FFCP PHASE1:Hg19::chr19:13227319..13227326,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55621 | |EntrezGene=55621 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25980 | |HGNC=25980 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NXH9 | |UniProt=Q9NXH9 | ||
|association_with_transcript=136bp_to_ENST00000221504,ENST00000437766,NM_001142554,NM_017722,uc002mwj.2,uc002mwk.2_5end | |association_with_transcript=136bp_to_ENST00000221504,ENST00000437766,NM_001142554,NM_017722,uc002mwj.2,uc002mwk.2_5end | ||
|cluster_id=chr19:13227319..13227326,- | |||
|description=CAGE_peak_6_at_TRMT1_5end | |description=CAGE_peak_6_at_TRMT1_5end | ||
|id=chr19:13227319..13227326,- | |id=chr19:13227319..13227326,- | ||
|ontology_enrichment_celltype=CL:0002321!4.07e-07!248;CL:0000220!7.65e-07!246 | |ontology_enrichment_celltype=CL:0002321!4.07e-07!248;CL:0000220!7.65e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0002548;1.32e-14;6!CL:0002494;2.67e-14;16!CL:0002592;4.83e-13;3!CL:0002581;2.07e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002548,1.52e-14,6;CL:0002494,2.40e-14,16;CL:0002592,3.16e-13,3;CL:0002581,1.57e-10,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003498;4.83e-13;3!UBERON:0005985;4.83e-13;3!UBERON:0001621;4.83e-13;3!UBERON:0000948;2.31e-10;22!UBERON:0007100;4.23e-09;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001621,3.16e-13,3;UBERON:0004872,1.55e-09,83;UBERON:0000948,1.62e-09,24;UBERON:0005498,1.62e-09,24;UBERON:0004140,1.62e-09,24;UBERON:0009881,1.62e-09,24;UBERON:0004141,1.62e-09,24;UBERON:0003084,1.62e-09,24;UBERON:0007005,1.62e-09,24;UBERON:0004139,1.62e-09,24;UBERON:0004291,1.62e-09,24;UBERON:0007100,1.93e-08,27;UBERON:0004535,2.09e-08,109;UBERON:0003498,2.73e-08,5;UBERON:0005985,2.73e-08,5;UBERON:0001009,3.90e-08,112;UBERON:0003914,9.62e-08,117;UBERON:0007500,7.42e-07,59;UBERON:0001981,7.42e-07,59;UBERON:0004537,7.42e-07,59;UBERON:0006965,7.42e-07,59 | |||
|phase1_expression=0.181678379270557,0,0,0,0.893922188854576,0,0,0.631719873426831,0,0.737201809504527,0,0,0,0.37129905888014,0,0,0,1.46062018077475,0,0.123121058076788,0.204000691244253,0,0,0.273748850145768,0.125542639594803,0.305653622991805,0,0.0787107813136792,0,0,0,0,0.6024118375565,0.369754010166788,0.154934401160603,0.142169232487422,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0.144846518960824,0,0,0.283604451492204,0.665188192387692,0.351339142772504,0.0654895377488563,0,0,0,0,0.26591592103773,0,0,0,0.79504962946682,0,0,1.13061588384802,0.838998872419812,0,0.208994966536811,0.775250277507987,0,0.33472061276467,0,0.760272105718513,0,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,1.53316637465883,0.949265659568129,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,0.926864265692532,0.286836620748814,0.354668382198357,2.24271040056923,2.1349799145941,1.2333377420858,0.311211035399766,0.134710672069688,0.163461903113459,0.151357427644931,0,0,1.87296046098192,0,0.448346041655403,0,0.161872944368132,0,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0.340296549480063,0.179389635688862,0.213557388818567,0,0.600182192168805,0.206105058476878,0,0,0,0.194874010322397,0,0.0920498986422993,0,0.355009592516614,0.302256294682921,0,0.193260853163297,0,0.573609190778008,0.365921118388786,0.132529768321485,0.348581828608555,0.310983165046111,0.756962552626885,0.36497735907583,0,0.643240938192885,0,0,0.721879481669586,0.591534000199219,0.505754070234305,0.723033089650446,0.441175890929576,0.217879444092406,0.474541238222193,0.404493924480493,0.784885860501384,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0,0,0.329250856225877,0,0.201057944823262,0.370353780634118,0.325808305310325,1.03993478527958,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0,1.58040879591855,0,0,0,0.148631162288728,0.93733833986777,0.839910640994298,0.425325291727159,0.179117045405697,0.581267877027924,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0.517086863031111,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,0.542621605391443,0.823240336780769,0.325736184293735,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.434343920002738,0.205476322550383,0,0.112085143993527,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0,0.178428988797162,0.157702415033935,0,0.300946099727719,0,0,0,0.737476674166813,0.0868836144680828,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0.160853921143607,1.48418066444991,0,0.532685175939381,0.410635780069046,0.519254429183621,0,0.120859449591622,0.601519410909855,0.184161977871793,0.34444334449382,0.910455840033585,0.262248829918848,0,0.15403067420883,0,0,0.527758144464379,0,0,0.431831832204279,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.330037999682352,0,0,0,0.290012154876366,0.154048617114644,0.460511024178389,0,0.107420244868274,0.145016693914229,0.255679882248303,0.178064071293475,0.165284915360978,0.192190067365106,0.382838137483752,0.2023155617111,0.929691098594572,0.62962469366128,0,0.924100740528266,0.532306030317022,0,0.9266210955196,0.858749320451947,0,0,0,0.255897791311334,0,0.95460974377781,0,0.539617372749944,0,0,1.41527737101321,1.58510321173008,0,0.48763373908959,0,0,0.136499911407986,0,0,0.551365343546124,0.66343897524122,0,0,0,0.608731130888112,0.6196469961995,0,0,0.0982490410131212,2.49669736036875,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.747768497892312,0,0,0,0.144269212976445,0.0711418433484141,0.478278818186467,0,0,0.635020748171649,0.324621940274555,0,0.228234679033192,0.313359791546046,0,0.50787533340481,0.1605880751037,0,0,0,0.921722292925374,0,0,0.19538809540204,0,0,0.811367035427949,0.33307196799782,0,0.18714054040822,0,0.121360521749513,0,0.284136146806413,0,0,0,0,0.562677665642051,0.111308705022906,0.16480387422676,0.63337622438398,0,0,0.251932747854276,0.306806047506464,0,0,0.179736702294654,0,0,0,0,0,0.969332746095218,0.463840490809256,0,0,0.0874599999961957,0,0,0.508507300585533,0.236387681767936,0,0,0.173624994933292,0,0.361789315876224,0,0.110579259931225,0,0,0.980446171670911,0.139423744278603,0,0.113942055847001,0,0.359030577639089,0.108647371922008,0,0,0,1.02193298195737,0.470940769185074,0,0.451191321234361,0,0.167821586975843,0,0.158936578980379,0,0,0,0,0,0,0,1.18608451472249,0.370691816839509,0.522109747527277,0,0,0,0.547364367646998,0,0.242780379534093,0,0,1.22429104652196,0.063186579628488,0.450970258243478,0.103688191397247,0,0.330991955875499,0,0,0,0.138674673013139,0.347119476670262,0.0979923974143777,0.0870592065804026,0,0.171986032471617,0.5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| ||
|short_description=p6@TRMT1 | |short_description=p6@TRMT1 | ||
}} | }} |
Latest revision as of 00:16, 16 September 2015
Short description: | p6@TRMT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TRMT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 136bp_to_ENST00000221504, ENST00000437766, NM_001142554, NM_017722, uc002mwj.2, uc002mwk.2_5end |
EntrezGene: | TRMT1 |
HGNC: | 25980 |
UniProt: | Q9NXH9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac fibroblast | 1.52e-14 | 6 |
cardiocyte | 2.40e-14 | 16 |
smooth muscle cell of the coronary artery | 3.16e-13 | 3 |
perirenal preadipocyte | 1.57e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
coronary artery | 3.16e-13 | 3 |
splanchnic layer of lateral plate mesoderm | 1.55e-09 | 83 |
heart | 1.62e-09 | 24 |
primitive heart tube | 1.62e-09 | 24 |
primary heart field | 1.62e-09 | 24 |
anterior lateral plate mesoderm | 1.62e-09 | 24 |
heart tube | 1.62e-09 | 24 |
heart primordium | 1.62e-09 | 24 |
cardiac mesoderm | 1.62e-09 | 24 |
cardiogenic plate | 1.62e-09 | 24 |
heart rudiment | 1.62e-09 | 24 |
primary circulatory organ | 1.93e-08 | 27 |
cardiovascular system | 2.09e-08 | 109 |
heart blood vessel | 2.73e-08 | 5 |
coronary vessel | 2.73e-08 | 5 |
circulatory system | 3.90e-08 | 112 |
epithelial tube | 9.62e-08 | 117 |
epithelial tube open at both ends | 7.42e-07 | 59 |
blood vessel | 7.42e-07 | 59 |
blood vasculature | 7.42e-07 | 59 |
vascular cord | 7.42e-07 | 59 |