FFCP PHASE1:Hg19::chr12:109747083..109747094,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=121643 | |EntrezGene=121643 | ||
Line 8: | Line 8: | ||
|UniProt=Q96NZ1,A6H901 | |UniProt=Q96NZ1,A6H901 | ||
|association_with_transcript=-58bp_to_ENST00000266856,ENST00000299162,ENST00000355216,NM_213596,uc001toe.3,uc001tof.3_5end | |association_with_transcript=-58bp_to_ENST00000266856,ENST00000299162,ENST00000355216,NM_213596,uc001toe.3,uc001tof.3_5end | ||
|cluster_id=chr12:109747083..109747094,- | |||
|coexpression_cluster_id=C3235 | |coexpression_cluster_id=C3235 | ||
|description=CAGE_peak_2_at_FOXN4_5end | |description=CAGE_peak_2_at_FOXN4_5end |
Latest revision as of 06:37, 16 September 2015
Short description: | p2@FOXN4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FOXN4_5end |
Coexpression cluster: | C3235_gastrointestinal_neuroblastoma_merkel_carcinosarcoma_non_carcinoid_colon |
Association with transcript: | -58bp_to_ENST00000266856, ENST00000299162, ENST00000355216, NM_213596, uc001toe.3, uc001tof.3_5end |
EntrezGene: | FOXN4 |
HGNC: | 21399 |
UniProt: | Q96NZ1A6H901 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@FOXN4 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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Merkel cell | 4.73e-28 | 2 |
keratinocyte | 7.88e-12 | 5 |
stratified squamous epithelial cell | 5.20e-10 | 6 |
keratin accumulating cell | 5.20e-10 | 6 |
stratified epithelial cell | 5.20e-10 | 6 |
keratinizing barrier epithelial cell | 5.20e-10 | 6 |
epithelial fate stem cell | 5.20e-10 | 6 |
stratified epithelial stem cell | 5.20e-10 | 6 |
surface ectodermal cell | 5.20e-10 | 6 |
epithelial cell of large intestine | 4.38e-08 | 2 |
Showing 1 to 10 of 14 entries
Ontology term | p-value | n |
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umbilical cord | 1.68e-12 | 10 |
blastocyst | 1.68e-12 | 10 |
blastula | 1.68e-12 | 10 |
bilaminar disc | 1.68e-12 | 10 |
inner cell mass | 1.68e-12 | 10 |
cleaving embryo | 1.68e-12 | 10 |
connecting stalk | 1.68e-12 | 10 |
inner cell mass derived epiblast | 1.68e-12 | 10 |
extraembryonic mesoderm | 1.68e-12 | 10 |
blood | 1.60e-08 | 15 |
Showing 1 to 10 of 14 entries
Ontology term | p-value | n |
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mixed cell type cancer | 6.15e-08 | 2 |
carcinosarcoma | 6.15e-08 | 2 |
Showing 1 to 2 of 2 entries