FFCP PHASE1:Hg19::chr1:117530211..117530214,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:117530211..117530214,+ to FFCP PHASE1:Hg19::chr1:117530211..117530214,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5738 | |EntrezGene=5738 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9601 | |HGNC=9601 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=172bp_to_AK024785_5end | |||
|cluster_id=chr1:117530211..117530214,+ | |||
|description=CAGE_peak_3_at_PTGFRN_5end | |||
|id=chr1:117530211..117530214,+ | |||
|ontology_enrichment_celltype=CL:0000220!4.20e-17!246;CL:0002321!5.81e-17!248;CL:0000066!2.45e-15!254;CL:0000221!5.78e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002494;7.56e-07;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.64e-14,250;CL:0000066,3.27e-12,253;CL:0002494,4.36e-07,16 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.07e-13!659;UBERON:0007100!1.34e-10!27;UBERON:0000467!1.60e-10!625;UBERON:0000480!2.87e-10!626;UBERON:0003914!3.40e-10!118;UBERON:0003103!3.56e-10!69;UBERON:0000922!3.80e-10!612;UBERON:0004872!1.25e-09!84;UBERON:0002050!1.61e-09!605;UBERON:0005423!1.61e-09!605;UBERON:0000948!2.18e-09!24;UBERON:0005498!2.18e-09!24;UBERON:0004140!2.18e-09!24;UBERON:0009881!2.18e-09!24;UBERON:0004141!2.18e-09!24;UBERON:0003084!2.18e-09!24;UBERON:0007005!2.18e-09!24;UBERON:0004139!2.18e-09!24;UBERON:0004291!2.18e-09!24;UBERON:0000923!3.28e-09!604;UBERON:0005291!3.28e-09!604;UBERON:0006598!3.28e-09!604;UBERON:0002532!3.28e-09!604;UBERON:0000481!4.39e-09!347;UBERON:0000483!6.86e-09!309;UBERON:0000119!9.97e-09!312;UBERON:0000486!4.15e-08!82;UBERON:0001048!1.46e-07!168;UBERON:0000475!7.60e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;4.32e-10;25!UBERON:0000948;6.77e-09;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.88e-11,27;UBERON:0003103,1.56e-10,68;UBERON:0000948,3.96e-10,24;UBERON:0005498,3.96e-10,24;UBERON:0004140,3.96e-10,24;UBERON:0009881,3.96e-10,24;UBERON:0004141,3.96e-10,24;UBERON:0003084,3.96e-10,24;UBERON:0007005,3.96e-10,24;UBERON:0004139,3.96e-10,24;UBERON:0004291,3.96e-10,24;UBERON:0003914,5.86e-10,117;UBERON:0004872,1.32e-08,83;UBERON:0000486,7.30e-08,83;UBERON:0005423,3.17e-07,581;UBERON:0001048,3.22e-07,160;UBERON:0000922,6.61e-07,592 | |||
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| ||
|short_description=p3@PTGFRN | |||
}} | }} |
Latest revision as of 09:57, 16 September 2015
Short description: | p3@PTGFRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PTGFRN_5end |
Coexpression cluster: | NA |
Association with transcript: | 172bp_to_AK024785_5end |
EntrezGene: | PTGFRN |
HGNC: | 9601 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.64e-14 | 250 |
epithelial cell | 3.27e-12 | 253 |
cardiocyte | 4.36e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.88e-11 | 27 |
compound organ | 1.56e-10 | 68 |
heart | 3.96e-10 | 24 |
primitive heart tube | 3.96e-10 | 24 |
primary heart field | 3.96e-10 | 24 |
anterior lateral plate mesoderm | 3.96e-10 | 24 |
heart tube | 3.96e-10 | 24 |
heart primordium | 3.96e-10 | 24 |
cardiac mesoderm | 3.96e-10 | 24 |
cardiogenic plate | 3.96e-10 | 24 |
heart rudiment | 3.96e-10 | 24 |
epithelial tube | 5.86e-10 | 117 |
splanchnic layer of lateral plate mesoderm | 1.32e-08 | 83 |
multilaminar epithelium | 7.30e-08 | 83 |
developing anatomical structure | 3.17e-07 | 581 |
primordium | 3.22e-07 | 160 |
embryo | 6.61e-07 | 592 |