FFCP PHASE1:Hg19::chrX:67332313..67332323,-: Difference between revisions
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|id=chrX:67332313..67332323,-
|short_description=p17@OPHN1
|description=CAGE_peak_17_at_OPHN1_5end
|association_with_transcript=-49bp_to_ENST00000484842_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4983 | |EntrezGene=4983 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8148 | |HGNC=8148 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-49bp_to_ENST00000484842_5end | |||
|cluster_id=chrX:67332313..67332323,- | |||
|coexpression_cluster_id=C206 | |||
|description=CAGE_peak_17_at_OPHN1_5end | |||
|id=chrX:67332313..67332323,- | |||
|ontology_enrichment_celltype=CL:0000147!6.05e-09!14;CL:0000148!6.86e-09!10;CL:0000541!6.86e-09!10 | |||
|ontology_enrichment_celltype_v019=CL:0000047;5.69e-21;2!CL:0002605;1.83e-14;3!CL:0000128;6.04e-07;7!CL:0000126;6.04e-07;7!CL:0000127;6.04e-07;7!CL:0002319;7.45e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.09e-14,3;CL:0000128,6.39e-07,7;CL:0000126,6.39e-07,7;CL:0000127,6.39e-07,7;CL:0002453,6.39e-07,7;CL:0002319,7.45e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.40e-14;3 | |||
|ontology_enrichment_disease=DOID:1909!3.24e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;3.11e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.11e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0001893!2.11e-27!34;UBERON:0001869!1.01e-25!32;UBERON:0000956!2.09e-25!25;UBERON:0000203!2.09e-25!25;UBERON:0002791!8.33e-25!33;UBERON:0002780!3.94e-22!41;UBERON:0001890!3.94e-22!41;UBERON:0006240!3.94e-22!41;UBERON:0003080!1.61e-21!42;UBERON:0002619!4.82e-21!22;UBERON:0005743!6.78e-21!86;UBERON:0002020!7.56e-21!34;UBERON:0003528!7.56e-21!34;UBERON:0003056!9.03e-20!61;UBERON:0001950!1.28e-19!20;UBERON:0003075!3.13e-19!86;UBERON:0007284!3.13e-19!86;UBERON:0000073!2.24e-18!94;UBERON:0001016!2.24e-18!94;UBERON:0001017!3.54e-18!82;UBERON:0002346!4.02e-18!90;UBERON:0007023!3.13e-17!115;UBERON:0001049!6.97e-15!57;UBERON:0005068!6.97e-15!57;UBERON:0006241!6.97e-15!57;UBERON:0007135!6.97e-15!57;UBERON:0002616!2.98e-14!59;UBERON:0000955!4.67e-13!69;UBERON:0006238!4.67e-13!69;UBERON:0004121!9.99e-13!169;UBERON:0000924!2.83e-12!173;UBERON:0006601!2.83e-12!173;UBERON:0002021!2.84e-12!5;UBERON:0000200!9.82e-11!6;UBERON:0000033!2.04e-08!123;UBERON:0002360!4.71e-08!2;UBERON:0000094!4.71e-08!2;UBERON:0007645!4.71e-08!2;UBERON:0000153!8.16e-08!129;UBERON:0007811!8.16e-08!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;2.74e-09;5!UBERON:0005388;2.74e-09;5!UBERON:0001802;2.74e-09;5!UBERON:0002021;3.22e-09;5!UBERON:0000956;4.41e-07;25!UBERON:0000203;4.41e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.22e-09,5;UBERON:0000966,5.92e-08,6;UBERON:0005388,5.92e-08,6;UBERON:0001802,5.92e-08,6;UBERON:0000956,4.55e-07,25;UBERON:0000203,4.55e-07,25 | |||
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| ||
|short_description=p17@OPHN1 | |||
}} | }} |
Latest revision as of 05:27, 16 September 2015
Short description: | p17@OPHN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_OPHN1_5end |
Coexpression cluster: | C206_melanoma_somatostatinoma_nonsmall_small_neuroblastoma_smallcell_pituitary |
Association with transcript: | -49bp_to_ENST00000484842_5end |
EntrezGene: | OPHN1 |
HGNC: | 8148 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.09e-14 | 3 |
oligodendrocyte | 6.39e-07 | 7 |
macroglial cell | 6.39e-07 | 7 |
astrocyte | 6.39e-07 | 7 |
oligodendrocyte precursor cell | 6.39e-07 | 7 |
neural cell | 7.45e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.22e-09 | 5 |
retina | 5.92e-08 | 6 |
photoreceptor array | 5.92e-08 | 6 |
posterior segment of eyeball | 5.92e-08 | 6 |
cerebral cortex | 4.55e-07 | 25 |
pallium | 4.55e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.11e-21 | 2 |