FFCP PHASE1:Hg19::chr7:134653818..134653846,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=800 | |EntrezGene=800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1441 | |HGNC=1441 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-418bp_to_AJ223812_5end | |association_with_transcript=-418bp_to_AJ223812_5end | ||
|cluster_id=chr7:134653818..134653846,+ | |||
|coexpression_cluster_id=C320 | |coexpression_cluster_id=C320 | ||
|description=CAGE_peak_26_at_CALD1_5end | |description=CAGE_peak_26_at_CALD1_5end | ||
|id=chr7:134653818..134653846,+ | |id=chr7:134653818..134653846,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.38e-19!180;CL:0000057!1.58e-11!75;CL:0000680!7.28e-09!57;CL:0000056!7.28e-09!57;CL:0000355!7.28e-09!57;CL:0000187!3.55e-08!54;CL:0002620!1.37e-07!23;CL:0000192!1.87e-07!42;CL:0000514!1.87e-07!42;CL:0000359!2.07e-07!32;CL:0000393!7.88e-07!60;CL:0000211!7.88e-07!60 | |ontology_enrichment_celltype=CL:0000055!3.38e-19!180;CL:0000057!1.58e-11!75;CL:0000680!7.28e-09!57;CL:0000056!7.28e-09!57;CL:0000355!7.28e-09!57;CL:0000187!3.55e-08!54;CL:0002620!1.37e-07!23;CL:0000192!1.87e-07!42;CL:0000514!1.87e-07!42;CL:0000359!2.07e-07!32;CL:0000393!7.88e-07!60;CL:0000211!7.88e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000134;1.14e-11;55!CL:0000048;2.09e-10;58!CL:0000723;2.63e-09;61!CL:0002620;6.14e-09;23!CL:0000034;6.87e-08;69!CL:0002559;2.45e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.97e-15,76;CL:0000048,2.87e-10,427;CL:0000723,9.53e-10,433;CL:0000034,4.42e-09,441;CL:0002620,5.25e-09,23;CL:0000192,4.65e-08,43;CL:0000514,4.65e-08,43;CL:0002559,2.14e-07,5;CL:0000136,3.52e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.65e-07!14 | |ontology_enrichment_disease=DOID:2394!5.65e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.44e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.45e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.11e-12!83;UBERON:0002329!2.11e-12!83;UBERON:0003077!2.11e-12!83;UBERON:0003059!2.11e-12!83;UBERON:0007282!2.11e-12!83;UBERON:0009618!2.11e-12!83;UBERON:0007285!2.11e-12!83;UBERON:0005256!1.09e-10!143;UBERON:0000486!1.62e-10!82;UBERON:0004290!8.95e-10!70;UBERON:0000468!1.06e-09!659;UBERON:0002385!6.40e-09!63;UBERON:0001015!6.40e-09!63;UBERON:0000383!6.40e-09!63;UBERON:0003102!1.16e-08!95;UBERON:0000475!1.36e-08!365;UBERON:0002199!2.70e-08!45;UBERON:0002416!2.70e-08!45;UBERON:0001134!2.80e-08!61;UBERON:0002036!2.80e-08!61;UBERON:0003082!2.80e-08!61;UBERON:0000467!1.23e-07!625;UBERON:0000480!1.71e-07!626;UBERON:0002100!1.83e-07!216;UBERON:0004872!2.12e-07!84;UBERON:0002097!4.72e-07!40 | |ontology_enrichment_uberon=UBERON:0000914!2.11e-12!83;UBERON:0002329!2.11e-12!83;UBERON:0003077!2.11e-12!83;UBERON:0003059!2.11e-12!83;UBERON:0007282!2.11e-12!83;UBERON:0009618!2.11e-12!83;UBERON:0007285!2.11e-12!83;UBERON:0005256!1.09e-10!143;UBERON:0000486!1.62e-10!82;UBERON:0004290!8.95e-10!70;UBERON:0000468!1.06e-09!659;UBERON:0002385!6.40e-09!63;UBERON:0001015!6.40e-09!63;UBERON:0000383!6.40e-09!63;UBERON:0003102!1.16e-08!95;UBERON:0000475!1.36e-08!365;UBERON:0002199!2.70e-08!45;UBERON:0002416!2.70e-08!45;UBERON:0001134!2.80e-08!61;UBERON:0002036!2.80e-08!61;UBERON:0003082!2.80e-08!61;UBERON:0000467!1.23e-07!625;UBERON:0000480!1.71e-07!626;UBERON:0002100!1.83e-07!216;UBERON:0004872!2.12e-07!84;UBERON:0002097!4.72e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;6.18e-10;6!UBERON:0002358;6.18e-10;6!UBERON:0003684;6.18e-10;6!UBERON:0001178;6.18e-10;6!UBERON:0001135;1.97e-07;15!UBERON:0002073;2.45e-07;5!UBERON:0002384;5.41e-07;198!UBERON:0002097;6.01e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.04e-10,6;UBERON:0002358,6.04e-10,6;UBERON:0003684,6.04e-10,6;UBERON:0001178,6.04e-10,6;UBERON:0002097,8.55e-09,41;UBERON:0002199,2.91e-08,46;UBERON:0002416,2.91e-08,46;UBERON:0002073,2.14e-07,5;UBERON:0005086,2.14e-07,5;UBERON:0001135,2.45e-07,15 | |||
|phase1_expression=5.81370813665781,5.78071414505655,5.07435854745496,15.0109947529696,3.5756887554183,16.574431957907,5.06599756336621,0.631719873426831,0.522371256399677,0,0,0,0,0.495065411840187,0.994192127183747,4.03395087871065,4.21886169616784,3.65155045193687,6.8310591830671,0,0,0.313454721478088,1.43117993565528,0.821246550437305,1.38096903554283,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.15076305659177,0.722878304769133,1.50401373190767,1.44846518960824,0,0.486634870302636,0.661743720148475,2.66075276955077,0.87834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0.417989933073621,0.258416759169329,0,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0.44905874525234,0,0,0,0.366403487860815,0,0,0,8.44852317882041,2.27934920996244,1.85372853138506,2.58152958673932,2.83734705758686,2.80338800071154,2.1349799145941,1.48000529050296,0,0.269421344139376,0.653847612453835,0,1.72852777344,0,0.624320153660641,0,1.19558944441441,0.23486899728753,0.161872944368132,0.421352420106746,0.204154171254893,0.61417158655884,0,1.18800285728205,4.94533858557114,0,0,0.673344455816265,0.375355559615893,0,0.877955241761676,7.35570709917647,2.40380894250555,0.907457465280168,3.94657198515496,2.77624605464138,3.81477422087211,1.50045548042201,0.824420233907511,6.44101350114073,2.41951913231067,1.18143432568886,1.16924406193438,2.27190396819703,1.47279837827679,1.13152239773168,3.55009592516614,1.91428986632517,1.52604533079439,0.773043412653187,0.545492241181669,0.286804595389004,0.365921118388786,0,0.348581828608555,0.310983165046111,0.252320850875628,0.72995471815166,3.12899064659632,14.7945415784364,1.38134921352481,2.78620756819187,3.60939740834793,0.591534000199219,0.337169380156203,0.723033089650446,0.55146986366197,0.435758888184812,0.71181185733329,0.269662616320329,0.392442930250692,0,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0,0.686271241194102,0.658501712451753,0,0.804231779293047,0.462942225792648,0,0,2.88662684050547,0.463721619900307,0.352226082707465,0.144366447761074,0.462985512576611,1.71228737011138,0,0,0,0,0,0.93733833986777,2.35174979478403,0.992425680696705,0.716468181622786,0.290633938513962,0.383382679165211,0,0,0,0,0,0.253991577168676,0,0,0,0.308482478109971,0.300343057843917,0,0,0,0.22001485746285,2.71470603091333,0,0.845302752556,11.4353390131494,3.12022310734098,0,1.41849132023278,0,1.57275793023962,0.542621605391443,0,0.65147236858747,1.06617584622764,0,0.904318131178758,0,2.19940580600526,0,0,0,1.19812427745791,1.14861935834114,0,1.15825045334063,0.410952645100767,0.895304816199478,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,1.00034104211935,0,7.07100929204744,6.24501460790066,3.31175071571263,2.6942525448324,0.601892199455438,0,0,2.65690239414175,1.47495334833363,0.955719759148911,0.195801157462741,0,0,0,0,0,1.66435439510497,0.907170879989041,3.96972492510043,5.06424511850606,4.77122160536225,5.38184426873944,7.16390148693385,8.5252578206112,4.45254199334973,0.462629081407967,0.710246901252508,0.246381468041427,0,0.348631135379878,0.120859449591622,2.00506470303285,0.184161977871793,0.574072240823034,0.728364672026868,1.04899531967539,0,0.539107359730903,0,0,0.422206515571503,0,0,1.0795795805107,0,0,0,0,0,0.223874754722178,0,0,0,0,0.650756789328606,0.309123034943167,0.457847324091717,0.247528499761764,0,0,1.6068392984416,0.676695028044854,0.462145851343933,0.460511024178389,0.275673144969061,0.751941714077915,0.580066775656914,0.511359764496605,0.178064071293475,0.826424576804891,0.768760269460425,0.127612712494584,0.910420027699949,2.32422774648643,1.88887408098384,0,0.616067160352178,0,0,0.18532421910392,0.143124886741991,0.372158369359667,1.58189712359363,1.33441135746677,0,2.1396949401696,0.318203247925937,0.78494864019923,2.15846949099978,1.09814811894422,1.17812402345686,0,3.17020642346017,1.68503382495592,0,0.487426979262569,1.05650146756755,1.36499911407986,1.55545975149084,1.13008116620243,0.551365343546124,0.66343897524122,2.63070531152258,0,0.655894752046633,0.202910376962704,1.239293992399,0.563391205064483,0.573645408816206,1.17898849215745,1.07001315444375,0,0.844430541190656,0.658589785919804,0.379473173765715,0,0.192444225451024,0,0,0.564862804660675,0,1.68471475667626,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.95497793895076,0.296964680832639,0.614321404198464,0,0.281338832821026,0,0,0,1.79323189425963,0.276283915531148,0,0.409074730008619,0,12.7526230941341,0,0,0,2.17015492401254,0,0,0,0.278304294485554,0,0,0,1.44999915086959,0.1137934482855,0,0,0,0,0.694499979733169,0,0.120596438625408,0,0.221158519862449,0.295547618953547,0.438770794307945,0.10893846351899,0,1.07730361905316,1.70913083770502,0,0.3590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| ||
|short_description=p26@CALD1 | |short_description=p26@CALD1 | ||
}} | }} |
Latest revision as of 12:36, 16 September 2015
Short description: | p26@CALD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_CALD1_5end |
Coexpression cluster: | C320_Olfactory_Ewing_smooth_hepatic_Hair_Mesenchymal_Preadipocyte |
Association with transcript: | -418bp_to_AJ223812_5end |
EntrezGene: | CALD1 |
HGNC: | 1441 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.97e-15 | 76 |
multi fate stem cell | 2.87e-10 | 427 |
somatic stem cell | 9.53e-10 | 433 |
stem cell | 4.42e-09 | 441 |
skin fibroblast | 5.25e-09 | 23 |
smooth muscle cell | 4.65e-08 | 43 |
smooth muscle myoblast | 4.65e-08 | 43 |
hair follicle cell | 2.14e-07 | 5 |
fat cell | 3.52e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 6.04e-10 | 6 |
peritoneum | 6.04e-10 | 6 |
abdominal cavity | 6.04e-10 | 6 |
visceral peritoneum | 6.04e-10 | 6 |
skin of body | 8.55e-09 | 41 |
integument | 2.91e-08 | 46 |
integumental system | 2.91e-08 | 46 |
hair follicle | 2.14e-07 | 5 |
hair follicle placode | 2.14e-07 | 5 |
smooth muscle tissue | 2.45e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.45e-09 | 14 |