FFCP PHASE1:Hg19::chr5:150460914..150460968,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10318 | |EntrezGene=10318 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16903 | |HGNC=16903 | ||
|TSSclassifier=strong | |||
|UniProt=Q15025 | |UniProt=Q15025 | ||
|association_with_transcript=28bp_to_ENST00000389378,uc003ltf.2,uc003ltg.2,uc003lth.2,uc003lti.2,uc010jhr.1,uc011dco.1_5end | |association_with_transcript=28bp_to_ENST00000389378,uc003ltf.2,uc003ltg.2,uc003lth.2,uc003lti.2,uc010jhr.1,uc011dco.1_5end | ||
|cluster_id=chr5:150460914..150460968,- | |||
|description=CAGE_peak_4_at_TNIP1_5end | |description=CAGE_peak_4_at_TNIP1_5end | ||
|id=chr5:150460914..150460968,- | |id=chr5:150460914..150460968,- | ||
|ontology_enrichment_celltype=CL:0000359;3.45e-10;32 | |ontology_enrichment_celltype=CL:0000222!2.08e-11!119;CL:0000359!5.17e-10!32;CL:0000183!1.91e-07!59;CL:0002078!2.48e-07!44;CL:0000220!2.52e-07!246;CL:0002321!4.27e-07!248;CL:0000393!5.75e-07!60;CL:0000211!5.75e-07!60 | ||
| | |ontology_enrichment_celltype_v019=CL:0000359;3.45e-10;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.29e-11,32;CL:0000222,4.27e-11,121;CL:0002078,4.00e-07,45;CL:0000393,8.60e-07,61;CL:0000211,8.60e-07,61;CL:0002539,9.29e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0004573;1.19e-10;33!UBERON:0004571;1.19e-10;33!UBERON:0001637;2.42e-09;42!UBERON:0003509;2.42e-09;42!UBERON:0004572;2.42e-09;42!UBERON:0007500;8.80e-08;56!UBERON:0001981;8.80e-08;56!UBERON:0004537;8.80e-08;56!UBERON:0000055;3.05e-07;65!UBERON:0003914;6.56e-07;74 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.65e-17!84;UBERON:0003914!1.84e-17!118;UBERON:0002049!8.69e-16!79;UBERON:0007798!8.69e-16!79;UBERON:0000025!1.73e-15!194;UBERON:0000055!4.08e-15!69;UBERON:0001981!1.63e-14!60;UBERON:0007500!1.63e-14!60;UBERON:0004537!1.63e-14!60;UBERON:0006965!1.63e-14!60;UBERON:0000119!4.32e-14!312;UBERON:0000483!2.05e-13!309;UBERON:0001637!1.31e-12!42;UBERON:0003509!1.31e-12!42;UBERON:0004572!1.31e-12!42;UBERON:0001009!1.69e-12!113;UBERON:0004111!5.19e-12!241;UBERON:0004535!9.66e-12!110;UBERON:0004573!1.30e-11!33;UBERON:0004571!1.30e-11!33;UBERON:0000477!2.15e-10!286;UBERON:0000490!6.15e-09!138;UBERON:0000468!2.52e-08!659;UBERON:0000922!4.60e-08!612;UBERON:0002050!3.41e-07!605;UBERON:0005423!3.41e-07!605;UBERON:0002385!3.44e-07!63;UBERON:0001015!3.44e-07!63;UBERON:0000383!3.44e-07!63;UBERON:0003081!4.24e-07!216;UBERON:0001134!4.32e-07!61;UBERON:0002036!4.32e-07!61;UBERON:0003082!4.32e-07!61;UBERON:0000923!6.00e-07!604;UBERON:0005291!6.00e-07!604;UBERON:0006598!6.00e-07!604;UBERON:0002532!6.00e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.19e-10;33!UBERON:0004571;1.19e-10;33!UBERON:0001637;2.42e-09;42!UBERON:0003509;2.42e-09;42!UBERON:0004572;2.42e-09;42!UBERON:0007500;8.80e-08;56!UBERON:0001981;8.80e-08;56!UBERON:0004537;8.80e-08;56!UBERON:0000055;3.05e-07;65!UBERON:0003914;6.56e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,6.40e-20,117;UBERON:0004872,1.47e-19,83;UBERON:0002049,4.05e-17,78;UBERON:0007798,4.05e-17,78;UBERON:0000055,7.55e-17,68;UBERON:0007500,3.16e-16,59;UBERON:0001981,3.16e-16,59;UBERON:0004537,3.16e-16,59;UBERON:0006965,3.16e-16,59;UBERON:0000025,1.07e-15,192;UBERON:0001009,7.23e-15,112;UBERON:0001637,2.95e-14,42;UBERON:0003509,2.95e-14,42;UBERON:0004572,2.95e-14,42;UBERON:0004535,6.00e-14,109;UBERON:0004573,1.32e-12,33;UBERON:0004571,1.32e-12,33;UBERON:0000119,6.66e-12,309;UBERON:0000483,3.22e-11,306;UBERON:0004111,4.80e-11,240;UBERON:0003104,6.36e-09,160;UBERON:0009142,6.36e-09,160;UBERON:0003081,2.24e-08,203;UBERON:0000490,1.77e-07,148;UBERON:0005256,2.98e-07,122;UBERON:0004237,9.29e-07,10;UBERON:0004695,9.29e-07,10;UBERON:0002111,9.29e-07,10;UBERON:0004178,9.29e-07,10 | |||
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| ||
|short_description=p4@TNIP1 | |short_description=p4@TNIP1 | ||
}} | }} |
Latest revision as of 07:35, 16 September 2015
Short description: | p4@TNIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TNIP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_ENST00000389378, uc003ltf.2, uc003ltg.2, uc003lth.2, uc003lti.2, uc010jhr.1, uc011dco.1_5end |
EntrezGene: | TNIP1 |
HGNC: | 16903 |
UniProt: | Q15025 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.29e-11 | 32 |
mesodermal cell | 4.27e-11 | 121 |
meso-epithelial cell | 4.00e-07 | 45 |
electrically responsive cell | 8.60e-07 | 61 |
electrically active cell | 8.60e-07 | 61 |
aortic smooth muscle cell | 9.29e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 6.40e-20 | 117 |
splanchnic layer of lateral plate mesoderm | 1.47e-19 | 83 |
vasculature | 4.05e-17 | 78 |
vascular system | 4.05e-17 | 78 |
vessel | 7.55e-17 | 68 |
epithelial tube open at both ends | 3.16e-16 | 59 |
blood vessel | 3.16e-16 | 59 |
blood vasculature | 3.16e-16 | 59 |
vascular cord | 3.16e-16 | 59 |
tube | 1.07e-15 | 192 |
circulatory system | 7.23e-15 | 112 |
artery | 2.95e-14 | 42 |
arterial blood vessel | 2.95e-14 | 42 |
arterial system | 2.95e-14 | 42 |
cardiovascular system | 6.00e-14 | 109 |
systemic artery | 1.32e-12 | 33 |
systemic arterial system | 1.32e-12 | 33 |
cell layer | 6.66e-12 | 309 |
epithelium | 3.22e-11 | 306 |
anatomical conduit | 4.80e-11 | 240 |
mesenchyme | 6.36e-09 | 160 |
entire embryonic mesenchyme | 6.36e-09 | 160 |
lateral plate mesoderm | 2.24e-08 | 203 |
unilaminar epithelium | 1.77e-07 | 148 |
trunk mesenchyme | 2.98e-07 | 122 |
blood vessel smooth muscle | 9.29e-07 | 10 |
arterial system smooth muscle | 9.29e-07 | 10 |
artery smooth muscle tissue | 9.29e-07 | 10 |
aorta smooth muscle tissue | 9.29e-07 | 10 |