 |
epithelial vesicle | 1.04e-09 | 78 |
multilaminar epithelium | 2.12e-09 | 83 |
articulation | 4.80e-07 | 8 |
skeletal joint | 4.80e-07 | 8 |
articular system | 4.80e-07 | 8 |
skeletal muscle tissue | 9.46e-07 | 62 |
striated muscle tissue | 9.46e-07 | 62 |
myotome | 9.46e-07 | 62 |