FFCP PHASE1:Hg19::chr12:108732917..108732935,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1240 | |EntrezGene=1240 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2121 | |HGNC=2121 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=154bp_to_ENST00000552995_5end | |association_with_transcript=154bp_to_ENST00000552995_5end | ||
|cluster_id=chr12:108732917..108732935,- | |||
|description=CAGE_peak_5_at_CMKLR1_5end | |description=CAGE_peak_5_at_CMKLR1_5end | ||
|id=chr12:108732917..108732935,- | |id=chr12:108732917..108732935,- | ||
|ontology_enrichment_celltype=CL:0002619!1.76e-10!3;CL:0002549!1.00e-07!2;CL:0000235!2.29e-07!10;CL:0000327!2.49e-07!14;CL:0002575!2.87e-07!2 | |ontology_enrichment_celltype=CL:0002619!1.76e-10!3;CL:0002549!1.00e-07!2;CL:0000235!2.29e-07!10;CL:0000327!2.49e-07!14;CL:0002575!2.87e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002619;1.10e-49;3!CL:0002549;1.11e-34;2!CL:0000708;5.76e-23;3!CL:0000235;7.08e-12;6!CL:0000327;1.62e-10;15!CL:0000346;7.08e-07;3!CL:1000428;7.08e-07;3 | |ontology_enrichment_celltype_v019=CL:0002619;1.10e-49;3!CL:0002549;1.11e-34;2!CL:0000708;5.76e-23;3!CL:0000235;7.08e-12;6!CL:0000327;1.62e-10;15!CL:0000346;7.08e-07;3!CL:1000428;7.08e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002619,1.41e-49,3;CL:0002549,1.11e-34,2;CL:0000708,5.15e-23,3;CL:0000235,7.91e-12,6;CL:0000327,1.45e-10,15;CL:0000346,7.28e-07,3;CL:1000428,7.28e-07,3;CL:0002194,7.36e-07,59;CL:0000576,7.36e-07,59;CL:0000040,7.36e-07,59;CL:0000559,7.36e-07,59 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005284!3.23e-10!5;UBERON:0002390!3.41e-08!102;UBERON:0003061!3.41e-08!102;UBERON:0003947!1.00e-07!2;UBERON:0005629!1.00e-07!2;UBERON:0005358!1.00e-07!2;UBERON:0001886!1.00e-07!2;UBERON:0004086!1.00e-07!2;UBERON:0005282!1.00e-07!2;UBERON:0005281!1.00e-07!2;UBERON:0002193!5.09e-07!112 | |ontology_enrichment_uberon=UBERON:0005284!3.23e-10!5;UBERON:0002390!3.41e-08!102;UBERON:0003061!3.41e-08!102;UBERON:0003947!1.00e-07!2;UBERON:0005629!1.00e-07!2;UBERON:0005358!1.00e-07!2;UBERON:0001886!1.00e-07!2;UBERON:0004086!1.00e-07!2;UBERON:0005282!1.00e-07!2;UBERON:0005281!1.00e-07!2;UBERON:0002193!5.09e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0005629;1.11e-34;2!UBERON:0005358;1.11e-34;2!UBERON:0001886;1.11e-34;2!UBERON:0004086;1.11e-34;2!UBERON:0005282;1.11e-34;2!UBERON:0005281;1.11e-34;2!UBERON:0003210;5.76e-23;3!UBERON:0005284;1.61e-14;5!UBERON:0006876;4.30e-07;11!UBERON:0000412;7.08e-07;3!UBERON:0001992;7.08e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0005629;1.11e-34;2!UBERON:0005358;1.11e-34;2!UBERON:0001886;1.11e-34;2!UBERON:0004086;1.11e-34;2!UBERON:0005282;1.11e-34;2!UBERON:0005281;1.11e-34;2!UBERON:0003210;5.76e-23;3!UBERON:0005284;1.61e-14;5!UBERON:0006876;4.30e-07;11!UBERON:0000412;7.08e-07;3!UBERON:0001992;7.08e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,1.11e-34,2;UBERON:0005358,1.11e-34,2;UBERON:0001886,1.11e-34,2;UBERON:0004086,1.11e-34,2;UBERON:0005282,1.11e-34,2;UBERON:0005281,1.11e-34,2;UBERON:0003210,5.15e-23,3;UBERON:0005284,1.61e-14,5;UBERON:0006876,4.30e-07,11;UBERON:0000412,7.28e-07,3;UBERON:0001992,7.28e-07,3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,1.11957737119962,1.29557466407592,2.06060454107349,0,0,0.727752183563449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0.473554504088034,0,0,0,0.144824403882799,0,0,0,0,1.50401373190767,0.144846518960824,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08665054641315,4.03323147135999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76269842704961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91540819297938,0,1.1734125731352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,0,0,0,0,0.144781306667579,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.587403472388222,0.686286847621712,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0,2.88743956579008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.379119477770928,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375935671919414,0.45120521581504,0,0,0,0,0,0.917458566809082,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | ||
|short_description=p5@CMKLR1 | |short_description=p5@CMKLR1 | ||
}} | }} |
Latest revision as of 04:32, 16 September 2015
Short description: | p5@CMKLR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CMKLR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 154bp_to_ENST00000552995_5end |
EntrezGene: | CMKLR1 |
HGNC: | 2121 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 1.41e-49 | 3 |
fibroblast of choroid plexus | 1.11e-34 | 2 |
leptomeningeal cell | 5.15e-23 | 3 |
macrophage | 7.91e-12 | 6 |
extracellular matrix secreting cell | 1.45e-10 | 15 |
hair follicle dermal papilla cell | 7.28e-07 | 3 |
stem cell of epidermis | 7.28e-07 | 3 |
monopoietic cell | 7.36e-07 | 59 |
monocyte | 7.36e-07 | 59 |
monoblast | 7.36e-07 | 59 |
promonocyte | 7.36e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 1.11e-34 | 2 |
ventricle of nervous system | 1.11e-34 | 2 |
choroid plexus | 1.11e-34 | 2 |
brain ventricle | 1.11e-34 | 2 |
ventricular system of brain | 1.11e-34 | 2 |
ventricular system of central nervous system | 1.11e-34 | 2 |
blood-cerebrospinal fluid barrier | 5.15e-23 | 3 |
brain vasculature | 1.61e-14 | 5 |
vasculature of organ | 4.30e-07 | 11 |
dermal papilla | 7.28e-07 | 3 |
papillary layer of dermis | 7.28e-07 | 3 |