FFCP PHASE1:Hg19::chr20:361975..361996,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57761 | |EntrezGene=57761 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16228 | |HGNC=16228 | ||
|TSSclassifier=strong | |||
|UniProt=Q96RU7 | |UniProt=Q96RU7 | ||
|association_with_transcript=34bp_to_ENST00000422053,ENST00000485293,uc002wdn.2_5end | |association_with_transcript=34bp_to_ENST00000422053,ENST00000485293,uc002wdn.2_5end | ||
|cluster_id=chr20:361975..361996,+ | |||
|coexpression_cluster_id=C2616 | |coexpression_cluster_id=C2616 | ||
|description=CAGE_peak_6_at_TRIB3_5end | |description=CAGE_peak_6_at_TRIB3_5end | ||
|id=chr20:361975..361996,+ | |id=chr20:361975..361996,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.57e-37!254;CL:0000223!8.59e-14!59;CL:0000548!3.09e-13!679;CL:0000004!3.09e-13!679;CL:0000255!3.09e-13!679;CL:0000063!8.53e-13!578;CL:0000012!1.43e-12!682;CL:0000220!3.14e-12!246;CL:0002321!1.03e-11!248;CL:0000076!5.46e-10!62;CL:0000003!1.23e-09!722;CL:0002076!1.37e-08!43 | |ontology_enrichment_celltype=CL:0000066!3.57e-37!254;CL:0000223!8.59e-14!59;CL:0000548!3.09e-13!679;CL:0000004!3.09e-13!679;CL:0000255!3.09e-13!679;CL:0000063!8.53e-13!578;CL:0000012!1.43e-12!682;CL:0000220!3.14e-12!246;CL:0002321!1.03e-11!248;CL:0000076!5.46e-10!62;CL:0000003!1.23e-09!722;CL:0002076!1.37e-08!43 | ||
|ontology_enrichment_celltype_v019=CL:0002076;8.80e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.66e-28,253;CL:0000223,1.44e-14,58;CL:0002076,9.26e-09,42;CL:0002321,3.22e-08,250;CL:0000076,4.78e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000223;2.79e-08;58 | |||
|ontology_enrichment_disease=DOID:0050687!1.80e-17!143;DOID:305!6.74e-17!106;DOID:162!6.87e-17!235;DOID:14566!1.91e-16!239;DOID:7!1.37e-07!39 | |ontology_enrichment_disease=DOID:0050687!1.80e-17!143;DOID:305!6.74e-17!106;DOID:162!6.87e-17!235;DOID:14566!1.91e-16!239;DOID:7!1.37e-07!39 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.25e-13,106;DOID:0050687,1.35e-11,143;DOID:14566,2.47e-08,239;DOID:162,3.28e-08,235;DOID:7,7.45e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.79e-11!169;UBERON:0000925!3.79e-11!169;UBERON:0006595!3.79e-11!169;UBERON:0000466!5.31e-10!126;UBERON:0005911!1.32e-09!82;UBERON:0000077!3.01e-09!130;UBERON:0001007!3.74e-09!155;UBERON:0001555!3.74e-09!155;UBERON:0007026!3.74e-09!155;UBERON:0001048!7.31e-09!168;UBERON:0001041!3.03e-08!98;UBERON:0002100!1.00e-07!216;UBERON:0009569!3.65e-07!113;UBERON:0004921!3.84e-07!129;UBERON:0004185!3.84e-07!129;UBERON:0000464!6.53e-07!104;UBERON:0005153!7.10e-07!37 | |ontology_enrichment_uberon=UBERON:0004119!3.79e-11!169;UBERON:0000925!3.79e-11!169;UBERON:0006595!3.79e-11!169;UBERON:0000466!5.31e-10!126;UBERON:0005911!1.32e-09!82;UBERON:0000077!3.01e-09!130;UBERON:0001007!3.74e-09!155;UBERON:0001555!3.74e-09!155;UBERON:0007026!3.74e-09!155;UBERON:0001048!7.31e-09!168;UBERON:0001041!3.03e-08!98;UBERON:0002100!1.00e-07!216;UBERON:0009569!3.65e-07!113;UBERON:0004921!3.84e-07!129;UBERON:0004185!3.84e-07!129;UBERON:0000464!6.53e-07!104;UBERON:0005153!7.10e-07!37 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,5.34e-09,82;UBERON:0002100,9.16e-09,199;UBERON:0004119,9.37e-08,160;UBERON:0000925,9.37e-08,160;UBERON:0006595,9.37e-08,160;UBERON:0005177,9.93e-08,101;UBERON:0009569,1.34e-07,112;UBERON:0001048,5.55e-07,160 | |||
|phase1_expression=0.908391896352783,1.07050261945492,3.10099689011137,0,0.893922188854576,0,0,0.631719873426831,0,0.491467873003018,2.79120467188971,0.436882744260345,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,4.07491137921514,0,0.136874425072884,0.125542639594803,0.305653622991805,0,0.393553906568396,0,0,0.154816123316076,2.75826367343678,4.51808878167375,17.7481924880058,0.542270404062111,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0.853460445133014,1.20118796110804,0.574752439954483,1.32208974556972,0,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0.668745981562712,0,0,0,0.222820913770347,0,0.443067789167242,0.270803863765016,0.896639238079726,1.04047478047903,0.164437904603676,0,0.289803085735052,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40648818027883,0.722878304769133,2.00535164254356,0.724232594804119,0,1.45990461090791,0.0945348171640679,0.665188192387692,0,0,8.74308691902101,5.56176664176644,0,0.174129737299267,0,0,0,0,0.596287222100115,0,0.694281003215189,0.56530794192401,2.51699661725944,1.6507082516404,0.208994966536811,0,1.06729878806013,0.66944122552934,1.20848795132744,0.760272105718513,1.95249646038536,1.10298924103761,3.24056779152704,0.0892997282840798,0.673588117878509,0.563057402416611,1.53316637465883,2.84779697870439,0.732806975721629,0,0,2.18047026071267,2.48485975847659,1.2663051166458,0.397227542439656,3.72887606973458,2.83734705758686,1.68203280042692,3.20246987189115,2.4666754841716,0,2.42479209725439,0.163461903113459,0.151357427644931,0,7.49828581868149,0,0,0.149448680551801,0.939475989150119,1.61872944368132,0.140450806702248,0.408308342509787,0.122834317311768,0.826606249406124,0,1.23633464639278,0,7.18618141816238,0.168336113954066,0,0.277064115484183,0.877955241761676,0,0.901428353439581,0.226864366320042,0,1.06778694409284,0.635795703478686,0.600182192168805,0.92747276314595,0.772921620136887,1.11670113798954,0.506328996723799,0.779496041289589,0.252433774244115,0.644349290496095,0.484938170456436,0,0.201504196455281,0,1.35282597214308,1.90922284413584,0.860413786167011,0,0,0,0.207322110030741,0,0,0,0,0,0,0,1.30137480043828,1.51726221070292,0.723033089650446,0.992645754591546,0.217879444092406,0.237270619111097,0.674156540800822,0.588664395376038,0.38474715694639,0.738155454624648,1.40241773803446,0,0,1.26755034821831,1.96565443335525,0.590789906681404,0.441463099414651,0.245976877086227,0.514703430895577,2.85350742062426,17.9842805212191,3.21692711717219,1.29623823221941,6.84197441151682,1.03993478527958,0,0.231860809950154,1.6437217193015,1.44366447761074,0,0.190254152234598,1.58040879591855,1.71697232418975,0,0,0,0.93733833986777,0.503946384596579,1.84307626415102,9.40364488379907,4.35950907770943,2.30029607499127,0,0.176096868026452,0.414656231081544,0,0.25248486685276,0,0.381988425558278,1.17217447210047,1.71072446022705,0,0,0.571652865261156,0.336393253036082,0.43596006883328,0.22001485746285,1.68053230485111,0,0.845302752556,0.797814349754612,0,0.257207374262142,0,0.266422179016099,1.28680194292333,1.62786481617433,0.823240336780769,0.325736184293735,1.42156779497018,0,0.301439377059586,0,0.099972991182057,0,0,0,1.4377491329495,1.14861935834114,0,0.144781306667579,0,0,4.25923547175404,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62759014219841,0.623912584592421,1.24900292158013,2.05013139544115,0.35142424497814,0.601892199455438,4.5481500811197,2.0694614258501,0,0.921845842708516,0.260650843404249,0.783204629850962,0.343143423810856,0,0.215714200818617,0,0.303127571446259,3.32870879020994,1.20956117331872,4.46594054073798,1.38115775959256,1.68396056659844,4.22859192543813,1.53512174720011,3.05622450172854,0,0.154209693802656,0.355123450626254,0.0821271560138091,0.519254429183621,0.232420756919918,0.483437798366489,1.20303882181971,5.61694032508968,3.09999010044438,1.45672934405374,0.917870904715969,3.60959690325929,1.00119938235739,2.35304930753057,0,0.105551628892876,1.13733384070897,1.02056223165909,0.431831832204279,0,0.812839312631559,1.00337954770971,0.764628819135115,1.66215201785745,0.671624264166535,0.219259876645935,0,0.512900250232778,0,3.90454073597164,0.515205058238611,0,0,1.14853107599234,1.30012049207304,3.21367859688319,3.67348729510063,0,0.307007349452259,0.137836572484531,0.966782203814463,0.145016693914229,0.0852266274161009,3.91740956845644,9.91709492165869,14.6064451197481,0.127612712494584,6.87872909817739,1.39453664789186,0.31481234683064,0.6970372701606,1.84820148105653,0.532306030317022,0.869932992075073,0.55597265731176,2.86249773483982,0.372158369359667,0,0.38126038784765,0,2.1396949401696,0.318203247925937,0,0,0,0.353437207037059,0.808729926293264,0,0,0.48763373908959,0.243713489631284,0,0.409499734223957,2.82810863907426,0,0,0,0.438450885253763,0,0,0.608731130888112,0.92947049429925,1.40847801266121,0.286822704408103,1.08073945114433,0,2.48332744849418,0.422215270595328,0,0.75894634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|short_description=p6@TRIB3 | |short_description=p6@TRIB3 | ||
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Latest revision as of 01:55, 16 September 2015
Short description: | p6@TRIB3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TRIB3_5end |
Coexpression cluster: | C2616_Fibroblast_Keratinocyte_Keratocytes_Bronchial_Trabecular_Small_Tracheal |
Association with transcript: | 34bp_to_ENST00000422053, ENST00000485293, uc002wdn.2_5end |
EntrezGene: | TRIB3 |
HGNC: | 16228 |
UniProt: | Q96RU7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.66e-28 | 253 |
endodermal cell | 1.44e-14 | 58 |
endo-epithelial cell | 9.26e-09 | 42 |
embryonic cell | 3.22e-08 | 250 |
squamous epithelial cell | 4.78e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
endo-epithelium | 5.34e-09 | 82 |
trunk | 9.16e-09 | 199 |
endoderm-derived structure | 9.37e-08 | 160 |
endoderm | 9.37e-08 | 160 |
presumptive endoderm | 9.37e-08 | 160 |
trunk region element | 9.93e-08 | 101 |
subdivision of trunk | 1.34e-07 | 112 |
primordium | 5.55e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.25e-13 | 106 |
cell type cancer | 1.35e-11 | 143 |
disease of cellular proliferation | 2.47e-08 | 239 |
cancer | 3.28e-08 | 235 |
disease of anatomical entity | 7.45e-08 | 39 |