FFCP PHASE1:Hg19::chr9:136006379..136006394,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:136006379..136006394,-
|short_description=p20@RALGDS
|description=CAGE_peak_20_at_RALGDS_5end
|association_with_transcript=109bp_to_AK301470_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5900 | |EntrezGene=5900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9842 | |HGNC=9842 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z753 | |UniProt=B7Z753 | ||
|association_with_transcript=109bp_to_AK301470_5end | |||
|cluster_id=chr9:136006379..136006394,- | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_20_at_RALGDS_5end | |||
|id=chr9:136006379..136006394,- | |||
|ontology_enrichment_celltype=CL:0000791!2.27e-34!18;CL:0000789!2.27e-34!18;CL:0002420!2.27e-34!18;CL:0002419!2.27e-34!18;CL:0000790!2.27e-34!18;CL:0000084!3.56e-34!25;CL:0000827!3.56e-34!25;CL:0000838!5.39e-22!52;CL:0000625!1.62e-21!11;CL:0000542!1.84e-21!53;CL:0000051!1.84e-21!53;CL:0000738!2.62e-19!140;CL:0000037!5.26e-15!172;CL:0000566!5.26e-15!172;CL:0000988!1.35e-14!182;CL:0002031!6.75e-14!124;CL:0002087!1.15e-13!119;CL:0002032!5.65e-13!165;CL:0000837!5.65e-13!165;CL:0000624!5.95e-12!6;CL:0000623!2.68e-10!3;CL:0000825!2.68e-10!3;CL:0000767!2.66e-09!3;CL:0000842!6.68e-09!3;CL:0000080!1.82e-07!6;CL:0000224!9.10e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000625;2.41e-63;11!CL:0000791;1.86e-38;18!CL:0000789;1.86e-38;18!CL:0002419;1.86e-38;18!CL:0000084;1.14e-34;25!CL:0000623;1.84e-34;3!CL:0000542;9.50e-16;53!CL:0000767;1.64e-15;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.48e-63,11;CL:0000791,1.39e-38,18;CL:0000789,1.39e-38,18;CL:0002420,1.39e-38,18;CL:0002419,1.39e-38,18;CL:0000790,1.39e-38,18;CL:0000084,8.47e-35,25;CL:0000827,8.47e-35,25;CL:0000623,1.75e-34,3;CL:0000825,1.75e-34,3;CL:0000838,3.57e-29,52;CL:0000542,1.36e-28,53;CL:0000051,1.36e-28,53;CL:0000767,2.21e-15,3;CL:0000738,6.15e-14,136;CL:0002032,2.15e-13,161;CL:0000837,2.15e-13,161;CL:0000037,9.44e-13,168;CL:0002087,3.62e-12,115;CL:0000988,5.34e-12,177;CL:0002031,1.36e-11,120 | |||
|ontology_enrichment_development_v019=CL:0000790;1.86e-38;18!CL:0000051;9.50e-16;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;2.91e-12;1!DOID:0060061;2.91e-12;1!DOID:8691;2.91e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.46e-12,1;DOID:0060061,2.46e-12,1;DOID:8691,2.46e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!6.26e-17!15;UBERON:0000179!6.26e-17!15;UBERON:0000463!6.26e-17!15;UBERON:0002390!3.08e-07!102;UBERON:0003061!3.08e-07!102;UBERON:0002193!7.04e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p20@RALGDS | |||
}} | }} |
Latest revision as of 06:11, 16 September 2015
Short description: | p20@RALGDS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_RALGDS_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | 109bp_to_AK301470_5end |
EntrezGene: | RALGDS |
HGNC: | 9842 |
UniProt: | B7Z753 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.48e-63 | 11 |
mature alpha-beta T cell | 1.39e-38 | 18 |
alpha-beta T cell | 1.39e-38 | 18 |
immature T cell | 1.39e-38 | 18 |
mature T cell | 1.39e-38 | 18 |
immature alpha-beta T cell | 1.39e-38 | 18 |
T cell | 8.47e-35 | 25 |
pro-T cell | 8.47e-35 | 25 |
natural killer cell | 1.75e-34 | 3 |
pro-NK cell | 1.75e-34 | 3 |
lymphoid lineage restricted progenitor cell | 3.57e-29 | 52 |
lymphocyte | 1.36e-28 | 53 |
common lymphoid progenitor | 1.36e-28 | 53 |
basophil | 2.21e-15 | 3 |
leukocyte | 6.15e-14 | 136 |
hematopoietic oligopotent progenitor cell | 2.15e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.15e-13 | 161 |
hematopoietic stem cell | 9.44e-13 | 168 |
nongranular leukocyte | 3.62e-12 | 115 |
hematopoietic cell | 5.34e-12 | 177 |
hematopoietic lineage restricted progenitor cell | 1.36e-11 | 120 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.46e-12 | 1 |
cutaneous T cell lymphoma | 2.46e-12 | 1 |
mycosis fungoides | 2.46e-12 | 1 |