FFCP PHASE1:Hg19::chr17:55333997..55334044,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=124540 | |EntrezGene=124540 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18585 | |HGNC=18585 | ||
|TSSclassifier=strong | |||
|UniProt=Q96DH6 | |UniProt=Q96DH6 | ||
|association_with_transcript=66bp_to_ENST00000284073,NM_138962,uc002iuz.1_5end | |association_with_transcript=66bp_to_ENST00000284073,NM_138962,uc002iuz.1_5end | ||
|cluster_id=chr17:55333997..55334044,+ | |||
|coexpression_cluster_id=C3658 | |||
|description=CAGE_peak_2_at_MSI2_5end | |description=CAGE_peak_2_at_MSI2_5end | ||
|id=chr17:55333997..55334044,+ | |id=chr17:55333997..55334044,+ | ||
|ontology_enrichment_celltype=CL:0000542!1.88e-10!53;CL:0000051!1.88e-10!53;CL:0000838!2.91e-10!52;CL:0000037!3.12e-08!172;CL:0000566!3.12e-08!172;CL:0000791!1.15e-07!18;CL:0000789!1.15e-07!18;CL:0002420!1.15e-07!18;CL:0002419!1.15e-07!18;CL:0000790!1.15e-07!18;CL:0002032!2.09e-07!165;CL:0000837!2.09e-07!165;CL:0000738!2.40e-07!140;CL:0000988!4.45e-07!182;CL:0000084!6.06e-07!25;CL:0000827!6.06e-07!25 | |ontology_enrichment_celltype=CL:0000542!1.88e-10!53;CL:0000051!1.88e-10!53;CL:0000838!2.91e-10!52;CL:0000037!3.12e-08!172;CL:0000566!3.12e-08!172;CL:0000791!1.15e-07!18;CL:0000789!1.15e-07!18;CL:0002420!1.15e-07!18;CL:0002419!1.15e-07!18;CL:0000790!1.15e-07!18;CL:0002032!2.09e-07!165;CL:0000837!2.09e-07!165;CL:0000738!2.40e-07!140;CL:0000988!4.45e-07!182;CL:0000084!6.06e-07!25;CL:0000827!6.06e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.10e-07;18!CL:0000789;1.10e-07;18!CL:0002419;1.10e-07;18!CL:0000084;6.06e-07;25!CL:0000542;8.12e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.46e-10,53;CL:0000051,1.46e-10,53;CL:0000838,2.28e-10,52;CL:0000037,5.51e-08,168;CL:0000791,8.30e-08,18;CL:0000789,8.30e-08,18;CL:0002420,8.30e-08,18;CL:0002419,8.30e-08,18;CL:0000790,8.30e-08,18;CL:0002032,3.73e-07,161;CL:0000837,3.73e-07,161;CL:0000988,3.98e-07,177;CL:0000738,4.43e-07,136;CL:0000084,5.18e-07,25;CL:0000827,5.18e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;1.10e-07;18!CL:0000051;8.12e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.72e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.76e-09,114 | |||
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| ||
|short_description=p2@MSI2 | |short_description=p2@MSI2 | ||
}} | }} |
Latest revision as of 08:52, 16 September 2015
Short description: | p2@MSI2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MSI2_5end |
Coexpression cluster: | C3658_anaplastic_granulocyte_spinal_CD34_seminal_pineal_merkel |
Association with transcript: | 66bp_to_ENST00000284073, NM_138962, uc002iuz.1_5end |
EntrezGene: | MSI2 |
HGNC: | 18585 |
UniProt: | Q96DH6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.46e-10 | 53 |
common lymphoid progenitor | 1.46e-10 | 53 |
lymphoid lineage restricted progenitor cell | 2.28e-10 | 52 |
hematopoietic stem cell | 5.51e-08 | 168 |
mature alpha-beta T cell | 8.30e-08 | 18 |
alpha-beta T cell | 8.30e-08 | 18 |
immature T cell | 8.30e-08 | 18 |
mature T cell | 8.30e-08 | 18 |
immature alpha-beta T cell | 8.30e-08 | 18 |
hematopoietic oligopotent progenitor cell | 3.73e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.73e-07 | 161 |
hematopoietic cell | 3.98e-07 | 177 |
leukocyte | 4.43e-07 | 136 |
T cell | 5.18e-07 | 25 |
pro-T cell | 5.18e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.76e-09 | 114 |