FFCP PHASE1:Hg19::chr12:111806785..111806803,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:111806785..111806803,- to FFCP PHASE1:Hg19::chr12:111806785..111806803,-: NSchange) |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=144717 | |EntrezGene=144717 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26509 | |HGNC=26509 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=22bp_to_ENST00000392658_5end | |||
|cluster_id=chr12:111806785..111806803,- | |||
|description=CAGE_peak_4_at_FAM109A_5end | |||
|id=chr12:111806785..111806803,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0001014;2.84e-22;2!CL:0001016;2.84e-22;2!CL:0000840;1.90e-16;5!CL:0002616;9.60e-12;1!CL:0000990;3.68e-11;8!CL:0000453;1.76e-09;5!CL:0000451;3.15e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.66e-22,2;CL:0001016,1.66e-22,2;CL:0000840,1.71e-16,5;CL:0001029,1.71e-16,5;CL:0002616,6.26e-12,1;CL:0000990,3.43e-11,8;CL:0000453,1.42e-09,5;CL:0000451,2.98e-09,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.87e-09;4!UBERON:0005409;1.36e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.92e-09,4;UBERON:0003124,5.19e-07,7;UBERON:0005409,9.07e-07,25 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,1.0007329835313,0,1.74467704820074,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0.223915474239924,0,0.257575567634187,0.145398238779565,0.755751887377619,0.485168122375632,0.232429036905685,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0.633765858935825,0.425208599930087,0.628975936525128,0.22465726229299,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0.853460445133014,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0,0.12786256184353,0,0.50133791063589,0,0,0,0,0,0,0.392937226493138,0,0,0,0.870648686496336,1.19662164466979,0,0,0,0.198762407366705,1.72046919021225,0.694281003215189,0,0.419499436209906,0.275118041940067,0.626984899610432,0.516833518338658,0,0.33472061276467,2.01414658554573,0,0.488124115096339,0.367663080345869,0,0,0,0.112611480483322,0,0,0.549605231791222,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0.298897361103602,0.117434498643765,0,0,0,0,0,0,0.741800787835671,0,0,0,0,0,0,0,0.300476117813194,0.340296549480063,0.179389635688862,0.213557388818567,0.211931901159562,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0.545492241181669,0.286804595389004,0,0.265059536642971,0.232387885739037,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0.368965315629341,0,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0.16798212819886,0,0,0,0,0,0,0.621984346622316,0.432359860250884,0.12624243342638,0,0,0,0,0.205654985406647,0,0,0,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0.215627574859517,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0,0,0,0.106727557803444,0,3.32870879020994,0,0.496215615637554,0,0.280660094433074,0.128139149255701,0,0.321707842287215,0,0.154209693802656,0.355123450626254,0,0,0.116210378459959,0.725156697549733,0.40101294060657,0.184161977871793,0,0.364182336013434,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0.0890320356467374,0.165284915360978,0,0.255225424989168,0,0,0,0,0.308033580176089,0,0,0.74129687641568,0.143124886741991,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0.808729926293264,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0,0.633322905892992,0.329294892959902,0,0,0.0962221127255121,0,0,0.0941438007767792,0.43050537267123,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0.121360521749513,0,0,0.71623345421307,0,0,0,0,0.111308705022906,0,0,0,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.457987967009312,1.5991043280559,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.973033209536731,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,0,0,2.41981432097328,0.30607276163049,0.063186579628488,0,0,0,1.323967823502,0.313932918407225,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.640358984218058,0.19980960958213,0.144090417154106,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0.599037001496973,0,0,0.268733889946905,0,0,0.236349546921671,0.0824158583811665,0.0674035438541849,0.196854963029498,0,0,0,0,0.137539436597234,0,1.799791132412,10.0594254092533,0.121499113316049,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0.864221491201268,0,0,0,0.340776043570843,0,0.146552233678082,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0.244052529803926,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0.449803112163605,0,0,0,1.04349012362347,0.150257608997218,0.380805212168795,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0.398594520940089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0.3062454773532,0.0642292250964595,0,0,0.41023272848151,0.252071696221718,0.138314504928436,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0.591424344868181,0.0675375846183947,0,0,0,0.546974809018219,0,0.992422356778588,0,0.127762427639595,0,0,0,0,0.443511850813194,0,0,0,0.197318320688547,0,0.111231401892069,0.156986185701028,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0.31020638566432,0,0,0.098150233615243,0.121917924982269,0,0.102662806856247,1.1598144313382,0,0,0,0,0,0,0,3.24131464053368,1.5299169235277,0.470317296361523,0,0,0,0,0,0,0.469919589899268,0.0644578879735772,0,0,0,0.0802413666891683,2.19100916473955,0,0.143339583151451,0,0.203974470572744,0,0.5290268405154,0,0,0,0,0.109265571963696,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0.103432995861895,0,0.23806443146374,0,0.0620747142958579,0,0,0.202117188958219,0,0,0,0.143444410785353,0.665320713092027,0.0814032686109745,0,0,0.0898252021065869,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,1.0007329835313,0,1.74467704820074,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0.223915474239924,0,0.257575567634187,0.145398238779565,0.755751887377619,0.485168122375632,0.232429036905685,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0.633765858935825,0.425208599930087,0.628975936525128,0.22465726229299,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0.853460445133014,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0,0.12786256184353,0,0.50133791063589,0,0,0,0,0,0,0.392937226493138,0,0,0,0.870648686496336,1.19662164466979,0,0,0,0.198762407366705,1.72046919021225,0.694281003215189,0,0.419499436209906,0.275118041940067,0.626984899610432,0.516833518338658,0,0.33472061276467,2.01414658554573,0,0.488124115096339,0.367663080345869,0,0,0,0.112611480483322,0,0,0.549605231791222,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0.163461903113459,0,0,0,0,0,0.298897361103602,0.117434498643765,0,0,0,0,0,0,0.741800787835671,0,0,0,0,0,0,0,0.300476117813194,0.340296549480063,0.179389635688862,0.213557388818567,0.211931901159562,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0.545492241181669,0.286804595389004,0,0.265059536642971,0.232387885739037,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0.368965315629341,0,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0.297262324577456,0,0.16798212819886,0,0,0,0,0,0,0.621984346622316,0.432359860250884,0.12624243342638,0,0,0,0,0.205654985406647,0,0,0,0,0.22001485746285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0.215627574859517,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0.195801157462741,0,0,0,0.106727557803444,0,3.32870879020994,0,0.496215615637554,0,0.280660094433074,0.128139149255701,0,0.321707842287215,0,0.154209693802656,0.355123450626254,0,0,0.116210378459959,0.725156697549733,0.40101294060657,0.184161977871793,0,0.364182336013434,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0.0890320356467374,0.165284915360978,0,0.255225424989168,0,0,0,0,0.308033580176089,0,0,0.74129687641568,0.143124886741991,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0.808729926293264,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0,0.633322905892992,0.329294892959902,0,0,0.0962221127255121,0,0,0.0941438007767792,0.43050537267123,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0.121360521749513,0,0,0.71623345421307,0,0,0,0,0.111308705022906,0,0,0,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.457987967009312,1.5991043280559,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.973033209536731,0.611030144933625,0,0,0,0.134802265961354,0,0,0,0,0,0,2.41981432097328,0.30607276163049,0.063186579628488,0,0,0,1.323967823502,0.313932918407225,0,0,0,0.173559738335131,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.640358984218058,0.19980960958213,0.144090417154106,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0.599037001496973,0,0,0.268733889946905,0,0,0.236349546921671,0.0824158583811665,0.0674035438541849,0.196854963029498,0,0,0,0,0.137539436597234,0,1.799791132412,10.0594254092533,0.121499113316049,0,0,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0.864221491201268,0,0,0,0.340776043570843,0,0.146552233678082,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0.244052529803926,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0.449803112163605,0,0,0,1.04349012362347,0.150257608997218,0.380805212168795,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0.398594520940089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0.3062454773532,0.0642292250964595,0,0,0.41023272848151,0.252071696221718,0.138314504928436,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0.591424344868181,0.0675375846183947,0,0,0,0.546974809018219,0,0.992422356778588,0,0.127762427639595,0,0,0,0,0.443511850813194,0,0,0,0.197318320688547,0,0.111231401892069,0.156986185701028,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0.31020638566432,0,0,0.098150233615243,0.121917924982269,0,0.102662806856247,1.1598144313382,0,0,0,0,0,0,0,3.24131464053368,1.5299169235277,0.470317296361523,0,0,0,0,0,0,0.469919589899268,0.0644578879735772,0,0,0,0.0802413666891683,2.19100916473955,0,0.143339583151451,0,0.203974470572744,0,0.5290268405154,0,0,0,0,0.109265571963696,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0.103432995861895,0,0.23806443146374,0,0.0620747142958579,0,0,0.202117188958219,0,0,0,0.143444410785353,0.665320713092027,0.0814032686109745,0,0,0.0898252021065869,0,0.122241444182866,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p4@FAM109A | |||
}} | }} |
Latest revision as of 09:43, 16 September 2015
Short description: | p4@FAM109A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAM109A_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_ENST00000392658_5end |
EntrezGene: | FAM109A |
HGNC: | 26509 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.66e-22 | 2 |
immature CD1a-positive Langerhans cell | 1.66e-22 | 2 |
immature conventional dendritic cell | 1.71e-16 | 5 |
common dendritic progenitor | 1.71e-16 | 5 |
perirenal adipocyte cell | 6.26e-12 | 1 |
conventional dendritic cell | 3.43e-11 | 8 |
Langerhans cell | 1.42e-09 | 5 |
dendritic cell | 2.98e-09 | 10 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.92e-09 | 4 |
chorion | 5.19e-07 | 7 |
gastrointestinal system | 9.07e-07 | 25 |