FFCP PHASE1:Hg19::chr1:23037323..23037338,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2048 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=3393 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=A6NJM0,Q6NVW1,P29323 | ||
|association_with_transcript=0bp_to_ENST00000374625,ENST00000544305,NM_004442,NM_017449,uc001bge.2,uc001bgf.2,uc009vqj.1,uc010odu.1_5end | |association_with_transcript=0bp_to_ENST00000374625,ENST00000544305,NM_004442,NM_017449,uc001bge.2,uc001bgf.2,uc009vqj.1,uc010odu.1_5end | ||
|cluster_id=chr1:23037323..23037338,+ | |cluster_id=chr1:23037323..23037338,+ | ||
Latest revision as of 07:04, 16 September 2015
| Short description: | p1@EPHB2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_EPHB2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000374625, ENST00000544305, NM_004442, NM_017449, uc001bge.2, uc001bgf.2, uc009vqj.1, uc010odu.1_5end |
| EntrezGene: | EPHB2 |
| HGNC: | 3393 |
| UniProt: | A6NJM0Q6NVW1P29323 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@EPHB2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesodermal cell | 7.46e-25 | 121 |
| embryonic cell | 1.15e-22 | 250 |
| lining cell | 4.90e-17 | 58 |
| barrier cell | 4.90e-17 | 58 |
| endothelial cell | 4.34e-16 | 36 |
| meso-epithelial cell | 1.07e-15 | 45 |
| epithelial cell | 3.85e-14 | 253 |
| endothelial cell of vascular tree | 5.51e-11 | 24 |
| epithelial cell of nephron | 7.69e-11 | 15 |
| blood vessel endothelial cell | 1.29e-09 | 18 |
Showing 1 to 10 of 27 entries
| Ontology term | p-value | n |
|---|---|---|
| anatomical conduit | 3.30e-23 | 240 |
| epithelium | 4.89e-22 | 306 |
| cell layer | 7.01e-22 | 309 |
| embryo | 1.73e-21 | 592 |
| epithelial tube | 9.09e-21 | 117 |
| tube | 1.19e-20 | 192 |
| developing anatomical structure | 1.93e-20 | 581 |
| vasculature | 3.09e-20 | 78 |
| vascular system | 3.09e-20 | 78 |
| vessel | 3.80e-17 | 68 |
Showing 1 to 10 of 72 entries
