FFCP PHASE1:Hg19::chr20:36758111..36758125,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7052 | |EntrezGene=7052 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11778 | |HGNC=11778 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=295bp_to_M98479_5end | |association_with_transcript=295bp_to_M98479_5end | ||
|cluster_id=chr20:36758111..36758125,- | |||
|description=CAGE_peak_20_at_TGM2_5end | |description=CAGE_peak_20_at_TGM2_5end | ||
|id=chr20:36758111..36758125,- | |id=chr20:36758111..36758125,- | ||
|ontology_enrichment_celltype=CL:0000115!1.62e-10!35;CL:0000222!7.78e-09!119;CL:0002078!7.97e-09!44;CL:0002139!1.58e-08!24;CL:0000192!2.27e-08!42;CL:0000514!2.27e-08!42;CL:1000413!7.92e-08!9 | |ontology_enrichment_celltype=CL:0000115!1.62e-10!35;CL:0000222!7.78e-09!119;CL:0002078!7.97e-09!44;CL:0002139!1.58e-08!24;CL:0000192!2.27e-08!42;CL:0000514!2.27e-08!42;CL:1000413!7.92e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000349;3.07e-25;19!CL:0002577;1.52e-16;3!CL:0002195;7.46e-11;2!CL:0002571;7.46e-11;2!CL:0002188;1.88e-09;5!CL:0002541;8.75e-08;3!CL:1000746;7.08e-07;7!CL:1000612;7.08e-07;7 | |ontology_enrichment_celltype_v019=CL:0000349;3.07e-25;19!CL:0002577;1.52e-16;3!CL:0002195;7.46e-11;2!CL:0002571;7.46e-11;2!CL:0002188;1.88e-09;5!CL:0002541;8.75e-08;3!CL:1000746;7.08e-07;7!CL:1000612;7.08e-07;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.24e-25,19;CL:0002577,7.97e-17,3;CL:0002195,2.24e-10,2;CL:0002571,2.24e-10,2;CL:0002188,1.65e-09,5;CL:0002541,7.79e-08,3;CL:0000115,1.07e-07,36;CL:1000746,6.47e-07,7;CL:1000612,6.47e-07,7 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.57e-19!79;UBERON:0007798!4.57e-19!79;UBERON:0003914!3.82e-17!118;UBERON:0004872!3.51e-15!84;UBERON:0000055!1.03e-14!69;UBERON:0004535!6.24e-14!110;UBERON:0001009!8.29e-14!113;UBERON:0001981!4.56e-13!60;UBERON:0007500!4.56e-13!60;UBERON:0004537!4.56e-13!60;UBERON:0006965!4.56e-13!60;UBERON:0000477!4.54e-12!286;UBERON:0001637!9.77e-12!42;UBERON:0003509!9.77e-12!42;UBERON:0004572!9.77e-12!42;UBERON:0005631!3.22e-10!14;UBERON:0000158!3.22e-10!14;UBERON:0004111!3.48e-10!241;UBERON:0003124!1.56e-09!7;UBERON:0000478!2.69e-09!24;UBERON:0000926!3.14e-09!448;UBERON:0004120!3.14e-09!448;UBERON:0006603!3.14e-09!448;UBERON:0000490!4.86e-09!138;UBERON:0000119!2.20e-08!312;UBERON:0005256!2.26e-08!143;UBERON:0000483!2.84e-08!309;UBERON:0000468!3.31e-08!659;UBERON:0004573!3.89e-08!33;UBERON:0004571!3.89e-08!33;UBERON:0003064!4.27e-08!37;UBERON:0006554!6.09e-08!44;UBERON:0003915!7.92e-08!9;UBERON:0004700!7.92e-08!9;UBERON:0001917!7.92e-08!9;UBERON:0001008!1.28e-07!45;UBERON:0000025!1.75e-07!194;UBERON:0002100!1.78e-07!216;UBERON:0003081!2.98e-07!216;UBERON:0000467!5.72e-07!625;UBERON:0000480!6.79e-07!626;UBERON:0004923!9.88e-07!57 | |ontology_enrichment_uberon=UBERON:0002049!4.57e-19!79;UBERON:0007798!4.57e-19!79;UBERON:0003914!3.82e-17!118;UBERON:0004872!3.51e-15!84;UBERON:0000055!1.03e-14!69;UBERON:0004535!6.24e-14!110;UBERON:0001009!8.29e-14!113;UBERON:0001981!4.56e-13!60;UBERON:0007500!4.56e-13!60;UBERON:0004537!4.56e-13!60;UBERON:0006965!4.56e-13!60;UBERON:0000477!4.54e-12!286;UBERON:0001637!9.77e-12!42;UBERON:0003509!9.77e-12!42;UBERON:0004572!9.77e-12!42;UBERON:0005631!3.22e-10!14;UBERON:0000158!3.22e-10!14;UBERON:0004111!3.48e-10!241;UBERON:0003124!1.56e-09!7;UBERON:0000478!2.69e-09!24;UBERON:0000926!3.14e-09!448;UBERON:0004120!3.14e-09!448;UBERON:0006603!3.14e-09!448;UBERON:0000490!4.86e-09!138;UBERON:0000119!2.20e-08!312;UBERON:0005256!2.26e-08!143;UBERON:0000483!2.84e-08!309;UBERON:0000468!3.31e-08!659;UBERON:0004573!3.89e-08!33;UBERON:0004571!3.89e-08!33;UBERON:0003064!4.27e-08!37;UBERON:0006554!6.09e-08!44;UBERON:0003915!7.92e-08!9;UBERON:0004700!7.92e-08!9;UBERON:0001917!7.92e-08!9;UBERON:0001008!1.28e-07!45;UBERON:0000025!1.75e-07!194;UBERON:0002100!1.78e-07!216;UBERON:0003081!2.98e-07!216;UBERON:0000467!5.72e-07!625;UBERON:0000480!6.79e-07!626;UBERON:0004923!9.88e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;7.49e-24;24!UBERON:0005631;9.35e-13;10!UBERON:0000158;9.35e-13;10!UBERON:0001987;1.56e-12;4!UBERON:0003124;8.75e-08;3!UBERON:0000920;8.75e-08;3!UBERON:0000305;3.26e-07;7!UBERON:0003513;4.82e-07;7!UBERON:0000074;7.08e-07;7!UBERON:0001229;7.08e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0000478;7.49e-24;24!UBERON:0005631;9.35e-13;10!UBERON:0000158;9.35e-13;10!UBERON:0001987;1.56e-12;4!UBERON:0003124;8.75e-08;3!UBERON:0000920;8.75e-08;3!UBERON:0000305;3.26e-07;7!UBERON:0003513;4.82e-07;7!UBERON:0000074;7.08e-07;7!UBERON:0001229;7.08e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,5.45e-24,24;UBERON:0005631,9.07e-23,14;UBERON:0000158,9.07e-23,14;UBERON:0003124,8.61e-19,7;UBERON:0001987,9.65e-13,4;UBERON:0004340,9.65e-13,4;UBERON:0003914,4.90e-11,117;UBERON:0003081,5.02e-09,203;UBERON:0000920,7.79e-08,3;UBERON:0004872,9.88e-08,83;UBERON:0004923,2.08e-07,66;UBERON:0000305,3.52e-07,7;UBERON:0003513,5.83e-07,7;UBERON:0010532,6.47e-07,7;UBERON:0000074,6.47e-07,7;UBERON:0001229,6.47e-07,7;UBERON:0001230,6.47e-07,7;UBERON:0003220,6.47e-07,7;UBERON:0005749,6.47e-07,7;UBERON:0004199,6.47e-07,7;UBERON:0004209,6.47e-07,7;UBERON:0004198,6.47e-07,7 | |||
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| ||
|short_description=p20@TGM2 | |short_description=p20@TGM2 | ||
}} | }} |
Latest revision as of 02:49, 16 September 2015
Short description: | p20@TGM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_TGM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 295bp_to_M98479_5end |
EntrezGene: | TGM2 |
HGNC: | 11778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.24e-25 | 19 |
placental epithelial cell | 7.97e-17 | 3 |
hepatic stem cell | 2.24e-10 | 2 |
hepatic mesenchymal stem cell | 2.24e-10 | 2 |
glomerular endothelial cell | 1.65e-09 | 5 |
chorionic membrane mesenchymal stem cell | 7.79e-08 | 3 |
endothelial cell | 1.07e-07 | 36 |
glomerular cell | 6.47e-07 | 7 |
kidney corpuscule cell | 6.47e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 5.45e-24 | 24 |
extraembryonic membrane | 9.07e-23 | 14 |
membranous layer | 9.07e-23 | 14 |
chorion | 8.61e-19 | 7 |
placenta | 9.65e-13 | 4 |
allantois | 9.65e-13 | 4 |
epithelial tube | 4.90e-11 | 117 |
lateral plate mesoderm | 5.02e-09 | 203 |
egg chorion | 7.79e-08 | 3 |
splanchnic layer of lateral plate mesoderm | 9.88e-08 | 83 |
organ component layer | 2.08e-07 | 66 |
amnion | 3.52e-07 | 7 |
trunk blood vessel | 5.83e-07 | 7 |
primitive nephron | 6.47e-07 | 7 |
renal glomerulus | 6.47e-07 | 7 |
renal corpuscle | 6.47e-07 | 7 |
glomerular capsule | 6.47e-07 | 7 |
metanephric mesenchyme | 6.47e-07 | 7 |
glomerular tuft | 6.47e-07 | 7 |
S-shaped body | 6.47e-07 | 7 |
renal vesicle | 6.47e-07 | 7 |
comma-shaped body | 6.47e-07 | 7 |