FFCP PHASE1:Hg19::chrX:7811211..7811213,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26609 | |EntrezGene=26609 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12667 | |HGNC=12667 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H320 | |UniProt=Q9H320 | ||
|association_with_transcript=-5bp_to_AF159129_5end | |association_with_transcript=-5bp_to_AF159129_5end | ||
|cluster_id=chrX:7811211..7811213,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_VCX_5end | |description=CAGE_peak_1_at_VCX_5end | ||
|id=chrX:7811211..7811213,+ | |id=chrX:7811211..7811213,+ | ||
|ontology_enrichment_celltype=CL:0000054!1.17e-20!2;CL:0000137!1.17e-20!2;CL:0000092!1.17e-20!2 | |ontology_enrichment_celltype=CL:0000054!1.17e-20!2;CL:0000137!1.17e-20!2;CL:0000092!1.17e-20!2 | ||
|ontology_enrichment_celltype_v019=CL:1000415;2.02e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,2.02e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.16e-09;10!UBERON:0005564;6.16e-09;10 | |||
|ontology_enrichment_disease=DOID:1036!2.80e-31!8;DOID:200!1.17e-20!2;DOID:4305!1.17e-20!2;DOID:2531!1.34e-14!51;DOID:0060083!1.34e-14!51;DOID:2355!2.18e-11!1;DOID:0060085!4.44e-11!1;DOID:3165!4.44e-11!1;DOID:0060121!4.44e-11!1;DOID:2438!4.44e-11!1;DOID:4418!4.44e-11!1;DOID:0050619!5.43e-11!1;DOID:1357!5.43e-11!1;DOID:1240!8.16e-09!39;DOID:8692!5.18e-08!31;DOID:201!1.68e-07!6;DOID:0060100!1.68e-07!6;DOID:162!3.59e-07!235;DOID:0050686!4.80e-07!137;DOID:14566!5.68e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:1036;5.75e-23;8!DOID:2355;6.98e-21;1!DOID:74;3.89e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,5.97e-23,8;DOID:2355,9.43e-21,1;DOID:74,4.52e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001282!1.31e-11!1;UBERON:0009842!1.31e-11!1;UBERON:0003704!1.31e-11!1;UBERON:0001171!1.31e-11!1;UBERON:0001172!1.31e-11!1;UBERON:0001301!4.91e-11!1;UBERON:0001764!5.43e-11!1;UBERON:0001825!5.43e-11!1;UBERON:0003135!8.20e-09!11;UBERON:0002294!8.37e-07!7;UBERON:0001173!8.37e-07!7;UBERON:0004912!8.37e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;3.82e-21;1!UBERON:0009842;3.82e-21;1!UBERON:0003704;3.82e-21;1!UBERON:0001171;3.82e-21;1!UBERON:0001172;3.82e-21;1!UBERON:0002294;2.06e-12;7!UBERON:0001173;2.06e-12;7!UBERON:0000473;6.13e-11;8!UBERON:0003135;3.31e-08;11!UBERON:0002110;4.84e-08;3!UBERON:0001280;6.13e-08;3!UBERON:0004647;6.13e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,3.45e-21,1;UBERON:0009842,3.45e-21,1;UBERON:0003704,3.45e-21,1;UBERON:0001171,3.45e-21,1;UBERON:0001172,3.45e-21,1;UBERON:0000473,5.98e-11,8;UBERON:0002294,7.08e-10,9;UBERON:0001173,7.08e-10,9;UBERON:0004912,7.08e-10,9;UBERON:0003135,3.25e-08,11;UBERON:0002110,4.84e-08,3;UBERON:0006242,4.84e-08,3;UBERON:0001280,5.93e-08,3;UBERON:0004647,5.93e-08,3;UBERON:0005171,5.93e-08,3 | |||
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|short_description=p1@VCX | |short_description=p1@VCX | ||
}} | }} |
Latest revision as of 11:56, 16 September 2015
Short description: | p1@VCX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VCX_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -5bp_to_AF159129_5end |
EntrezGene: | VCX |
HGNC: | 12667 |
UniProt: | Q9H320 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 2.02e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 3.45e-21 | 1 |
acinus | 3.45e-21 | 1 |
intrahepatic bile duct | 3.45e-21 | 1 |
portal lobule | 3.45e-21 | 1 |
hepatic acinus | 3.45e-21 | 1 |
testis | 5.98e-11 | 8 |
biliary system | 7.08e-10 | 9 |
biliary tree | 7.08e-10 | 9 |
biliary bud | 7.08e-10 | 9 |
male reproductive organ | 3.25e-08 | 11 |
gallbladder | 4.84e-08 | 3 |
gall bladder primordium | 4.84e-08 | 3 |
liver parenchyma | 5.93e-08 | 3 |
liver lobule | 5.93e-08 | 3 |
hepatic duct | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 5.97e-23 | 8 |
anemia | 9.43e-21 | 1 |
hematopoietic system disease | 4.52e-11 | 2 |