FFCP PHASE1:Hg19::chr5:149877440..149877458,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3340 | |EntrezGene=3340 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7680 | |HGNC=7680 | ||
|TSSclassifier=strong | |||
|UniProt=E5RG24 | |UniProt=E5RG24 | ||
|association_with_transcript=-30bp_to_ENST00000518299_5end | |association_with_transcript=-30bp_to_ENST00000518299_5end | ||
|cluster_id=chr5:149877440..149877458,+ | |||
|description=CAGE_peak_9_at_NDST1_5end | |description=CAGE_peak_9_at_NDST1_5end | ||
|id=chr5:149877440..149877458,+ | |id=chr5:149877440..149877458,+ | ||
|ontology_enrichment_celltype=CL:0000220!2.12e-14!246;CL:0002321!5.31e-14!248;CL:0002076!4.16e-12!43;CL:0000359!3.13e-09!32;CL:0000055!8.35e-09!180;CL:0002368!2.27e-08!13;CL:0000066!4.75e-08!254;CL:0000192!8.69e-08!42;CL:0000514!8.69e-08!42;CL:0002371!1.60e-07!591;CL:0000680!1.76e-07!57;CL:0000056!1.76e-07!57;CL:0000355!1.76e-07!57;CL:0000222!2.85e-07!119;CL:0000223!3.19e-07!59;CL:0000144!9.43e-07!625 | |ontology_enrichment_celltype=CL:0000220!2.12e-14!246;CL:0002321!5.31e-14!248;CL:0002076!4.16e-12!43;CL:0000359!3.13e-09!32;CL:0000055!8.35e-09!180;CL:0002368!2.27e-08!13;CL:0000066!4.75e-08!254;CL:0000192!8.69e-08!42;CL:0000514!8.69e-08!42;CL:0002371!1.60e-07!591;CL:0000680!1.76e-07!57;CL:0000056!1.76e-07!57;CL:0000355!1.76e-07!57;CL:0000222!2.85e-07!119;CL:0000223!3.19e-07!59;CL:0000144!9.43e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0002368;1.51e-18;13!CL:0002076;7.25e-14;42!CL:0002202;1.56e-11;9!CL:0002632;1.56e-11;9!CL:0000244;2.41e-10;4!CL:0000731;2.41e-10;4!CL:1000413;5.82e-10;9!CL:0000071;2.72e-09;18!CL:0000359;1.10e-07;32!CL:0002328;1.46e-07;3!CL:0000307;3.16e-07;3!CL:0002621;5.21e-07;3!CL:0002592;8.68e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.21e-18,42;CL:0002368,2.94e-18,13;CL:0002321,5.60e-15,250;CL:0000223,5.10e-13,58;CL:0002202,1.92e-11,9;CL:0002632,1.92e-11,9;CL:0000244,2.44e-10,4;CL:0000731,2.44e-10,4;CL:1000413,4.55e-10,9;CL:0000066,7.71e-10,253;CL:0000071,2.81e-09,18;CL:0002546,2.81e-09,18;CL:0000359,1.09e-07,32;CL:0002328,1.30e-07,3;CL:0002621,3.39e-07,3;CL:0000068,4.73e-07,3;CL:0000069,4.73e-07,3;CL:0000307,4.73e-07,3;CL:0000377,4.73e-07,3;CL:0002592,6.72e-07,3;CL:0002539,7.95e-07,10;CL:0000076,9.34e-07,63;CL:0000222,9.38e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002546;2.72e-09;18!CL:0000223;2.86e-07;58!CL:0000377;3.16e-07;3 | |||
|ontology_enrichment_disease=DOID:2394!4.76e-08!14;DOID:120!4.81e-08!27;DOID:193!4.92e-07!29 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!7.36e-16!42;UBERON:0003509!7.36e-16!42;UBERON:0004572!7.36e-16!42;UBERON:0004872!3.36e-15!84;UBERON:0001981!9.11e-15!60;UBERON:0007500!9.11e-15!60;UBERON:0004537!9.11e-15!60;UBERON:0006965!9.11e-15!60;UBERON:0004573!2.68e-12!33;UBERON:0004571!2.68e-12!33;UBERON:0000475!2.74e-12!365;UBERON:0000055!1.77e-11!69;UBERON:0002049!2.72e-11!79;UBERON:0007798!2.72e-11!79;UBERON:0000483!5.66e-11!309;UBERON:0000119!1.59e-10!312;UBERON:0000467!1.37e-09!625;UBERON:0000480!1.78e-09!626;UBERON:0000468!2.03e-08!659;UBERON:0004111!2.92e-08!241;UBERON:0003914!4.07e-08!118;UBERON:0000947!5.23e-08!21;UBERON:0010191!5.23e-08!21;UBERON:0004535!9.65e-08!110;UBERON:0000025!9.91e-08!194;UBERON:0000486!1.29e-07!82;UBERON:0003102!2.75e-07!95;UBERON:0001009!3.90e-07!113;UBERON:0000477!4.47e-07!286;UBERON:0000490!4.55e-07!138;UBERON:0000914!6.72e-07!83;UBERON:0002329!6.72e-07!83;UBERON:0003077!6.72e-07!83;UBERON:0003059!6.72e-07!83;UBERON:0007282!6.72e-07!83;UBERON:0009618!6.72e-07!83;UBERON:0007285!6.72e-07!83 | |ontology_enrichment_uberon=UBERON:0001637!7.36e-16!42;UBERON:0003509!7.36e-16!42;UBERON:0004572!7.36e-16!42;UBERON:0004872!3.36e-15!84;UBERON:0001981!9.11e-15!60;UBERON:0007500!9.11e-15!60;UBERON:0004537!9.11e-15!60;UBERON:0006965!9.11e-15!60;UBERON:0004573!2.68e-12!33;UBERON:0004571!2.68e-12!33;UBERON:0000475!2.74e-12!365;UBERON:0000055!1.77e-11!69;UBERON:0002049!2.72e-11!79;UBERON:0007798!2.72e-11!79;UBERON:0000483!5.66e-11!309;UBERON:0000119!1.59e-10!312;UBERON:0000467!1.37e-09!625;UBERON:0000480!1.78e-09!626;UBERON:0000468!2.03e-08!659;UBERON:0004111!2.92e-08!241;UBERON:0003914!4.07e-08!118;UBERON:0000947!5.23e-08!21;UBERON:0010191!5.23e-08!21;UBERON:0004535!9.65e-08!110;UBERON:0000025!9.91e-08!194;UBERON:0000486!1.29e-07!82;UBERON:0003102!2.75e-07!95;UBERON:0001009!3.90e-07!113;UBERON:0000477!4.47e-07!286;UBERON:0000490!4.55e-07!138;UBERON:0000914!6.72e-07!83;UBERON:0002329!6.72e-07!83;UBERON:0003077!6.72e-07!83;UBERON:0003059!6.72e-07!83;UBERON:0007282!6.72e-07!83;UBERON:0009618!6.72e-07!83;UBERON:0007285!6.72e-07!83 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.87e-15;42!UBERON:0003509;6.87e-15;42!UBERON:0004572;6.87e-15;42!UBERON:0004573;4.26e-12;33!UBERON:0004571;4.26e-12;33!UBERON:0007500;1.91e-11;56!UBERON:0001981;1.91e-11;56!UBERON:0004537;1.91e-11;56!UBERON:0000947;4.88e-11;21!UBERON:0010191;4.88e-11;21!UBERON:0000487;6.33e-11;22!UBERON:0000490;7.83e-11;33!UBERON:0003915;5.82e-10;9!UBERON:0004700;5.82e-10;9!UBERON:0001917;5.82e-10;9!UBERON:0004638;2.72e-09;18!UBERON:0001986;2.72e-09;18!UBERON:0004852;2.72e-09;18!UBERON:0006914;2.86e-09;25!UBERON:0000486;1.48e-08;12!UBERON:0000365;3.15e-08;5!UBERON:0007196;3.97e-08;15!UBERON:0001558;3.97e-08;15!UBERON:0004815;1.46e-07;3!UBERON:0002031;1.46e-07;3!UBERON:0002185;3.22e-07;5!UBERON:0001949;5.21e-07;3!UBERON:0000055;5.38e-07;65!UBERON:0005910;8.16e-07;6!UBERON:0003498;8.68e-07;3!UBERON:0005985;8.68e-07;3!UBERON:0001621;8.68e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,4.48e-17,42;UBERON:0003509,4.48e-17,42;UBERON:0004572,4.48e-17,42;UBERON:0007500,1.04e-15,59;UBERON:0001981,1.04e-15,59;UBERON:0004537,1.04e-15,59;UBERON:0006965,1.04e-15,59;UBERON:0004872,1.31e-14,83;UBERON:0004573,1.50e-13,33;UBERON:0004571,1.50e-13,33;UBERON:0000055,1.07e-12,68;UBERON:0000947,3.43e-11,21;UBERON:0010191,3.43e-11,21;UBERON:0000487,6.75e-11,22;UBERON:0002049,3.33e-10,78;UBERON:0007798,3.33e-10,78;UBERON:0003915,4.55e-10,9;UBERON:0004700,4.55e-10,9;UBERON:0001917,4.55e-10,9;UBERON:0004638,2.81e-09,18;UBERON:0001986,2.81e-09,18;UBERON:0004852,2.81e-09,18;UBERON:0006914,3.02e-09,25;UBERON:0003914,9.54e-09,117;UBERON:0000365,3.18e-08,5;UBERON:0007196,5.65e-08,15;UBERON:0001558,5.65e-08,15;UBERON:0004815,1.30e-07,3;UBERON:0002031,1.30e-07,3;UBERON:0004535,1.48e-07,109;UBERON:0001949,3.39e-07,3;UBERON:0001009,3.56e-07,112;UBERON:0002185,4.21e-07,5;UBERON:0001621,6.72e-07,3;UBERON:0004237,7.95e-07,10;UBERON:0004695,7.95e-07,10;UBERON:0002111,7.95e-07,10;UBERON:0004178,7.95e-07,10;UBERON:0005910,8.23e-07,6 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.281908808191942,0,0,2.61701557230111,0,0,0,6.88055022204225,1.39560233594486,0.218441372130172,0.791300934685361,0,0,1.34465029290355,0,1.46062018077475,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0.154816123316076,3.67768489791571,3.614471025339,3.32778609150109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0,0,0.283604451492204,0.886917589850256,0.614843499851882,0,1.09288586487763,4.82019775619758,0,0,0,0,0,0,2.98143611050058,2.58070378531837,1.04142150482278,2.26123176769604,1.67799774483962,1.92582629358047,1.04497483268405,0,0,0,1.20848795132744,0,0,0.367663080345869,0,0,0.22452937262617,0,6.13266549863533,0.949265659568129,2.01521918323448,0,0,8.28578699070815,0.993943903390637,0.759783069987479,1.58891016975863,1.14734648299525,0,0,0,1.2333377420858,0,0.404132016209064,0,0.151357427644931,0,0,0,0,0.747243402759005,0,0.323745888736263,0.140450806702248,0.204154171254893,0.245668634623536,0.206651562351531,0,0,0,0,0.168336113954066,0.250237039743928,0.831192346452549,0.438977620880838,0.30648779579902,0,0.226864366320042,0.358779271377724,0.427114777637135,2.11931901159562,0.600182192168805,1.44273540933814,0,0.744467425326359,1.0126579934476,0.292311015483596,0.504867548488229,2.11714766877288,0.323292113637624,0,0.10075209822764,0.339121184620975,1.93260853163297,4.09119180886252,2.29443676311203,0,0,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0.721879481669586,0,0.168584690078102,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0.343135620597051,6.58501712451753,0,0.201057944823262,1.11106134190236,0,1.03993478527958,0,0,0.352226082707465,0,0,0.190254152234598,0,0,0,0,0,0.93733833986777,28.5569617938061,1.41775097242386,1.61205340865127,2.03443756959773,0.383382679165211,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,1.16344544182,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50719688529793,0,0.299918973546171,0,0,0,0,0,0,1.30303176000821,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,1.49801404789436,0,0,0,0,0,0,0.178428988797162,0,0.585707074963566,0.300946099727719,0,0,0.664225598535437,0.737476674166813,0.347534457872331,0,0,0,0,0,0.303127571446259,3.32870879020994,0.30239029332968,1.24053903909388,0.306923946576125,0,0.128139149255701,1.02341449813341,0.160853921143607,0,0.154209693802656,1.24293207719189,0.0821271560138091,1.55776328755086,0.581051892299796,0,36.8931905358044,0.184161977871793,0.114814448164607,0,0,0,0.462092022626489,0,0,0.316654886678627,0,0,0.215915916102139,1.54227252690289,0.541892875087706,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,3.44559322797703,0.650060246036521,3.21367859688319,0,0,0,0.137836572484531,0.107420244868274,0,0,0.445160178233687,2.31398881505369,2.30628080838127,10.2090169995667,1.0115778085555,0.929691098594572,5.03699754929024,0.6970372701606,2.46426864140871,1.59691809095107,1.73986598415015,0.37064843820784,0.858749320451947,0,0,0,1.02359116524534,0,0.636406495851874,0.78494864019923,0,0.274537029736055,0,2.22400729730648,1.58510321173008,2.52755073743389,0,0.243713489631284,3.16950440270266,0.136499911407986,0.424216295861138,1.13008116620243,0,0,2.19225442626881,0,0,0.608731130888112,0,1.12678241012897,0.143411352204052,0.0982490410131212,0.35667105148125,0,0,0,0,0,3.27155183266741,7.37332503089366,1.08890984861323,0.188287601553558,30.9963868323286,32.0095803768489,29.2663901334206,17.6887018159359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3874448473769,0,4.60741053148848,0,0.140669416410513,0.333926115068718,0,0,0,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0.41827123283581,0,0,0,0,0,0.957003479195758,0.366390373607449,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0,0,0,0,0,0,0,0,0.808813595768125,0,0.234264445725339,0,0,0.242780379534093,0,0,0,0.063186579628488,0,0,0.664653872707185,0,0,0,0,0.138674673013139,1.21491816834592,0.489961987071888,0.69647365264322,0,2.0638323896594,0,0,0.0821154570532092,0.193978032976839,0,0,1.23337732182076,0,0.189932387867636,0,0.0801588202515337,0,0,0,0,0,0,0,0.235694034616795,0.271808412147228,0.313808538937,0.101998217636322,0.577901179803038,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0.179287339332845,0,0,0,0.25426853765475,0,0,0.653174720218818,0,0,0.170388021785422,0,0,0,0.775697738169303,0.52893040697076,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0.638341257770182,0,0.2506898940227,0,0,0,0,0,0,0.573409195690071,0.221858103073705,0.558867626472451,0,0,0,0,0,0,0,0.74627401443437,0.467426619694449,1.66441758450784,0.189403005275089,0,0.889811221596536,1.60188047877847,0.453692771289717,0.15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| ||
|short_description=p9@NDST1 | |short_description=p9@NDST1 | ||
}} | }} |
Latest revision as of 05:11, 16 September 2015
Short description: | p9@NDST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NDST1_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_ENST00000518299_5end |
EntrezGene: | NDST1 |
HGNC: | 7680 |
UniProt: | E5RG24 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.21e-18 | 42 |
respiratory epithelial cell | 2.94e-18 | 13 |
embryonic cell | 5.60e-15 | 250 |
endodermal cell | 5.10e-13 | 58 |
epithelial cell of tracheobronchial tree | 1.92e-11 | 9 |
epithelial cell of lower respiratory tract | 1.92e-11 | 9 |
transitional epithelial cell | 2.44e-10 | 4 |
urothelial cell | 2.44e-10 | 4 |
endothelial cell of artery | 4.55e-10 | 9 |
epithelial cell | 7.71e-10 | 253 |
blood vessel endothelial cell | 2.81e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.81e-09 | 18 |
vascular associated smooth muscle cell | 1.09e-07 | 32 |
bronchial epithelial cell | 1.30e-07 | 3 |
gingival epithelial cell | 3.39e-07 | 3 |
duct epithelial cell | 4.73e-07 | 3 |
branched duct epithelial cell | 4.73e-07 | 3 |
tracheal epithelial cell | 4.73e-07 | 3 |
tracheoblast | 4.73e-07 | 3 |
smooth muscle cell of the coronary artery | 6.72e-07 | 3 |
aortic smooth muscle cell | 7.95e-07 | 10 |
squamous epithelial cell | 9.34e-07 | 63 |
mesodermal cell | 9.38e-07 | 121 |