FFCP PHASE1:Hg19::chr14:79746425..79746463,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9369 | |EntrezGene=9369 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8010 | |HGNC=8010 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-142bp_to_ENST00000555387_5end | |association_with_transcript=-142bp_to_ENST00000555387_5end | ||
|cluster_id=chr14:79746425..79746463,+ | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_8_at_NRXN3_5end | |description=CAGE_peak_8_at_NRXN3_5end | ||
|id=chr14:79746425..79746463,+ | |id=chr14:79746425..79746463,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002615;1.32e-16;3!CL:0002568;6.42e-13;1!CL:0002581;6.42e-13;1!CL:0000313;6.42e-13;1!CL:0000123;4.29e-07;2!CL:0000159;4.29e-07;2!CL:0000242;4.29e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,1.74e-16,3;CL:0002581,4.23e-13,1;CL:0000313,6.06e-13,1;CL:0002568,7.68e-13,1;CL:0000242,3.93e-07,2;CL:0000159,4.17e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.01e-36;3!UBERON:0005754;2.95e-13;1!UBERON:0007297;2.91e-07;2 | |||
|ontology_enrichment_disease=DOID:2394!8.83e-09!14 | |ontology_enrichment_disease=DOID:2394!8.83e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:2152;6.42e-13;1!DOID:3369;6.42e-13;1!DOID:2394;4.06e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,3.76e-13,1;DOID:2152,6.06e-13,1;DOID:2394,4.06e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.65e-22!57;UBERON:0005068!2.65e-22!57;UBERON:0006241!2.65e-22!57;UBERON:0007135!2.65e-22!57;UBERON:0002616!2.65e-21!59;UBERON:0001017!7.69e-19!82;UBERON:0005743!2.58e-18!86;UBERON:0000955!2.90e-18!69;UBERON:0006238!2.90e-18!69;UBERON:0003075!1.65e-17!86;UBERON:0007284!1.65e-17!86;UBERON:0002780!9.27e-17!41;UBERON:0001890!9.27e-17!41;UBERON:0006240!9.27e-17!41;UBERON:0000073!3.60e-16!94;UBERON:0001016!3.60e-16!94;UBERON:0003080!3.63e-16!42;UBERON:0002346!3.83e-16!90;UBERON:0007023!1.44e-15!115;UBERON:0001893!1.29e-14!34;UBERON:0002791!7.68e-14!33;UBERON:0002020!2.57e-13!34;UBERON:0003528!2.57e-13!34;UBERON:0001869!7.04e-13!32;UBERON:0000956!8.72e-12!25;UBERON:0000203!8.72e-12!25;UBERON:0003056!2.43e-11!61;UBERON:0004121!2.69e-10!169;UBERON:0000924!1.02e-09!173;UBERON:0006601!1.02e-09!173;UBERON:0000033!1.81e-09!123;UBERON:0002619!2.50e-09!22;UBERON:0001950!2.88e-09!20;UBERON:0000064!5.06e-09!219;UBERON:0000153!1.71e-08!129;UBERON:0007811!1.71e-08!129;UBERON:0000025!2.04e-08!194;UBERON:0003076!2.19e-07!15;UBERON:0003057!2.19e-07!15;UBERON:0004111!3.68e-07!241;UBERON:0000062!3.97e-07!511;UBERON:0000991!9.17e-07!21;UBERON:0009196!9.17e-07!21;UBERON:0009117!9.17e-07!21;UBERON:0005564!9.17e-07!21 | |ontology_enrichment_uberon=UBERON:0001049!2.65e-22!57;UBERON:0005068!2.65e-22!57;UBERON:0006241!2.65e-22!57;UBERON:0007135!2.65e-22!57;UBERON:0002616!2.65e-21!59;UBERON:0001017!7.69e-19!82;UBERON:0005743!2.58e-18!86;UBERON:0000955!2.90e-18!69;UBERON:0006238!2.90e-18!69;UBERON:0003075!1.65e-17!86;UBERON:0007284!1.65e-17!86;UBERON:0002780!9.27e-17!41;UBERON:0001890!9.27e-17!41;UBERON:0006240!9.27e-17!41;UBERON:0000073!3.60e-16!94;UBERON:0001016!3.60e-16!94;UBERON:0003080!3.63e-16!42;UBERON:0002346!3.83e-16!90;UBERON:0007023!1.44e-15!115;UBERON:0001893!1.29e-14!34;UBERON:0002791!7.68e-14!33;UBERON:0002020!2.57e-13!34;UBERON:0003528!2.57e-13!34;UBERON:0001869!7.04e-13!32;UBERON:0000956!8.72e-12!25;UBERON:0000203!8.72e-12!25;UBERON:0003056!2.43e-11!61;UBERON:0004121!2.69e-10!169;UBERON:0000924!1.02e-09!173;UBERON:0006601!1.02e-09!173;UBERON:0000033!1.81e-09!123;UBERON:0002619!2.50e-09!22;UBERON:0001950!2.88e-09!20;UBERON:0000064!5.06e-09!219;UBERON:0000153!1.71e-08!129;UBERON:0007811!1.71e-08!129;UBERON:0000025!2.04e-08!194;UBERON:0003076!2.19e-07!15;UBERON:0003057!2.19e-07!15;UBERON:0004111!3.68e-07!241;UBERON:0000062!3.97e-07!511;UBERON:0000991!9.17e-07!21;UBERON:0009196!9.17e-07!21;UBERON:0009117!9.17e-07!21;UBERON:0005564!9.17e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.01e-18;6!UBERON:0003688;4.19e-18;6!UBERON:0002358;4.19e-18;6!UBERON:0003684;4.19e-18;6!UBERON:0001178;4.19e-18;6!UBERON:0000998;2.95e-13;1!UBERON:0006868;2.95e-13;1!UBERON:0004911;6.42e-13;1!UBERON:0002680;1.10e-12;9!UBERON:0001895;1.10e-12;9!UBERON:0004457;2.81e-12;9!UBERON:0000042;2.81e-12;9!UBERON:0004733;1.19e-09;12!UBERON:0002028;1.19e-09;12!UBERON:0004732;6.02e-09;13!UBERON:0004909;4.29e-07;2!UBERON:0005406;4.29e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.02e-18,6;UBERON:0006215,1.02e-18,6;UBERON:0003688,5.96e-18,6;UBERON:0002358,5.96e-18,6;UBERON:0003684,5.96e-18,6;UBERON:0001178,5.96e-18,6;UBERON:0000998,2.95e-13,1;UBERON:0006868,2.95e-13,1;UBERON:0004911,6.06e-13,1;UBERON:0002680,1.10e-12,9;UBERON:0001895,1.10e-12,9;UBERON:0010092,1.10e-12,9;UBERON:0004733,1.19e-09,12;UBERON:0002028,1.19e-09,12;UBERON:0007277,1.19e-09,12;UBERON:0004457,2.84e-09,12;UBERON:0000042,2.84e-09,12;UBERON:0004732,6.03e-09,13;UBERON:0003076,8.08e-08,15;UBERON:0003057,8.08e-08,15;UBERON:0005406,3.48e-07,2;UBERON:0004909,4.17e-07,2 | |||
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| ||
|short_description=p8@NRXN3 | |short_description=p8@NRXN3 | ||
}} | }} |
Latest revision as of 07:05, 16 September 2015
Short description: | p8@NRXN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_NRXN3_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -142bp_to_ENST00000555387_5end |
EntrezGene: | NRXN3 |
HGNC: | 8010 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 1.74e-16 | 3 |
perirenal preadipocyte | 4.23e-13 | 1 |
serous secreting cell | 6.06e-13 | 1 |
mesenchymal stem cell of Wharton's jelly | 7.68e-13 | 1 |
Merkel cell | 3.93e-07 | 2 |
seromucus secreting cell | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.02e-18 | 6 |
rhombic lip | 1.02e-18 | 6 |
omentum | 5.96e-18 | 6 |
peritoneum | 5.96e-18 | 6 |
abdominal cavity | 5.96e-18 | 6 |
visceral peritoneum | 5.96e-18 | 6 |
seminal vesicle | 2.95e-13 | 1 |
seminal fluid secreting gland | 2.95e-13 | 1 |
epithelium of female gonad | 6.06e-13 | 1 |
regional part of metencephalon | 1.10e-12 | 9 |
metencephalon | 1.10e-12 | 9 |
future metencephalon | 1.10e-12 | 9 |
segmental subdivision of hindbrain | 1.19e-09 | 12 |
hindbrain | 1.19e-09 | 12 |
presumptive hindbrain | 1.19e-09 | 12 |
cavity lining | 2.84e-09 | 12 |
serous membrane | 2.84e-09 | 12 |
segmental subdivision of nervous system | 6.03e-09 | 13 |
posterior neural tube | 8.08e-08 | 15 |
chordal neural plate | 8.08e-08 | 15 |
perirenal fat | 3.48e-07 | 2 |
epithelium of gonad | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 3.76e-13 | 1 |
ovary epithelial cancer | 6.06e-13 | 1 |
ovarian cancer | 4.06e-08 | 14 |