FFCP PHASE1:Hg19::chr1:228275830..228275846,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=375 | |EntrezGene=375 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=652 | |HGNC=652 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=13bp_to_ENST00000497165_5end | |association_with_transcript=13bp_to_ENST00000497165_5end | ||
|cluster_id=chr1:228275830..228275846,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_20_at_ARF1_5end | |description=CAGE_peak_20_at_ARF1_5end | ||
|id=chr1:228275830..228275846,+ | |id=chr1:228275830..228275846,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.61e-16!42;CL:0002139!1.42e-14!24;CL:0000860!1.51e-14!45;CL:0000359!8.36e-14!32;CL:0000766!2.20e-13!76;CL:0000557!4.02e-10!71;CL:0000839!1.01e-09!70;CL:0000071!1.17e-09!18;CL:0002546!1.17e-09!18;CL:0000763!1.33e-09!112;CL:0000049!1.33e-09!112;CL:0002009!5.35e-09!65;CL:0002194!6.98e-09!63;CL:0000576!6.98e-09!63;CL:0000040!6.98e-09!63;CL:0000559!6.98e-09!63;CL:0000115!7.45e-09!35;CL:0000192!9.65e-09!42;CL:0000514!9.65e-09!42;CL:0000222!3.42e-08!119;CL:1000413!5.08e-08!9;CL:0000048!6.07e-07!430;CL:0000034!7.29e-07!444;CL:0000738!7.97e-07!140;CL:0005020!8.82e-07!6;CL:0002138!8.82e-07!6;CL:0005022!8.82e-07!6;CL:0000723!9.71e-07!436 | |ontology_enrichment_celltype=CL:0002057!2.61e-16!42;CL:0002139!1.42e-14!24;CL:0000860!1.51e-14!45;CL:0000359!8.36e-14!32;CL:0000766!2.20e-13!76;CL:0000557!4.02e-10!71;CL:0000839!1.01e-09!70;CL:0000071!1.17e-09!18;CL:0002546!1.17e-09!18;CL:0000763!1.33e-09!112;CL:0000049!1.33e-09!112;CL:0002009!5.35e-09!65;CL:0002194!6.98e-09!63;CL:0000576!6.98e-09!63;CL:0000040!6.98e-09!63;CL:0000559!6.98e-09!63;CL:0000115!7.45e-09!35;CL:0000192!9.65e-09!42;CL:0000514!9.65e-09!42;CL:0000222!3.42e-08!119;CL:1000413!5.08e-08!9;CL:0000048!6.07e-07!430;CL:0000034!7.29e-07!444;CL:0000738!7.97e-07!140;CL:0005020!8.82e-07!6;CL:0002138!8.82e-07!6;CL:0005022!8.82e-07!6;CL:0000723!9.71e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.87e-14;33!CL:0002057;3.87e-14;33!CL:1000413;6.32e-14;9!CL:0000226;2.69e-11;3!CL:0000842;2.69e-11;3!CL:0000473;2.08e-10;39!CL:0000234;2.08e-10;39!CL:0002544;1.08e-09;6!CL:0000359;1.56e-09;32!CL:0002539;5.03e-09;10!CL:0000771;1.57e-08;2!CL:0002139;2.49e-08;24!CL:0002545;4.35e-08;2!CL:0000094;1.05e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:1000413,7.88e-14,9;CL:0000860,5.29e-12,42;CL:0002057,5.29e-12,42;CL:0000226,2.66e-11,3;CL:0000842,2.66e-11,3;CL:0000766,1.23e-10,72;CL:0000473,3.79e-10,48;CL:0000234,3.79e-10,48;CL:0002544,8.97e-10,6;CL:0000359,2.62e-09,32;CL:0002539,6.28e-09,10;CL:0000771,1.55e-08,2;CL:0002139,2.94e-08,24;CL:0002545,4.06e-08,2;CL:0000094,8.85e-08,8;CL:0002194,1.43e-07,59;CL:0000576,1.43e-07,59;CL:0000040,1.43e-07,59;CL:0000559,1.43e-07,59;CL:0002009,3.06e-07,61;CL:0000763,8.12e-07,108;CL:0000049,8.12e-07,108;CL:0000738,8.64e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;1.01e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.40e-28!216;UBERON:0004535!4.25e-28!110;UBERON:0001009!1.05e-27!113;UBERON:0001637!2.30e-25!42;UBERON:0003509!2.30e-25!42;UBERON:0004572!2.30e-25!42;UBERON:0000055!3.04e-25!69;UBERON:0001981!2.29e-22!60;UBERON:0007500!2.29e-22!60;UBERON:0004537!2.29e-22!60;UBERON:0006965!2.29e-22!60;UBERON:0004872!1.58e-20!84;UBERON:0002049!6.47e-20!79;UBERON:0007798!6.47e-20!79;UBERON:0004573!8.12e-18!33;UBERON:0004571!8.12e-18!33;UBERON:0002193!1.11e-16!112;UBERON:0002390!2.22e-14!102;UBERON:0003061!2.22e-14!102;UBERON:0000178!1.10e-11!15;UBERON:0000179!1.10e-11!15;UBERON:0000463!1.10e-11!15;UBERON:0003914!7.26e-10!118;UBERON:0000947!9.83e-10!21;UBERON:0010191!9.83e-10!21;UBERON:0001986!1.17e-09!18;UBERON:0004638!1.17e-09!18;UBERON:0004852!1.17e-09!18;UBERON:0002204!1.56e-09!167;UBERON:0003915!5.08e-08!9;UBERON:0004700!5.08e-08!9;UBERON:0001917!5.08e-08!9;UBERON:0002371!7.30e-08!80;UBERON:0000926!2.24e-07!448;UBERON:0004120!2.24e-07!448;UBERON:0006603!2.24e-07!448;UBERON:0000487!3.75e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.84e-35;15!UBERON:0000179;1.84e-35;15!UBERON:0000463;1.84e-35;15!UBERON:0002390;1.98e-14;32!UBERON:0003915;6.32e-14;9!UBERON:0004700;6.32e-14;9!UBERON:0001917;6.32e-14;9!UBERON:0001637;2.15e-12;42!UBERON:0003509;2.15e-12;42!UBERON:0004572;2.15e-12;42!UBERON:0000947;2.20e-12;21!UBERON:0010191;2.20e-12;21!UBERON:0002193;1.84e-11;42!UBERON:0004573;3.15e-11;33!UBERON:0004571;3.15e-11;33!UBERON:0007500;5.68e-10;56!UBERON:0001981;5.68e-10;56!UBERON:0004537;5.68e-10;56!UBERON:0004237;5.03e-09;10!UBERON:0004695;5.03e-09;10!UBERON:0002111;5.03e-09;10!UBERON:0004178;5.03e-09;10!UBERON:0004535;2.64e-08;109!UBERON:0005800;4.35e-08;2!UBERON:0001515;4.35e-08;2!UBERON:0001009;2.26e-07;112 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.86e-35,15;UBERON:0000179,1.86e-35,15;UBERON:0000463,1.86e-35,15;UBERON:0004535,3.98e-25,109;UBERON:0001009,3.02e-24,112;UBERON:0003081,4.16e-24,203;UBERON:0002193,1.48e-18,108;UBERON:0001637,5.18e-18,42;UBERON:0003509,5.18e-18,42;UBERON:0004572,5.18e-18,42;UBERON:0002390,9.29e-18,98;UBERON:0003061,9.29e-18,98;UBERON:0000926,6.30e-14,315;UBERON:0004120,6.30e-14,315;UBERON:0006603,6.30e-14,315;UBERON:0003915,7.88e-14,9;UBERON:0004700,7.88e-14,9;UBERON:0001917,7.88e-14,9;UBERON:0004573,4.01e-13,33;UBERON:0004571,4.01e-13,33;UBERON:0000055,1.18e-12,68;UBERON:0000947,2.37e-12,21;UBERON:0010191,2.37e-12,21;UBERON:0007500,9.29e-12,59;UBERON:0001981,9.29e-12,59;UBERON:0004537,9.29e-12,59;UBERON:0006965,9.29e-12,59;UBERON:0002049,1.66e-10,78;UBERON:0007798,1.66e-10,78;UBERON:0004872,1.01e-09,83;UBERON:0004237,6.28e-09,10;UBERON:0004695,6.28e-09,10;UBERON:0002111,6.28e-09,10;UBERON:0004178,6.28e-09,10;UBERON:0005800,4.06e-08,2;UBERON:0001515,4.06e-08,2;UBERON:0003498,5.21e-07,5;UBERON:0005985,5.21e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01697543935533,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0,0,0,0,1.59938062657521,0.377875943688809,0.485168122375632,1.16214518452842,0,0,0.28769239232215,0.512321413058201,0.236482229888585,1.37898272294647,1.93645405075148,2.70852973188684,1.31769637679823,1.36453075028923,0.898893937780338,0.918251677112708,0.320929027076094,2.55734850319616,0.659702600373432,0.199463657621632,0.426224750532694,2.61188314765726,2.26954089876456,0.622822248995575,0,0,0,3.02699751316684,1.10483290796269,1.58231193720442,0,0,0,0.22465726229299,0.150176892841506,0.16072558669708,0,0,0,0,0,0.889509253863555,0.426730222566507,0,1.14950487990897,0,0,0,0,0,2.64342657158052,0.560508562981536,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0,0.26591592103773,0,0,0,1.78886166630035,0,0.694281003215189,1.13061588384802,2.09749718104953,0.275118041940067,1.04497483268405,0.775250277507987,0.71153252537342,0.33472061276467,0.805658634218294,0.760272105718513,0.732186172644509,1.10298924103761,1.62028389576352,0.267899184852239,0,0.225222960966644,0,0,0.366403487860815,1.31780417436063,3.87780264148325,0,0.496971951695318,0.12663051166458,0,0.573673241497627,0.709336764396714,0,0,0.49333509683432,0,0.808264032418128,0,0,0,0,0.312160076830321,0.570471821544449,0.298897361103602,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0,0,0.211931901159562,0,0,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,1.15493158208859,0.462985512576611,1.33177906564219,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0.492663237895943,0.088048434013226,0.621984346622316,0,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0,0,0.179060963239896,0,0,0.215627574859517,0,0,0,0,0,0,0,0,3.72973962092432,0,0,0,0.207970861530807,0,0,0,0.601892199455438,0,1.03473071292505,0,0,0.173767228936166,0,0,1.44737618286021,1.2942852049117,1.17400313583789,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0,0,0,0,0.164254312027618,0,0,0,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0.510281115829547,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,0,0.30347334256665,2.78907329578371,1.25924938732256,1.3940745403212,0,1.06461206063404,0,0.74129687641568,0.858749320451947,0,0,0,0,0.855877976067841,0.318203247925937,0.78494864019923,0,0,0,1.41527737101321,1.58510321173008,0.421258456238981,0,0.243713489631284,1.05650146756755,0,0,1.13008116620243,0,0.66343897524122,0.876901770507525,0,0,1.42037263873893,0.30982349809975,0.563391205064483,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0.443430153536676,0,32.984094600091,30.585488285695,19.3680043639215,12.388052323805,8.22724546172388,36.9629787379849,20.5211946150484,29.345631522888,0,0,0,0,0,0,0,0,0,7.62024897805978,0.324621940274555,0,0.684704037099577,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.974154617347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0.126621591911757,0,0,0,0,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0.320362237703084,0.471612915298998,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0.758245587708239,0,0.235265819698172,0,0,0,0,0,0,0,0,2.05956061557231,0.151230923763239,0,0.147855149989634,0,2.69881867298163,0,0,0.53168342911599,0,0,0,0,0,0,0.464033759878494,0,0,0,0.336749488765919,0,0,0,0.782982875895635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,1.50794029276486,0,0,0,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0.490751168076215,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0.751871343838829,0.709036767709349,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0.432626562123789,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0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 | ||
|short_description=p20@ARF1 | |short_description=p20@ARF1 | ||
}} | }} |
Latest revision as of 03:02, 16 September 2015
Short description: | p20@ARF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_ARF1_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 13bp_to_ENST00000497165_5end |
EntrezGene: | ARF1 |
HGNC: | 652 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of artery | 7.88e-14 | 9 |
classical monocyte | 5.29e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.29e-12 | 42 |
single nucleate cell | 2.66e-11 | 3 |
mononuclear cell | 2.66e-11 | 3 |
myeloid leukocyte | 1.23e-10 | 72 |
defensive cell | 3.79e-10 | 48 |
phagocyte | 3.79e-10 | 48 |
aortic endothelial cell | 8.97e-10 | 6 |
vascular associated smooth muscle cell | 2.62e-09 | 32 |
aortic smooth muscle cell | 6.28e-09 | 10 |
eosinophil | 1.55e-08 | 2 |
endothelial cell of vascular tree | 2.94e-08 | 24 |
thoracic aorta endothelial cell | 4.06e-08 | 2 |
granulocyte | 8.85e-08 | 8 |
monopoietic cell | 1.43e-07 | 59 |
monocyte | 1.43e-07 | 59 |
monoblast | 1.43e-07 | 59 |
promonocyte | 1.43e-07 | 59 |
macrophage dendritic cell progenitor | 3.06e-07 | 61 |
myeloid cell | 8.12e-07 | 108 |
common myeloid progenitor | 8.12e-07 | 108 |
leukocyte | 8.64e-07 | 136 |