FFCP PHASE1:Hg19::chr10:116444371..116444382,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:116444371..116444382,-
|short_description=p19@ABLIM1
|description=CAGE_peak_19_at_ABLIM1_5end
|association_with_transcript=31bp_to_ENST00000369252,ENST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3983 | |EntrezGene=3983 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=78 | |HGNC=78 | ||
|UniProt=A6NKJ2, | |TSSclassifier=strong | ||
|UniProt=A6NKJ2,F8W8M4,B3KSG3,B3KVH2,O14639 | |||
|association_with_transcript=31bp_to_ENST00000369252,ENST00000369267,ENST00000533213,NM_001003407,NM_001003408,uc009xyp.2,uc010qsh.1,uc010qsi.1_5end | |||
|cluster_id=chr10:116444371..116444382,- | |||
|description=CAGE_peak_19_at_ABLIM1_5end | |||
|id=chr10:116444371..116444382,- | |||
|ontology_enrichment_celltype=CL:0002139!6.23e-08!24;CL:0002078!6.08e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.37e-09;3!CL:0000136;8.89e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.40e-09,3;CL:0000136,9.13e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0004140;5.39e-08;1!UBERON:0000358;9.74e-08;1!UBERON:0010227;9.74e-08;1!UBERON:0005062;1.92e-07;4!UBERON:0007284;1.92e-07;4!UBERON:0003124;1.97e-07;1!UBERON:0010115;1.97e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.23e-13;2!DOID:178;1.97e-07;1!DOID:326;1.97e-07;1!DOID:3978;1.97e-07;1!DOID:3394;1.97e-07;1!DOID:5844;1.97e-07;1!DOID:1287;3.03e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.12e-14,2;DOID:178,1.48e-07,1;DOID:326,1.48e-07,1;DOID:3978,1.48e-07,1;DOID:3394,1.48e-07,1;DOID:5844,1.48e-07,1;DOID:1287,2.47e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.08e-39!115;UBERON:0003075!4.70e-11!86;UBERON:0007284!4.70e-11!86;UBERON:0001049!1.14e-10!57;UBERON:0005068!1.14e-10!57;UBERON:0006241!1.14e-10!57;UBERON:0007135!1.14e-10!57;UBERON:0004111!2.69e-10!241;UBERON:0002346!4.06e-10!90;UBERON:0002020!1.39e-09!34;UBERON:0003528!1.39e-09!34;UBERON:0000064!1.78e-09!219;UBERON:0000477!2.49e-09!286;UBERON:0002791!5.23e-09!33;UBERON:0001893!1.32e-08!34;UBERON:0000468!2.57e-08!659;UBERON:0000025!3.10e-08!194;UBERON:0002616!3.28e-08!59;UBERON:0003080!5.91e-08!42;UBERON:0000062!2.20e-07!511;UBERON:0001869!2.86e-07!32;UBERON:0002780!3.53e-07!41;UBERON:0001890!3.53e-07!41;UBERON:0006240!3.53e-07!41;UBERON:0000467!5.27e-07!625;UBERON:0000483!5.31e-07!309;UBERON:0000480!6.09e-07!626;UBERON:0000119!9.17e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002081;4.84e-14;2!UBERON:0007100;7.52e-12;25!UBERON:0003978;1.18e-09;3!UBERON:0004151;1.18e-09;3!UBERON:0000946;1.18e-09;3!UBERON:0003124;1.37e-09;3!UBERON:0000920;1.37e-09;3!UBERON:0002134;5.39e-08;1!UBERON:0005208;5.39e-08;1!UBERON:0004145;5.39e-08;1!UBERON:0005946;5.39e-08;1!UBERON:0005965;5.39e-08;1!UBERON:0002078;5.39e-08;1!UBERON:0000996;6.80e-08;1!UBERON:0002079;9.74e-08;1!UBERON:0002146;9.74e-08;1!UBERON:0005623;9.74e-08;1!UBERON:0002363;1.97e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002081,5.52e-14,2;UBERON:0010227,5.52e-14,2;UBERON:0007100,6.36e-11,27;UBERON:0004151,1.29e-09,3;UBERON:0003978,1.34e-09,3;UBERON:0009751,1.34e-09,3;UBERON:0000946,1.34e-09,3;UBERON:0002523,1.34e-09,3;UBERON:0005983,1.34e-09,3;UBERON:0002165,1.34e-09,3;UBERON:0002062,1.34e-09,3;UBERON:0007280,1.34e-09,3;UBERON:0000920,1.40e-09,3;UBERON:0007023,1.77e-09,114;UBERON:0003124,1.08e-08,7;UBERON:0002134,5.58e-08,1;UBERON:0005208,5.58e-08,1;UBERON:0005946,5.58e-08,1;UBERON:0005965,5.58e-08,1;UBERON:0002078,5.58e-08,1;UBERON:0000996,7.26e-08,1;UBERON:0002079,1.07e-07,1;UBERON:0002146,1.15e-07,1;UBERON:0005623,1.15e-07,1;UBERON:0003103,1.30e-07,68;UBERON:0002363,1.91e-07,1;UBERON:0007645,1.91e-07,1;UBERON:0007647,1.91e-07,1;UBERON:0010115,1.91e-07,1 | |||
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| ||
|short_description=p19@ABLIM1 | |||
}} | }} |
Latest revision as of 13:04, 16 September 2015
Short description: | p19@ABLIM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_ABLIM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_ENST00000369252, ENST00000369267, ENST00000533213, NM_001003407, NM_001003408, uc009xyp.2, uc010qsh.1, uc010qsi.1_5end |
EntrezGene: | ABLIM1 |
HGNC: | 78 |
UniProt: | A6NKJ2F8W8M4B3KSG3B3KVH2O14639 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.40e-09 | 3 |
fat cell | 9.13e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cardiac atrium | 5.52e-14 | 2 |
future cardiac atrium | 5.52e-14 | 2 |
primary circulatory organ | 6.36e-11 | 27 |
cardiac chamber | 1.29e-09 | 3 |
valve | 1.34e-09 | 3 |
cardiac mesenchyme | 1.34e-09 | 3 |
cardial valve | 1.34e-09 | 3 |
tunica intima | 1.34e-09 | 3 |
heart layer | 1.34e-09 | 3 |
endocardium | 1.34e-09 | 3 |
endocardial cushion | 1.34e-09 | 3 |
presumptive endocardium | 1.34e-09 | 3 |
egg chorion | 1.40e-09 | 3 |
adult organism | 1.77e-09 | 114 |
chorion | 1.08e-08 | 7 |
tricuspid valve | 5.58e-08 | 1 |
right atrium valve | 5.58e-08 | 1 |
outflow tract of atrium | 5.58e-08 | 1 |
outflow part of right atrium | 5.58e-08 | 1 |
right cardiac atrium | 5.58e-08 | 1 |
vagina | 7.26e-08 | 1 |
left cardiac atrium | 1.07e-07 | 1 |
pulmonary valve | 1.15e-07 | 1 |
semi-lunar valve | 1.15e-07 | 1 |
compound organ | 1.30e-07 | 68 |
dura mater | 1.91e-07 | 1 |
future meninx | 1.91e-07 | 1 |
ectomeninx | 1.91e-07 | 1 |
future dura mater | 1.91e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 8.12e-14 | 2 |
vascular disease | 1.48e-07 | 1 |
ischemia | 1.48e-07 | 1 |
extrinsic cardiomyopathy | 1.48e-07 | 1 |
myocardial ischemia | 1.48e-07 | 1 |
myocardial infarction | 1.48e-07 | 1 |
cardiovascular system disease | 2.47e-07 | 4 |