FFCP PHASE1:Hg19::chr9:137582854..137582895,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1289 | |EntrezGene=1289 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2209 | |HGNC=2209 | ||
|TSSclassifier=strong | |||
|UniProt=Q59EE7 | |UniProt=Q59EE7 | ||
|association_with_transcript=67bp_to_AB209864_5end | |association_with_transcript=67bp_to_AB209864_5end | ||
|cluster_id=chr9:137582854..137582895,+ | |||
|coexpression_cluster_id=C396 | |||
|description=CAGE_peak_7_at_COL5A1_5end | |description=CAGE_peak_7_at_COL5A1_5end | ||
|id=chr9:137582854..137582895,+ | |id=chr9:137582854..137582895,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.69e-28!180;CL:0000057!3.01e-20!75;CL:0002334!7.78e-09!12;CL:0000680!1.12e-08!57;CL:0000056!1.12e-08!57;CL:0000355!1.12e-08!57;CL:0000183!1.17e-08!59;CL:0000187!3.03e-08!54;CL:0000222!4.23e-08!119;CL:0000192!2.38e-07!42;CL:0000514!2.38e-07!42;CL:0000144!2.83e-07!625;CL:0002620!4.74e-07!23;CL:0000048!5.58e-07!430;CL:0000393!8.18e-07!60;CL:0000211!8.18e-07!60 | |ontology_enrichment_celltype=CL:0000055!5.69e-28!180;CL:0000057!3.01e-20!75;CL:0002334!7.78e-09!12;CL:0000680!1.12e-08!57;CL:0000056!1.12e-08!57;CL:0000355!1.12e-08!57;CL:0000183!1.17e-08!59;CL:0000187!3.03e-08!54;CL:0000222!4.23e-08!119;CL:0000192!2.38e-07!42;CL:0000514!2.38e-07!42;CL:0000144!2.83e-07!625;CL:0002620!4.74e-07!23;CL:0000048!5.58e-07!430;CL:0000393!8.18e-07!60;CL:0000211!8.18e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000349;5.06e-15;19!CL:0002334;1.42e-11;12!CL:0000134;1.97e-09;55!CL:0000057;3.83e-09;73!CL:0002320;2.31e-08;188!CL:0002620;5.72e-08;23!CL:0000723;8.98e-08;61!CL:0000048;1.22e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.47e-26,76;CL:0000349,5.27e-15,19;CL:0000048,3.16e-13,427;CL:0000723,1.50e-12,433;CL:0000034,1.10e-11,441;CL:0002334,1.66e-11,12;CL:0002320,1.51e-10,361;CL:0000134,1.74e-10,354;CL:0000219,5.69e-09,386;CL:0002620,4.68e-08,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!7.36e-10!84;UBERON:0000478!5.29e-09!24;UBERON:0002385!7.82e-09!63;UBERON:0001015!7.82e-09!63;UBERON:0000383!7.82e-09!63;UBERON:0001134!8.28e-09!61;UBERON:0002036!8.28e-09!61;UBERON:0003082!8.28e-09!61;UBERON:0004290!5.73e-08!70;UBERON:0005631!6.25e-08!14;UBERON:0000158!6.25e-08!14;UBERON:0002049!2.46e-07!79;UBERON:0007798!2.46e-07!79;UBERON:0000914!2.55e-07!83;UBERON:0002329!2.55e-07!83;UBERON:0003077!2.55e-07!83;UBERON:0003059!2.55e-07!83;UBERON:0007282!2.55e-07!83;UBERON:0009618!2.55e-07!83;UBERON:0007285!2.55e-07!83;UBERON:0004923!8.98e-07!57 | |ontology_enrichment_uberon=UBERON:0004872!7.36e-10!84;UBERON:0000478!5.29e-09!24;UBERON:0002385!7.82e-09!63;UBERON:0001015!7.82e-09!63;UBERON:0000383!7.82e-09!63;UBERON:0001134!8.28e-09!61;UBERON:0002036!8.28e-09!61;UBERON:0003082!8.28e-09!61;UBERON:0004290!5.73e-08!70;UBERON:0005631!6.25e-08!14;UBERON:0000158!6.25e-08!14;UBERON:0002049!2.46e-07!79;UBERON:0007798!2.46e-07!79;UBERON:0000914!2.55e-07!83;UBERON:0002329!2.55e-07!83;UBERON:0003077!2.55e-07!83;UBERON:0003059!2.55e-07!83;UBERON:0007282!2.55e-07!83;UBERON:0009618!2.55e-07!83;UBERON:0007285!2.55e-07!83;UBERON:0004923!8.98e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.37e-12;24!UBERON:0005631;7.09e-09;10!UBERON:0000158;7.09e-09;10!UBERON:0004457;1.97e-08;9!UBERON:0000042;1.97e-08;9!UBERON:0001013;2.05e-08;14!UBERON:0003688;2.92e-08;6!UBERON:0002358;2.92e-08;6!UBERON:0003684;2.92e-08;6!UBERON:0001178;2.92e-08;6!UBERON:0002384;1.15e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,2.35e-12,24;UBERON:0002384,6.73e-11,371;UBERON:0005631,1.03e-10,14;UBERON:0000158,1.03e-10,14;UBERON:0001013,2.78e-08,14;UBERON:0003688,3.13e-08,6;UBERON:0002358,3.13e-08,6;UBERON:0003684,3.13e-08,6;UBERON:0001178,3.13e-08,6;UBERON:0004871,8.77e-07,8 | |||
|phase1_expression=3.45188920614058,5.78071414505655,4.08767771878316,5.00366491765652,5.81049422755474,4.36169262050184,7.59899634504932,0,1.04474251279935,0.245733936501509,0,3.9319446983431,4.48403862988371,0,0.662794751455832,1.34465029290355,0,2.92124036154949,0,1.10808952269109,1.22400414746552,0.313454721478088,0,0,1.50651167513763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.02290049474824,1.44575660953827,1.00267582127178,2.89693037921647,9.54343136461319,12.6525066278685,0.189069634328136,0.665188192387692,1.14185221401064,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,1.13061588384802,1.67799774483962,0.550236083880135,0.208994966536811,0,0,0,0.402829317109147,0,0.24406205754817,0.735326160691737,0,0.0892997282840798,0,0,0,0,0.549605231791222,0,0,0,9.93943903390637,1.77282716330412,1.32409180813219,14.9155042789383,3.19201543978521,2.24271040056923,3.20246987189115,5.92002116201184,1.24484414159907,1.75123873690594,1.63461903113459,3.32986340818849,2.88087962239999,0,0.312160076830321,0,0,0.352303495931295,0.161872944368132,0.140450806702248,0.204154171254893,0.491337269247072,0.929932030581889,1.18800285728205,2.96720315134268,1.82032272387605,2.87447256726495,0,1.00094815897571,0.277064115484183,2.19488810440419,0,1.35214253015937,0.680593098960126,5.38168907066586,2.34913127700424,1.69545520927649,7.20218630602566,1.54578793857658,5.41045134095821,3.35010341396862,2.02531598689519,4.28722822709274,4.03894038790583,1.84099797284599,6.14255015911485,6.39017266529906,1.81353776809752,2.03472710772585,0,0,0,0.121973706129595,0,0,0.414644220061482,0,0,0,3.21620469096443,0,0.464367928031979,2.16563844500876,0.354920400119532,0.674338760312407,0.723033089650446,0.882351781859152,1.08939722046203,1.66089433377768,0.404493924480493,0,0,0.738155454624648,2.80483547606892,1.6462960453256,4.41026134156626,0,0.982827216677626,0.590789906681404,0,0,0.343135620597051,0.109750285408626,0,0,0,0,1.03993478527958,0,0.115930404975077,1.40890433082986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0.448524337381443,0,0.2933531432838,4.13669490424889,3.57656445851882,1.690605505112,2.12750493267896,0,0.514414748524284,0,0,2.14466990487221,26.0458370587893,2.46972101034231,0.325736184293735,0.710783897485092,3.16780749173372,1.20575750823834,0.871533458600294,0.199945982364114,0,0,0,0.958499421966331,1.14861935834114,0,0.579125226670317,1.02738161275192,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.981531933753119,0.500170521059677,0,6.65506756898583,12.3116002270042,4.57337003598411,3.16281820480326,2.10662269809403,4.5481500811197,2.0694614258501,0.664225598535437,2.58116835958384,0.347534457872331,1.37060810223918,2.05886054286514,0,0,0,1.21251028578504,6.65741758041988,7.25736703991233,4.21783273291921,5.06424511850606,12.9103643439214,3.58789617915963,7.67560873600055,6.27330292460069,7.42090332224955,3.39261326365842,2.48586415438378,0.574890092096664,3.11552657510173,2.20799719073923,0,0.200506470303285,0,1.14814448164607,0.910455840033585,0.524497659837696,0,0,0,0,0,1.13733384070897,0.170093705276516,0.647747748306418,0,0,0.501689773854853,0,0,0,0.219259876645935,0,0,0.328014645699706,0.325378394664303,0.103041011647722,1.92295876118521,0.577566499444116,0,0.650060246036521,1.6068392984416,0.193341436584244,0.308097234229289,0.460511024178389,0.137836572484531,1.28904293841928,1.59518363305651,0.340906509664404,2.22580089116843,0.495854746082934,0.384380134730212,0.638063562472921,0.2023155617111,1.39453664789186,9.75918275174984,0,0.616067160352178,0,0,0.74129687641568,0.715624433709956,0.372158369359667,2.53103539774981,2.2875623270859,0,1.28381696410176,0.318203247925937,1.56989728039846,0.539617372749944,5.76527762445715,2.12062324222236,0.404364963146632,3.17020642346017,0.842516912477962,0.975267478179181,0.731140468893853,3.16950440270266,0.272999822815972,4.94919011837995,1.13008116620243,0,1.99031692572366,0,0.578775534266688,1.9676842561399,0.811641507850816,0.6196469961995,1.40847801266121,0.430234056612155,2.35797698431491,1.07001315444375,0.354761064070598,2.11107635297664,2.30506425071931,1.51789269506286,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,4.29740072527842,4.15750553165694,3.68592842519078,0,0,0,0,0,0.597743964753209,0.276283915531148,0,0.715880777515084,0,3.11039587661807,0,0,0,0.394573622547734,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0.139423744278603,0.923403102045565,1.36730467016401,0,0,0,4.78501739597879,1.92354946143911,7.99552164027952,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.22206028986725,0,0,0,0,4.81546588379273,0,0,0,0,0,0,0.61214552326098,0.2527463185139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| ||
|short_description=p7@COL5A1 | |short_description=p7@COL5A1 | ||
}} | }} |
Latest revision as of 08:59, 16 September 2015
Short description: | p7@COL5A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_COL5A1_5end |
Coexpression cluster: | C396_Mesenchymal_Chondrocyte_Smooth_Preadipocyte_Placental_Fibroblast_Hepatic |
Association with transcript: | 67bp_to_AB209864_5end |
EntrezGene: | COL5A1 |
HGNC: | 2209 |
UniProt: | Q59EE7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.47e-26 | 76 |
extraembryonic cell | 5.27e-15 | 19 |
multi fate stem cell | 3.16e-13 | 427 |
somatic stem cell | 1.50e-12 | 433 |
stem cell | 1.10e-11 | 441 |
preadipocyte | 1.66e-11 | 12 |
connective tissue cell | 1.51e-10 | 361 |
mesenchymal cell | 1.74e-10 | 354 |
motile cell | 5.69e-09 | 386 |
skin fibroblast | 4.68e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 2.35e-12 | 24 |
connective tissue | 6.73e-11 | 371 |
extraembryonic membrane | 1.03e-10 | 14 |
membranous layer | 1.03e-10 | 14 |
adipose tissue | 2.78e-08 | 14 |
omentum | 3.13e-08 | 6 |
peritoneum | 3.13e-08 | 6 |
abdominal cavity | 3.13e-08 | 6 |
visceral peritoneum | 3.13e-08 | 6 |
somatic layer of lateral plate mesoderm | 8.77e-07 | 8 |