FFCP PHASE1:Hg19::chr2:242052022..242052034,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23178 | |EntrezGene=23178 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17270 | |HGNC=17270 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=166bp_to_ENST00000489256_5end | |association_with_transcript=166bp_to_ENST00000489256_5end | ||
|cluster_id=chr2:242052022..242052034,- | |||
|coexpression_cluster_id=C1224 | |coexpression_cluster_id=C1224 | ||
|description=CAGE_peak_11_at_PASK_5end | |description=CAGE_peak_11_at_PASK_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000838!2.47e-32!52;CL:0000542!1.51e-31!53;CL:0000051!1.51e-31!53;CL:0000791!4.35e-31!18;CL:0000789!4.35e-31!18;CL:0002420!4.35e-31!18;CL:0002419!4.35e-31!18;CL:0000790!4.35e-31!18;CL:0000084!1.45e-26!25;CL:0000827!1.45e-26!25;CL:0002087!1.19e-20!119;CL:0000625!3.52e-20!11;CL:0000738!6.45e-18!140;CL:0002031!1.03e-15!124;CL:0000624!9.15e-15!6;CL:0000037!3.62e-14!172;CL:0000566!3.62e-14!172;CL:0000988!9.65e-13!182;CL:0002032!1.31e-11!165;CL:0000837!1.31e-11!165;CL:0000898!4.42e-08!3;CL:0000842!6.68e-08!3;CL:0000623!2.54e-07!3;CL:0000825!2.54e-07!3;CL:0002619!8.56e-07!3 | |ontology_enrichment_celltype=CL:0000838!2.47e-32!52;CL:0000542!1.51e-31!53;CL:0000051!1.51e-31!53;CL:0000791!4.35e-31!18;CL:0000789!4.35e-31!18;CL:0002420!4.35e-31!18;CL:0002419!4.35e-31!18;CL:0000790!4.35e-31!18;CL:0000084!1.45e-26!25;CL:0000827!1.45e-26!25;CL:0002087!1.19e-20!119;CL:0000625!3.52e-20!11;CL:0000738!6.45e-18!140;CL:0002031!1.03e-15!124;CL:0000624!9.15e-15!6;CL:0000037!3.62e-14!172;CL:0000566!3.62e-14!172;CL:0000988!9.65e-13!182;CL:0002032!1.31e-11!165;CL:0000837!1.31e-11!165;CL:0000898!4.42e-08!3;CL:0000842!6.68e-08!3;CL:0000623!2.54e-07!3;CL:0000825!2.54e-07!3;CL:0002619!8.56e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;7.13e-57;18!CL:0000789;7.13e-57;18!CL:0002419;7.13e-57;18!CL:0000084;2.21e-40;25!CL:0000625;1.15e-31;11!CL:0000624;1.94e-31;6!CL:0000226;2.31e-22;3!CL:0000842;2.31e-22;3!CL:0000542;1.01e-14;53!CL:0000898;5.27e-11;3!CL:0000895;3.72e-09;1!CL:0000946;5.92e-09;1!CL:0000786;5.92e-09;1 | |ontology_enrichment_celltype_v019=CL:0000791;7.13e-57;18!CL:0000789;7.13e-57;18!CL:0002419;7.13e-57;18!CL:0000084;2.21e-40;25!CL:0000625;1.15e-31;11!CL:0000624;1.94e-31;6!CL:0000226;2.31e-22;3!CL:0000842;2.31e-22;3!CL:0000542;1.01e-14;53!CL:0000898;5.27e-11;3!CL:0000895;3.72e-09;1!CL:0000946;5.92e-09;1!CL:0000786;5.92e-09;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.82e-57,18;CL:0000789,4.82e-57,18;CL:0002420,4.82e-57,18;CL:0002419,4.82e-57,18;CL:0000790,4.82e-57,18;CL:0000084,1.67e-40,25;CL:0000827,1.67e-40,25;CL:0000838,1.44e-33,52;CL:0000542,7.06e-33,53;CL:0000051,7.06e-33,53;CL:0000625,8.94e-32,11;CL:0000624,1.67e-31,6;CL:0000226,6.03e-22,3;CL:0000842,6.03e-22,3;CL:0002087,1.87e-19,115;CL:0000738,6.25e-16,136;CL:0002031,1.03e-12,120;CL:0000037,3.06e-12,168;CL:0000988,1.93e-11,177;CL:0000898,4.21e-11,3;CL:0000810,3.87e-09,1;CL:0000895,3.87e-09,1;CL:0002436,3.87e-09,1;CL:0002427,3.87e-09,1;CL:0002428,3.87e-09,1;CL:0002429,3.87e-09,1;CL:0002433,3.87e-09,1;CL:0002431,3.87e-09,1;CL:0002432,3.87e-09,1;CL:0000946,4.89e-09,1;CL:0000786,4.89e-09,1;CL:0000980,4.89e-09,1;CL:0002032,9.82e-09,161;CL:0000837,9.82e-09,161 | |||
|ontology_enrichment_development_v019=CL:0000790;7.13e-57;18!CL:0000051;1.01e-14;53!CL:0002427;3.72e-09;1 | |ontology_enrichment_development_v019=CL:0000790;7.13e-57;18!CL:0000051;1.01e-14;53!CL:0002427;3.72e-09;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;3.72e-09;1!DOID:0050177;3.72e-09;1!DOID:0050427;3.72e-09;1 | |ontology_enrichment_disease_v019=DOID:630;3.72e-09;1!DOID:0050177;3.72e-09;1!DOID:0050427;3.72e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:630,3.58e-09,1;DOID:0050177,3.58e-09,1;DOID:0050427,3.58e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!7.72e-11!7;UBERON:0002106!2.00e-07!3;UBERON:0004854!2.00e-07!3;UBERON:0009034!2.00e-07!3;UBERON:0002095!2.00e-07!3;UBERON:0004782!2.00e-07!3;UBERON:0003281!2.00e-07!3;UBERON:0009664!2.00e-07!3;UBERON:0002296!2.00e-07!3;UBERON:0005602!2.00e-07!3;UBERON:0001179!2.00e-07!3;UBERON:0006293!2.00e-07!3 | |ontology_enrichment_uberon=UBERON:0004177!7.72e-11!7;UBERON:0002106!2.00e-07!3;UBERON:0004854!2.00e-07!3;UBERON:0009034!2.00e-07!3;UBERON:0002095!2.00e-07!3;UBERON:0004782!2.00e-07!3;UBERON:0003281!2.00e-07!3;UBERON:0009664!2.00e-07!3;UBERON:0002296!2.00e-07!3;UBERON:0005602!2.00e-07!3;UBERON:0001179!2.00e-07!3;UBERON:0006293!2.00e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;5.92e-09;1!UBERON:0001961;5.92e-09;1!UBERON:0001744;5.92e-09;1!UBERON:0001042;5.92e-09;1!UBERON:0001735;5.92e-09;1 | |ontology_enrichment_uberon_v019=UBERON:0002372;5.92e-09;1!UBERON:0001961;5.92e-09;1!UBERON:0001744;5.92e-09;1!UBERON:0001042;5.92e-09;1!UBERON:0001735;5.92e-09;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,5.28e-09,1;UBERON:0001961,5.28e-09,1;UBERON:0001744,5.28e-09,1;UBERON:0001735,5.28e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68109492645493,0.985207073399349,1.49550484495991,0.393364276848904,0,0,0,0,0,0,0.426507697462265,0.293600439334847,0,0.601633342410425,0.651032612147555,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0.560508562981536,0,2.360517241366,3.14408610199332,2.2616164889946,0,0.651844533267181,2.36723902867367,0,0.668462741311041,1.76763544484902,1.55073726208535,0.270803863765016,0.128091319725675,0.390178042679635,0.328875809207352,0,0,1.33457906845854,0.535081656179426,1.04535523804977,0.226618685395132,6.51474839123266,12.026960591892,4.30133476433155,1.27426165729639,1.95325036156926,0,0.602300476311091,0.895906278080929,1.24930726552346,2.13099526839615,1.64225599384209,1.81446068902259,0.534880391567015,1.30341963494519,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.646882724578552,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.2942852049117,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.952927101831156,0.411362273086194,0,0,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0.251932747854276,0,0,0,0,0.179021174675609,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0.583209226766509,0,0.885741385813839,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.992332043623902,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7656157013387,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.469919589899268,0.193373663920732,10.2939390602677,0,0,0.0802413666891683,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.124149428591716,0,0,0,0,0,2.62673006756891,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,6.73193833836789 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68109492645493,0.985207073399349,1.49550484495991,0.393364276848904,0,0,0,0,0,0,0.426507697462265,0.293600439334847,0,0.601633342410425,0.651032612147555,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0.560508562981536,0,2.360517241366,3.14408610199332,2.2616164889946,0,0.651844533267181,2.36723902867367,0,0.668462741311041,1.76763544484902,1.55073726208535,0.270803863765016,0.128091319725675,0.390178042679635,0.328875809207352,0,0,1.33457906845854,0.535081656179426,1.04535523804977,0.226618685395132,6.51474839123266,12.026960591892,4.30133476433155,1.27426165729639,1.95325036156926,0,0.602300476311091,0.895906278080929,1.24930726552346,2.13099526839615,1.64225599384209,1.81446068902259,0.534880391567015,1.30341963494519,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.646882724578552,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.2942852049117,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.952927101831156,0.411362273086194,0,0,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0.251932747854276,0,0,0,0,0.179021174675609,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0.583209226766509,0,0.885741385813839,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0.992332043623902,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7656157013387,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.469919589899268,0.193373663920732,10.2939390602677,0,0,0.0802413666891683,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0.124149428591716,0,0,0,0,0,2.62673006756891,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,6.73193833836789 | ||
|short_description=p11@PASK | |short_description=p11@PASK | ||
}} | }} |
Latest revision as of 09:33, 16 September 2015
Short description: | p11@PASK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PASK_5end |
Coexpression cluster: | C1224_CD4_xeroderma_splenic_CD8_Peripheral_Natural_lymph |
Association with transcript: | 166bp_to_ENST00000489256_5end |
EntrezGene: | PASK |
HGNC: | 17270 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tonsil | 5.28e-09 | 1 |
mucosa-associated lymphoid tissue | 5.28e-09 | 1 |
lymphoid tissue | 5.28e-09 | 1 |
tonsillar ring | 5.28e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 3.58e-09 | 1 |
monogenic disease | 3.58e-09 | 1 |
xeroderma pigmentosum | 3.58e-09 | 1 |