FFCP PHASE1:Hg19::chr1:235324821..235324849,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23029 | |EntrezGene=23029 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28965 | |HGNC=28965 | ||
|TSSclassifier=strong | |||
|UniProt=P42696 | |UniProt=P42696 | ||
|association_with_transcript=-49bp_to_ENST00000408888,uc001hwn.2,uc001hwo.2,uc010pxp.1_5end | |association_with_transcript=-49bp_to_ENST00000408888,uc001hwn.2,uc001hwo.2,uc010pxp.1_5end | ||
|cluster_id=chr1:235324821..235324849,- | |||
|coexpression_cluster_id=C1042 | |coexpression_cluster_id=C1042 | ||
|description=CAGE_peak_4_at_RBM34_5end | |description=CAGE_peak_4_at_RBM34_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000624!6.17e-11!6;CL:0000791!7.40e-10!18;CL:0000789!7.40e-10!18;CL:0002420!7.40e-10!18;CL:0002419!7.40e-10!18;CL:0000790!7.40e-10!18;CL:0000738!5.48e-08!140;CL:0000094!1.83e-07!8 | |ontology_enrichment_celltype=CL:0000624!6.17e-11!6;CL:0000791!7.40e-10!18;CL:0000789!7.40e-10!18;CL:0002420!7.40e-10!18;CL:0002419!7.40e-10!18;CL:0000790!7.40e-10!18;CL:0000738!5.48e-08!140;CL:0000094!1.83e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000624;1.18e-30;6!CL:0000791;3.99e-25;18!CL:0000789;3.99e-25;18!CL:0002419;3.99e-25;18!CL:0000623;5.38e-22;3!CL:0000084;8.77e-18;25!CL:0000898;1.22e-10;3!CL:0000226;1.55e-10;3!CL:0000842;1.55e-10;3!CL:0000542;4.12e-09;53!CL:0000895;6.50e-09;1!CL:0000094;1.24e-08;8!CL:0000222;2.64e-08;1 | |ontology_enrichment_celltype_v019=CL:0000624;1.18e-30;6!CL:0000791;3.99e-25;18!CL:0000789;3.99e-25;18!CL:0002419;3.99e-25;18!CL:0000623;5.38e-22;3!CL:0000084;8.77e-18;25!CL:0000898;1.22e-10;3!CL:0000226;1.55e-10;3!CL:0000842;1.55e-10;3!CL:0000542;4.12e-09;53!CL:0000895;6.50e-09;1!CL:0000094;1.24e-08;8!CL:0000222;2.64e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.51e-30,6;CL:0000791,4.26e-25,18;CL:0000789,4.26e-25,18;CL:0002420,4.26e-25,18;CL:0002419,4.26e-25,18;CL:0000790,4.26e-25,18;CL:0000623,5.39e-22,3;CL:0000825,5.39e-22,3;CL:0000084,9.18e-18,25;CL:0000827,9.18e-18,25;CL:0000838,5.04e-15,52;CL:0000542,1.05e-14,53;CL:0000051,1.05e-14,53;CL:0000738,1.08e-13,136;CL:0002087,3.36e-11,115;CL:0000898,1.34e-10,3;CL:0000226,1.55e-10,3;CL:0000842,1.55e-10,3;CL:0000037,1.93e-10,168;CL:0000988,9.75e-10,177;CL:0000810,6.50e-09,1;CL:0000895,6.50e-09,1;CL:0002436,6.50e-09,1;CL:0002427,6.50e-09,1;CL:0002428,6.50e-09,1;CL:0002429,6.50e-09,1;CL:0002433,6.50e-09,1;CL:0002431,6.50e-09,1;CL:0002432,6.50e-09,1;CL:0000094,1.03e-08,8;CL:0002032,2.14e-08,161;CL:0000837,2.14e-08,161;CL:0002031,9.69e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000790;3.99e-25;18!CL:0000051;4.12e-09;53!CL:0002427;6.50e-09;1!UBERON:0008801;2.64e-08;1 | |ontology_enrichment_development_v019=CL:0000790;3.99e-25;18!CL:0000051;4.12e-09;53!CL:0002427;6.50e-09;1!UBERON:0008801;2.64e-08;1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001831;2.64e-08;1!UBERON:0001567;2.64e-08;1 | |ontology_enrichment_uberon_v019=UBERON:0001831;2.64e-08;1!UBERON:0001567;2.64e-08;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,3.79e-08,1;UBERON:0001567,3.79e-08,1;UBERON:0008801,3.79e-08,1 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,1.96682138424452,0.383829398097213,0.464448369948228,0,0,0,0.0774672005803016,0.142169232487422,0,2.76997704265939,3.00816671205213,0.868043482863407,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0.612167784741805,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0,0.605399502633369,0.368277635987565,0.632924774881769,0,0.425208599930087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,7.86839080455332,4.71612915298998,3.08402248499264,0,1.30368906653436,2.8406868344084,3.89653456815823,0,0.589211814949674,0.664601683750863,0.541607727530031,0.128091319725675,0,0,0.276350017785848,0.289803085735052,1.92772532110679,1.60524496853828,0,0,5.3650869104269,1.37450978193052,0.506039384039006,0.318565414324097,0,0,0.451725357233318,0,0,0,0,3.83052812126992,3.20928234940209,3.47578569318718,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0,0,0,0,0,0,0,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,1.57624608161542,2.15627574859517,2.18183161675572,0,0,0,0,0,1.49801404789436,0,0.828831026872071,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,0.862856803274467,3.30855429190677,0,0,0.30239029332968,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0.139423744278603,0,0.227884111694002,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0.284609546029793,0,0,0.195984794828755,0.261177619741208,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0.160317640503067,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0.157566364614447,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0.157054096250234,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0.303859956177382,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0.471878893390961,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0.098150233615243,0.121917924982269,0,0,0,0,0,0.198950775161368,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641930933513346,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0,0,0,0.112131862580613,0,0,0,0,0,0.215166616178029,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,1.96682138424452,0.383829398097213,0.464448369948228,0,0,0,0.0774672005803016,0.142169232487422,0,2.76997704265939,3.00816671205213,0.868043482863407,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0.612167784741805,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0,0.605399502633369,0.368277635987565,0.632924774881769,0,0.425208599930087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,7.86839080455332,4.71612915298998,3.08402248499264,0,1.30368906653436,2.8406868344084,3.89653456815823,0,0.589211814949674,0.664601683750863,0.541607727530031,0.128091319725675,0,0,0.276350017785848,0.289803085735052,1.92772532110679,1.60524496853828,0,0,5.3650869104269,1.37450978193052,0.506039384039006,0.318565414324097,0,0,0.451725357233318,0,0,0,0,3.83052812126992,3.20928234940209,3.47578569318718,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0,0,0,0,0,0,0,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,1.57624608161542,2.15627574859517,2.18183161675572,0,0,0,0,0,1.49801404789436,0,0.828831026872071,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44737618286021,0.862856803274467,3.30855429190677,0,0,0.30239029332968,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0.139423744278603,0,0.227884111694002,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0.284609546029793,0,0,0.195984794828755,0.261177619741208,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0.160317640503067,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0.157566364614447,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0.157054096250234,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0.303859956177382,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0.471878893390961,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0.098150233615243,0.121917924982269,0,0,0,0,0,0.198950775161368,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641930933513346,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0,0,0,0.112131862580613,0,0,0,0,0,0.215166616178029,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@RBM34 | |short_description=p4@RBM34 | ||
}} | }} |
Latest revision as of 12:16, 16 September 2015
Short description: | p4@RBM34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RBM34_5end |
Coexpression cluster: | C1042_Eosinophils_CD8_CD4_Natural_CD14_thymus_Peripheral |
Association with transcript: | -49bp_to_ENST00000408888, uc001hwn.2, uc001hwo.2, uc010pxp.1_5end |
EntrezGene: | RBM34 |
HGNC: | 28965 |
UniProt: | P42696 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
parotid gland | 3.79e-08 | 1 |
cheek | 3.79e-08 | 1 |
parotid gland primordium | 3.79e-08 | 1 |