FFCP PHASE1:Hg19::chr5:150591663..150591668,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2760 | |EntrezGene=2760 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4367 | |HGNC=4367 | ||
|TSSclassifier=strong | |||
|UniProt=E5RJD0 | |UniProt=E5RJD0 | ||
|association_with_transcript=-42bp_to_ENST00000523466_5end | |association_with_transcript=-42bp_to_ENST00000523466_5end | ||
|cluster_id=chr5:150591663..150591668,+ | |||
|coexpression_cluster_id=C141 | |||
|description=CAGE_peak_20_at_GM2A_5end | |description=CAGE_peak_20_at_GM2A_5end | ||
|id=chr5:150591663..150591668,+ | |id=chr5:150591663..150591668,+ | ||
|ontology_enrichment_celltype=CL:0000838!4.56e-25!52;CL:0000542!1.60e-24!53;CL:0000051!1.60e-24!53;CL:0000738!3.78e-23!140;CL:0002087!8.63e-18!119;CL:0000037!9.49e-18!172;CL:0000566!9.49e-18!172;CL:0002031!7.10e-17!124;CL:0000784!1.17e-16!3;CL:0000988!1.89e-16!182;CL:0000945!2.88e-16!24;CL:0000826!2.88e-16!24;CL:0002032!3.83e-14!165;CL:0000837!3.83e-14!165;CL:0000084!6.02e-12!25;CL:0000827!6.02e-12!25;CL:0002619!9.40e-08!3 | |ontology_enrichment_celltype=CL:0000838!4.56e-25!52;CL:0000542!1.60e-24!53;CL:0000051!1.60e-24!53;CL:0000738!3.78e-23!140;CL:0002087!8.63e-18!119;CL:0000037!9.49e-18!172;CL:0000566!9.49e-18!172;CL:0002031!7.10e-17!124;CL:0000784!1.17e-16!3;CL:0000988!1.89e-16!182;CL:0000945!2.88e-16!24;CL:0000826!2.88e-16!24;CL:0002032!3.83e-14!165;CL:0000837!3.83e-14!165;CL:0000084!6.02e-12!25;CL:0000827!6.02e-12!25;CL:0002619!9.40e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000771;6.85e-14;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,7.30e-14,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!3.52e-24!10;DOID:2531!4.32e-10!51;DOID:0060083!4.32e-10!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;6.13e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,6.28e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.36e-18!7;UBERON:0002370!7.30e-13!4;UBERON:0005058!7.30e-13!4;UBERON:0009113!7.30e-13!4;UBERON:0003295!7.30e-13!4;UBERON:0005562!7.30e-13!4;UBERON:0003351!1.01e-08!6;UBERON:0001042!1.16e-08!10;UBERON:0009145!1.16e-08!10;UBERON:0006562!7.04e-08!11;UBERON:0002106!1.51e-07!3;UBERON:0004854!1.51e-07!3;UBERON:0009034!1.51e-07!3;UBERON:0002095!1.51e-07!3;UBERON:0004782!1.51e-07!3;UBERON:0003281!1.51e-07!3;UBERON:0009664!1.51e-07!3;UBERON:0002296!1.51e-07!3;UBERON:0005602!1.51e-07!3;UBERON:0001179!1.51e-07!3;UBERON:0006293!1.51e-07!3 | |ontology_enrichment_uberon=UBERON:0004177!1.36e-18!7;UBERON:0002370!7.30e-13!4;UBERON:0005058!7.30e-13!4;UBERON:0009113!7.30e-13!4;UBERON:0003295!7.30e-13!4;UBERON:0005562!7.30e-13!4;UBERON:0003351!1.01e-08!6;UBERON:0001042!1.16e-08!10;UBERON:0009145!1.16e-08!10;UBERON:0006562!7.04e-08!11;UBERON:0002106!1.51e-07!3;UBERON:0004854!1.51e-07!3;UBERON:0009034!1.51e-07!3;UBERON:0002095!1.51e-07!3;UBERON:0004782!1.51e-07!3;UBERON:0003281!1.51e-07!3;UBERON:0009664!1.51e-07!3;UBERON:0002296!1.51e-07!3;UBERON:0005602!1.51e-07!3;UBERON:0001179!1.51e-07!3;UBERON:0006293!1.51e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.00e-50;2!UBERON:0005058;4.00e-50;2!UBERON:0009113;4.00e-50;2!UBERON:0004177;8.98e-21;5!UBERON:0005057;8.98e-21;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.66e-26,4;UBERON:0005058,8.66e-26,4;UBERON:0009113,8.66e-26,4;UBERON:0003295,8.66e-26,4;UBERON:0005562,8.66e-26,4;UBERON:0003351,1.44e-17,6;UBERON:0004177,3.29e-15,7;UBERON:0005057,3.29e-15,7;UBERON:0000974,5.98e-11,10;UBERON:0003408,5.98e-11,10;UBERON:0001042,5.98e-11,10;UBERON:0009145,5.98e-11,10;UBERON:0006562,4.83e-10,11;UBERON:0009722,4.83e-10,11;UBERON:0007690,4.83e-10,11 | |||
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|short_description=p20@GM2A | |short_description=p20@GM2A | ||
}} | }} |
Latest revision as of 08:16, 16 September 2015
Short description: | p20@GM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_GM2A_5end |
Coexpression cluster: | C141_Hodgkin_acute_thymus_chronic_vein_CD4_B |
Association with transcript: | -42bp_to_ENST00000523466_5end |
EntrezGene: | GM2A |
HGNC: | 4367 |
UniProt: | E5RJD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 7.30e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 8.66e-26 | 4 |
hemolymphoid system gland | 8.66e-26 | 4 |
thymic region | 8.66e-26 | 4 |
pharyngeal gland | 8.66e-26 | 4 |
thymus primordium | 8.66e-26 | 4 |
pharyngeal epithelium | 1.44e-17 | 6 |
hemopoietic organ | 3.29e-15 | 7 |
immune organ | 3.29e-15 | 7 |
neck | 5.98e-11 | 10 |
gland of gut | 5.98e-11 | 10 |
chordate pharynx | 5.98e-11 | 10 |
pharyngeal region of foregut | 5.98e-11 | 10 |
pharynx | 4.83e-10 | 11 |
entire pharyngeal arch endoderm | 4.83e-10 | 11 |
early pharyngeal endoderm | 4.83e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 6.28e-11 | 10 |