FFCP PHASE1:Hg19::chr12:108733078..108733111,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:108733078..108733111,- to FFCP PHASE1:Hg19::chr12:108733078..108733111,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1240 | |EntrezGene=1240 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2121 | |HGNC=2121 | ||
|TSSclassifier=strong | |||
|UniProt=Q99788 | |UniProt=Q99788 | ||
|association_with_transcript=0bp_to_ENST00000312143,ENST00000397688,ENST00000552995,NM_001142343,NM_001142344,NM_004072,uc001tmv.2,uc001tmw.2,uc009zuv.2_5end | |||
|cluster_id=chr12:108733078..108733111,- | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_1_at_CMKLR1_5end | |||
|id=chr12:108733078..108733111,- | |||
|ontology_enrichment_celltype=CL:0000839!3.46e-12!70;CL:0002194!4.33e-12!63;CL:0000576!4.33e-12!63;CL:0000040!4.33e-12!63;CL:0000559!4.33e-12!63;CL:0002009!4.04e-11!65;CL:0002057!2.59e-10!42;CL:0000557!6.78e-10!71;CL:0000766!9.22e-10!76;CL:0000860!1.09e-08!45;CL:0002087!3.29e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000473;7.23e-09;39!CL:0000234;7.23e-09;39!CL:0000576;7.19e-08;48!CL:0000235;6.16e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.60e-14,48;CL:0000234,2.60e-14,48;CL:0002194,3.39e-14,59;CL:0000576,3.39e-14,59;CL:0000040,3.39e-14,59;CL:0000559,3.39e-14,59;CL:0000839,1.53e-13,66;CL:0002009,3.30e-13,61;CL:0000766,4.01e-11,72;CL:0000557,4.03e-11,67;CL:0000860,3.96e-10,42;CL:0002057,3.96e-10,42;CL:0002087,1.31e-07,115;CL:0000235,6.22e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;5.34e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.52e-38!115;UBERON:0002390!8.79e-14!102;UBERON:0003061!8.79e-14!102;UBERON:0000479!3.39e-12!787;UBERON:0002193!1.37e-11!112;UBERON:0002371!1.69e-10!80;UBERON:0004765!1.44e-09!101;UBERON:0001434!1.44e-09!101;UBERON:0001474!4.71e-09!86;UBERON:0002616!5.65e-09!59;UBERON:0001049!1.91e-08!57;UBERON:0005068!1.91e-08!57;UBERON:0006241!1.91e-08!57;UBERON:0007135!1.91e-08!57;UBERON:0002405!4.27e-08!115;UBERON:0001017!1.44e-07!82;UBERON:0005743!2.30e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.31e-11;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.47e-41,114;UBERON:0002390,5.37e-16,98;UBERON:0003061,5.37e-16,98;UBERON:0002193,5.12e-14,108;UBERON:0000479,2.79e-12,773;UBERON:0002371,1.25e-11,76;UBERON:0001434,2.09e-11,100;UBERON:0004765,9.55e-11,90;UBERON:0002405,1.65e-10,93;UBERON:0001474,1.36e-09,82 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.281908808191942,0,0,0,0,10.1075179748293,2.08948502559871,0,0,0,0,18.3174202380869,13.9186897805725,3.36162573225888,0,0,0,0,0.204000691244253,0.313454721478088,0.286235987131057,0,0.502170558379211,0.229240217243854,0.246301768349837,0.157421562627358,3.14691421479123,4.60595277716655,2.47705797305722,0,0,0,0,0,0,1.66198622559563,2.20598892217156,4.99125002646459,232.424262261041,179.437090974515,282.560397694703,2.03557534291391,3.77875943688809,9.46077838632483,4.88100977501938,4.11167888021826,2.78735733805593,2.8769239232215,1.2808035326455,3.54723344832878,1.37898272294647,1.29096936716765,2.70852973188684,3.76484679085209,3.27487380069415,4.94391665779186,2.14258724659632,1.60464513538047,0.639337125799041,3.29851300186716,4.18873681005427,8.09827026012119,2.32167390902867,0.56738522469114,3.11411124497787,0.75374599577023,1.0429658368404,2.82345498116652,3.63239701580021,1.84138817993782,3.79754864929061,9.29523259772544,11.9058407980424,8.80566311135179,2.47122988522289,1.80212271409808,1.28580469357664,7.12531859353121,3.58050018958362,4.01861138282195,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0,0.589211814949674,0.664601683750863,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,2.86708872891687,4.55758417699493,0.950452044448374,9.48623250189969,8.83107616965487,2.49861453104692,5.44587679701239,7.39015197228942,4.83856183739358,2.94184215361858,3.76543450095277,0,0,0,31.8066454098418,28.0749229956098,20.8578987303586,95.4343136461319,68.128881842369,0.661743720148475,0.443458794925128,0.351339142772504,10.3473469643193,0,0,0.324547393654683,0.522389211897802,3.45690697349049,27.6649124194197,28.5997455390064,11.8866400425461,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0.225222960966644,0,0,0,0,0,0,4.96971951695318,0,0,0,1.41867352879343,0.560677600142307,0,0,0.311211035399766,0,0,27.5470518313775,40.9084906380799,0,0.312160076830321,0,1.94283284717341,0,0.161872944368132,0,15.5157170153719,0.122834317311768,19.2185952986924,13.0680314301026,7.66527480763526,0,0,0,0.250237039743928,2.49357703935765,2.19488810440419,2.75839016219118,7.66214100423644,0.340296549480063,0.358779271377724,3.20336083227851,2.33125091275518,0,1.75189299705346,2.57640540045629,4.28068769562657,0,0.0974370051611986,0,0.920498986422993,3.07127507955743,0.355009592516614,0,0,0,0,0,0.121973706129595,0.265059536642971,1.16193942869518,1.34759371519982,0.252320850875628,0,6.25798129319264,18.0107462694008,31.7710319110705,0.464367928031979,5.77503585335668,0,0,0,0,0,0,0,0,0,0.738155454624648,4.20725321410337,0.4115740113314,0,1.26755034821831,1.96565443335525,10.0434284135839,0,0.122988438543114,0,0,0,0,0,0,1.03993478527958,0,0.115930404975077,0,0,0,0,0,0,130.987447238495,25.2724606350377,84.8683936668638,0,0,0,0,0,0,0,0,1.03664057770386,0.432359860250884,0.50496973370552,0.380987365753014,0,0,0,0,0,0,18.5016289169845,3.48768055066624,13.4209063052339,2.84397774667111,0,5.071816515336,0,0,4.62973273671856,4.25547396069835,8.25908754949908,0,20.6196210048748,15.6415663988346,3.25736184293735,0,4.75171123760058,0,0,0,96.0827867065405,111.501074297932,84.3335757932126,5.99062138728957,0,2.85273810081437,3.4747513600219,13.9723899334261,9.31117008847457,0,12.4129378927214,7.33133754522359,8.98401253958239,1.01637849688985,0,0,1.17261385734044,0,0,0,0,11.2876172381609,7.50255781589516,4.06897535549603,0,0,0,0,15.9501432855691,9.09630016223939,4.1389228517002,1.99267679560631,3.87175253937577,0.260650843404249,5.286631251494,11.6668764095691,5.16920065307218,5.39285502046542,7.57765660404455,0,0,0.30239029332968,0.496215615637554,2.60885354589706,0.561320188866147,0,0.511707249066704,0.64341568457443,1.48418066444991,0.616838775210622,5.68197521002007,0.0821271560138091,0,1.27831416305955,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,16.4444907484451,16.4704334145687,0,0,0.325378394664303,10.3041011647722,0,0,0,1.95018073810956,0,1.06337790121334,0,0.460511024178389,0.413509717453592,0.107420244868274,0,0.596586391912706,8.54707542208679,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,2.97726695487734,6.96034734381197,0.571890581771475,0.255897791311334,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,1.75380354101505,0,0,0,0,0,0.143411352204052,0.392996164052485,0,0,3.16661452946496,3.29294892959902,2.27683904259429,3.84928192269481,0,0,0,8.94366107379402,0,0,0,0,6.08937131078603,4.58782324285425,4.5571774973933,6.4322579373603,8.22724546172388,5.18778648954174,6.48037724685738,4.75875105776562,0,54.8613517500114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67043704337145,0,0,0,0,0,14.9438342857332,0,0,0,0,0,0,0.994147647766298,3.79807424308384,0,0,0,36.2631338616947,8.56480138146558,0,0,0.492339221844278,0.311039587661807,0,0,0,5.91860433821602,11.974154617347,0,2.90799823828566,2.78304294485554,3.99227596002388,0,0,2.89999830173917,0,0,0,0,0,0,1.77148277162768,3.25610384288601,0,0.99521333938102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| 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| ||
|short_description=p1@CMKLR1 | |||
}} | }} |
Latest revision as of 04:33, 16 September 2015
Short description: | p1@CMKLR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CMKLR1_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 0bp_to_ENST00000312143, ENST00000397688, ENST00000552995, NM_001142343, NM_001142344, NM_004072, uc001tmv.2, uc001tmw.2, uc009zuv.2_5end |
EntrezGene: | CMKLR1 |
HGNC: | 2121 |
UniProt: | Q99788 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.60e-14 | 48 |
phagocyte | 2.60e-14 | 48 |
monopoietic cell | 3.39e-14 | 59 |
monocyte | 3.39e-14 | 59 |
monoblast | 3.39e-14 | 59 |
promonocyte | 3.39e-14 | 59 |
myeloid lineage restricted progenitor cell | 1.53e-13 | 66 |
macrophage dendritic cell progenitor | 3.30e-13 | 61 |
myeloid leukocyte | 4.01e-11 | 72 |
granulocyte monocyte progenitor cell | 4.03e-11 | 67 |
classical monocyte | 3.96e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.96e-10 | 42 |
nongranular leukocyte | 1.31e-07 | 115 |
macrophage | 6.22e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.47e-41 | 114 |
hematopoietic system | 5.37e-16 | 98 |
blood island | 5.37e-16 | 98 |
hemolymphoid system | 5.12e-14 | 108 |
tissue | 2.79e-12 | 773 |
bone marrow | 1.25e-11 | 76 |
skeletal system | 2.09e-11 | 100 |
skeletal element | 9.55e-11 | 90 |
immune system | 1.65e-10 | 93 |
bone element | 1.36e-09 | 82 |