FFCP PHASE1:Hg19::chr20:44519987..44519999,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5476 | |EntrezGene=5476 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9251 | |HGNC=9251 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JZH0 | |UniProt=Q5JZH0 | ||
|association_with_transcript=6bp_to_ENST00000419493_5end | |association_with_transcript=6bp_to_ENST00000419493_5end | ||
|cluster_id=chr20:44519987..44519999,+ | |||
|coexpression_cluster_id=C1750 | |coexpression_cluster_id=C1750 | ||
|description=CAGE_peak_3_at_CTSA_5end | |description=CAGE_peak_3_at_CTSA_5end | ||
|id=chr20:44519987..44519999,+ | |id=chr20:44519987..44519999,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.84e-14!180;CL:0000048!1.75e-10!430;CL:0002371!2.42e-10!591;CL:0000144!5.37e-10!625;CL:0000057!1.44e-09!75;CL:0000723!3.53e-09!436;CL:0000222!7.57e-09!119;CL:0000548!8.27e-09!679;CL:0000004!8.27e-09!679;CL:0000255!8.27e-09!679;CL:0002194!1.20e-08!63;CL:0000576!1.20e-08!63;CL:0000040!1.20e-08!63;CL:0000559!1.20e-08!63;CL:0000012!1.43e-08!682;CL:0000034!4.49e-08!444;CL:0002320!7.04e-08!365;CL:0002009!1.96e-07!65;CL:0000183!5.80e-07!59 | |ontology_enrichment_celltype=CL:0000055!2.84e-14!180;CL:0000048!1.75e-10!430;CL:0002371!2.42e-10!591;CL:0000144!5.37e-10!625;CL:0000057!1.44e-09!75;CL:0000723!3.53e-09!436;CL:0000222!7.57e-09!119;CL:0000548!8.27e-09!679;CL:0000004!8.27e-09!679;CL:0000255!8.27e-09!679;CL:0002194!1.20e-08!63;CL:0000576!1.20e-08!63;CL:0000040!1.20e-08!63;CL:0000559!1.20e-08!63;CL:0000012!1.43e-08!682;CL:0000034!4.49e-08!444;CL:0002320!7.04e-08!365;CL:0002009!1.96e-07!65;CL:0000183!5.80e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000134;1.92e-07;55!CL:0000473;7.96e-07;39!CL:0000234;7.96e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.28e-10,427;CL:0000057,6.23e-10,76;CL:0000222,2.22e-09,121;CL:0000723,4.47e-09,433;CL:0002194,3.97e-08,59;CL:0000576,3.97e-08,59;CL:0000040,3.97e-08,59;CL:0000559,3.97e-08,59;CL:0000034,5.88e-08,441;CL:0002320,1.46e-07,361;CL:0002009,5.44e-07,61;CL:0000473,8.20e-07,48;CL:0000234,8.20e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!2.92e-14!448;UBERON:0004120!2.92e-14!448;UBERON:0006603!2.92e-14!448;UBERON:0002204!5.40e-12!167;UBERON:0003081!8.60e-12!216;UBERON:0000468!1.36e-10!659;UBERON:0000480!7.95e-10!626;UBERON:0000467!1.45e-09!625;UBERON:0002405!6.78e-09!115;UBERON:0002384!7.31e-08!375;UBERON:0000062!9.59e-08!511;UBERON:0003914!1.40e-07!118;UBERON:0004765!5.15e-07!101;UBERON:0001434!5.15e-07!101;UBERON:0001474!5.51e-07!86;UBERON:0002371!8.04e-07!80 | |ontology_enrichment_uberon=UBERON:0000926!2.92e-14!448;UBERON:0004120!2.92e-14!448;UBERON:0006603!2.92e-14!448;UBERON:0002204!5.40e-12!167;UBERON:0003081!8.60e-12!216;UBERON:0000468!1.36e-10!659;UBERON:0000480!7.95e-10!626;UBERON:0000467!1.45e-09!625;UBERON:0002405!6.78e-09!115;UBERON:0002384!7.31e-08!375;UBERON:0000062!9.59e-08!511;UBERON:0003914!1.40e-07!118;UBERON:0004765!5.15e-07!101;UBERON:0001434!5.15e-07!101;UBERON:0001474!5.51e-07!86;UBERON:0002371!8.04e-07!80 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,6.17e-15,315;UBERON:0004120,6.17e-15,315;UBERON:0006603,6.17e-15,315;UBERON:0002204,1.21e-12,167;UBERON:0003081,9.62e-12,203;UBERON:0002384,1.51e-07,371;UBERON:0003914,2.47e-07,117;UBERON:0001434,2.59e-07,100;UBERON:0004765,6.55e-07,90 | |||
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| ||
|short_description=p3@CTSA | |short_description=p3@CTSA | ||
}} | }} |
Latest revision as of 13:00, 16 September 2015
Short description: | p3@CTSA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CTSA_5end |
Coexpression cluster: | C1750_Monocytederived_Fibroblast_Mesenchymal_Smooth_Macrophage_CD14_Pericytes |
Association with transcript: | 6bp_to_ENST00000419493_5end |
EntrezGene: | CTSA |
HGNC: | 9251 |
UniProt: | Q5JZH0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.28e-10 | 427 |
fibroblast | 6.23e-10 | 76 |
mesodermal cell | 2.22e-09 | 121 |
somatic stem cell | 4.47e-09 | 433 |
monopoietic cell | 3.97e-08 | 59 |
monocyte | 3.97e-08 | 59 |
monoblast | 3.97e-08 | 59 |
promonocyte | 3.97e-08 | 59 |
stem cell | 5.88e-08 | 441 |
connective tissue cell | 1.46e-07 | 361 |
macrophage dendritic cell progenitor | 5.44e-07 | 61 |
defensive cell | 8.20e-07 | 48 |
phagocyte | 8.20e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 6.17e-15 | 315 |
mesoderm-derived structure | 6.17e-15 | 315 |
presumptive mesoderm | 6.17e-15 | 315 |
musculoskeletal system | 1.21e-12 | 167 |
lateral plate mesoderm | 9.62e-12 | 203 |
connective tissue | 1.51e-07 | 371 |
epithelial tube | 2.47e-07 | 117 |
skeletal system | 2.59e-07 | 100 |
skeletal element | 6.55e-07 | 90 |