FFCP PHASE1:Hg19::chr19:14785698..14785707,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84658 | |EntrezGene=84658 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23647 | |HGNC=23647 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BY15 | |UniProt=Q9BY15 | ||
|association_with_transcript=22bp_to_ENST00000253673,ENST00000344373,NM_032571,uc002mzi.3,uc010dzp.2,uc010xnv.1_5end | |association_with_transcript=22bp_to_ENST00000253673,ENST00000344373,NM_032571,uc002mzi.3,uc010dzp.2,uc010xnv.1_5end | ||
|cluster_id=chr19:14785698..14785707,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_EMR3_5end | |description=CAGE_peak_3_at_EMR3_5end | ||
|id=chr19:14785698..14785707,- | |id=chr19:14785698..14785707,- | ||
|ontology_enrichment_celltype=CL:0002057!9.34e-46!42;CL:0000860!2.88e-42!45;CL:0000766!3.35e-42!76;CL:0002194!3.02e-30!63;CL:0000576!3.02e-30!63;CL:0000040!3.02e-30!63;CL:0000559!3.02e-30!63;CL:0002009!3.99e-29!65;CL:0000738!4.01e-27!140;CL:0000839!1.33e-26!70;CL:0000557!3.86e-26!71;CL:0000763!4.52e-26!112;CL:0000049!4.52e-26!112;CL:0000094!9.52e-23!8;CL:0000037!2.19e-20!172;CL:0000566!2.19e-20!172;CL:0002087!4.30e-20!119;CL:0002393!5.58e-19!9;CL:0002397!5.58e-19!9;CL:0002032!8.50e-19!165;CL:0000837!8.50e-19!165;CL:0000988!9.07e-19!182;CL:0000081!3.08e-16!11;CL:0002031!4.89e-16!124;CL:0000775!1.43e-12!3;CL:0000875!7.50e-12!3;CL:0002396!7.50e-12!3;CL:0000771!7.11e-09!2 | |ontology_enrichment_celltype=CL:0002057!9.34e-46!42;CL:0000860!2.88e-42!45;CL:0000766!3.35e-42!76;CL:0002194!3.02e-30!63;CL:0000576!3.02e-30!63;CL:0000040!3.02e-30!63;CL:0000559!3.02e-30!63;CL:0002009!3.99e-29!65;CL:0000738!4.01e-27!140;CL:0000839!1.33e-26!70;CL:0000557!3.86e-26!71;CL:0000763!4.52e-26!112;CL:0000049!4.52e-26!112;CL:0000094!9.52e-23!8;CL:0000037!2.19e-20!172;CL:0000566!2.19e-20!172;CL:0002087!4.30e-20!119;CL:0002393!5.58e-19!9;CL:0002397!5.58e-19!9;CL:0002032!8.50e-19!165;CL:0000837!8.50e-19!165;CL:0000988!9.07e-19!182;CL:0000081!3.08e-16!11;CL:0002031!4.89e-16!124;CL:0000775!1.43e-12!3;CL:0000875!7.50e-12!3;CL:0002396!7.50e-12!3;CL:0000771!7.11e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000094;2.91e-38;8!CL:0000081;9.80e-28;11!CL:0000775;8.77e-27;3!CL:0000875;3.97e-25;3!CL:0002396;3.97e-25;3!CL:0000771;2.55e-18;2!CL:0002393;1.11e-12;6!CL:0002397;1.11e-12;6!CL:0000226;1.02e-11;3!CL:0000842;1.02e-11;3!CL:0000766;6.57e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,2.73e-38,8;CL:0002393,4.86e-32,9;CL:0002397,4.86e-32,9;CL:0000081,9.36e-28,11;CL:0000775,8.77e-27,3;CL:0000875,3.97e-25,3;CL:0002396,3.97e-25,3;CL:0000771,2.66e-18,2;CL:0000766,5.09e-17,72;CL:0000226,1.14e-11,3;CL:0000842,1.14e-11,3;CL:0000738,5.79e-11,136;CL:0000763,1.17e-10,108;CL:0000049,1.17e-10,108;CL:0000860,9.97e-09,42;CL:0002057,9.97e-09,42;CL:0000037,2.19e-08,168;CL:0000988,7.91e-08,177;CL:0000473,1.52e-07,48;CL:0000234,1.52e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.41e-43!102;UBERON:0003061!2.41e-43!102;UBERON:0002193!1.18e-38!112;UBERON:0000178!1.89e-28!15;UBERON:0000179!1.89e-28!15;UBERON:0000463!1.89e-28!15;UBERON:0002371!1.70e-22!80;UBERON:0001474!1.72e-20!86;UBERON:0003081!1.21e-16!216;UBERON:0004765!1.61e-16!101;UBERON:0001434!1.61e-16!101;UBERON:0002405!2.21e-16!115;UBERON:0002204!3.16e-09!167 | |ontology_enrichment_uberon=UBERON:0002390!2.41e-43!102;UBERON:0003061!2.41e-43!102;UBERON:0002193!1.18e-38!112;UBERON:0000178!1.89e-28!15;UBERON:0000179!1.89e-28!15;UBERON:0000463!1.89e-28!15;UBERON:0002371!1.70e-22!80;UBERON:0001474!1.72e-20!86;UBERON:0003081!1.21e-16!216;UBERON:0004765!1.61e-16!101;UBERON:0001434!1.61e-16!101;UBERON:0002405!2.21e-16!115;UBERON:0002204!3.16e-09!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.63e-65;15!UBERON:0000179;2.63e-65;15!UBERON:0000463;2.63e-65;15!UBERON:0002390;5.76e-28;32!UBERON:0002193;6.71e-16;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.98e-65,15;UBERON:0000179,2.98e-65,15;UBERON:0000463,2.98e-65,15;UBERON:0002390,7.00e-24,98;UBERON:0003061,7.00e-24,98;UBERON:0002193,2.07e-21,108;UBERON:0003081,5.53e-10,203;UBERON:0004535,1.86e-07,109;UBERON:0001009,3.29e-07,112 | |||
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| ||
|short_description=p3@EMR3 | |short_description=p3@EMR3 | ||
}} | }} |
Latest revision as of 05:54, 16 September 2015
Short description: | p3@EMR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EMR3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 22bp_to_ENST00000253673, ENST00000344373, NM_032571, uc002mzi.3, uc010dzp.2, uc010xnv.1_5end |
EntrezGene: | EMR3 |
HGNC: | 23647 |
UniProt: | Q9BY15 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 2.73e-38 | 8 |
intermediate monocyte | 4.86e-32 | 9 |
CD14-positive, CD16-positive monocyte | 4.86e-32 | 9 |
blood cell | 9.36e-28 | 11 |
neutrophil | 8.77e-27 | 3 |
non-classical monocyte | 3.97e-25 | 3 |
CD14-low, CD16-positive monocyte | 3.97e-25 | 3 |
eosinophil | 2.66e-18 | 2 |
myeloid leukocyte | 5.09e-17 | 72 |
single nucleate cell | 1.14e-11 | 3 |
mononuclear cell | 1.14e-11 | 3 |
leukocyte | 5.79e-11 | 136 |
myeloid cell | 1.17e-10 | 108 |
common myeloid progenitor | 1.17e-10 | 108 |
classical monocyte | 9.97e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.97e-09 | 42 |
hematopoietic stem cell | 2.19e-08 | 168 |
hematopoietic cell | 7.91e-08 | 177 |
defensive cell | 1.52e-07 | 48 |
phagocyte | 1.52e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
blood | 2.98e-65 | 15 |
haemolymphatic fluid | 2.98e-65 | 15 |
organism substance | 2.98e-65 | 15 |
hematopoietic system | 7.00e-24 | 98 |
blood island | 7.00e-24 | 98 |
hemolymphoid system | 2.07e-21 | 108 |
lateral plate mesoderm | 5.53e-10 | 203 |
cardiovascular system | 1.86e-07 | 109 |
circulatory system | 3.29e-07 | 112 |